jesse paquette wrote:
>  > >>> Ok, I deleted the extra line at the end of the show_exception 
> file. The
>  > >> new
>  > >>> error message is:
>  > >>>
>  > >>> File creation in base.config[userfiles] failed
>  > >> There can be two reasons:
>  > >>
>  > >> 1) The path specified in base.config for the userfiles property 
> doesn't
>  > >> exists
>  > >> 2) The user that Tomcat runs as doesn't have permission to create new
>  > >> files in that directory
>  > >
>  > > I'm guessing it's 1)
>  > >
>  > > I changed the Tomcat configuration to run as a user with the proper
>  > > permissions. However, the directory specified by the 
> base.config[userfiles]
>  > > variable exists. So, I'm rather stuck here.
>  >
>  > Can you submit the entire stacktrace? If it is not 1 or 2 there might be
>  > some information about what the problem is.
> 
> Here it is.  

Hmmm... It doesn't give any more information. For some reason BASE can't 
create files on the file system. The only reasons I know of are 1) and 
2) mentioned earlier.


 > By the way, do I need to configure a "Reporter Map
> Importer" for Affymetrix .cdf files?  

No, just attach the CDF to an array design.

 > There isn't any information for
> that in the 2.1 getting started manual 
> (http://base.thep.lu.se/chrome/site/doc/user/getting_started.html, 
> "Reporter Map Importer").  There's only information there for Genepix files.


/Nicklas

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