Have you followed the instructions in the README 
http://baseplugins.thep.lu.se/browser/plugins/base2/se.lu.thep.affymetrix/tags/0.7/README
 


Do you have an CDF file attached to the design?


Jari


On 2010-12-06 07.56, Irina 264 wrote:
>
>
> I am trying to run the RMAExpress plug-in to import Affymetrix data,
> but I get the following error:
>
> net.sf.basedb.core.InvalidUseOfNullException: Invalid use of null.
> The 'design' value cannot be set to null.
>
> at net.sf.basedb.core.Affymetrix.getCdfFile(Affymetrix.java:126)
>
> at se.lu.thep.affymetrix.RMAExpress.runBinary(RMAExpress.java:131)
>
> at
> se.lu.thep.affymetrix.AbstractExternalBinaryPlugin.run(AbstractExternalBinaryPlugin.java:262)
>
>  at
> net.sf.basedb.core.PluginExecutionRequest.invoke(PluginExecutionRequest.java:116)
>
>  at
> net.sf.basedb.clients.jobagent.executors.ThreadJobExecutor.executeJob(ThreadJobExecutor.java:109)
>
>  at
> net.sf.basedb.clients.jobagent.executors.ThreadJobExecutor.main(ThreadJobExecutor.java:202)
>
>
>
> I'm running BASE in a Linux Fedora11 with MySQL, tomcat6 Where is the
> problem?

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