Bob MacCallum wrote:
>  > 
>  > > We have to inherit from just one of the two biosources because BASE
>  > > doesn't know which is experimental (ch1) and which is control (ch2).
>  > > BASE will later choose one arbitrarily (in Experiment Explorer for
>  > > example).
>  > 
>  > No, this was a bug that was fixed in BASE 2.5. Since then, all inherited 
>  > annotations are displayed and can be used in the analysis.
> 
> Oops, sorry for spreading misinformation.  We've only inherited from one
> biosource for a long time now, so never experienced that fix.  We'll continue
> to inherit from just the experimental biosource because we use that
> inheritance to flag the ch1 sample (detected by our code which we run on top
> of BASE).

It may actually be a little easier to first use the auto-inherit 
function even if you get duplicates. That is because you can then use 
the "Experiment overview" to see all duplicates and there are 
"quick-links" to access the annotations/inherited annotations dialog for 
all items that makes it relatively easy to remove the duplicate 
annotations (compared to manually adding only the correct annotations in 
the first place) .

/Nicklas

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