> -----Original Message----- > From: Nicklas Nordborg [mailto:[EMAIL PROTECTED] > Sent: 21 November 2008 11:54 > To: BASE ML > Subject: Re: [base] mass annotation of raw bioassays in BASE 2.8.4 -- > problem with name/ID mapping >
[...] > There is a new function in BASE 2.9 that can make this easier > (http://base.thep.lu.se/ticket/1133). First, you need to put the raw > bioassays in an experiment and select experimental factors (=annotation > types) for it. > > When this has been done, you can access a function on the experiment's > "Properties" page that automatically inherits all annotations for the > experimental factors. After this you may want to check out the > "Experiment overview" page to find annotations that have been inherited > multiple times. This happens if there is more than one parent item that > has annotation values for the same annotation type. > > /Nicklas I have just installed BASE 2.9 and I am trying to get this new functionality to work but there does not seem to be any clickable link for this. On the properties page of my experiment it says, next to the yellow warning triangle: "Some raw bioassays are missing this factor value; click to automatically try to inherit annotations from parents" but there does not seem to be anything clickable. I am probably missing something here... Cheers Micha ================================== Dr Micha M Bayer Bioinformatics Specialist Genetics Programme The Scottish Crop Research Institute Invergowrie Dundee DD2 5DA Scotland, UK Telephone +44(0)1382 562731 ext. 2309 Fax +44(0)1382 562426 http://www.scri.ac.uk/staff/michabayer ================================== ______________________________________________________________________ SCRI, Invergowrie, Dundee, DD2 5DA. The Scottish Crop Research Institute is a charitable company limited by guarantee. Registered in Scotland No: SC 29367. Recognised by the Inland Revenue as a Scottish Charity No: SC 006662. DISCLAIMER: This email is from the Scottish Crop Research Institute, but the views expressed by the sender are not necessarily the views of SCRI and its subsidiaries. This email and any files transmitted with it are confidential to the intended recipient at the e-mail address to which it has been addressed. It may not be disclosed or used by any other than that addressee. If you are not the intended recipient you are requested to preserve this confidentiality and you must not use, disclose, copy, print or rely on this e-mail in any way. Please notify [EMAIL PROTECTED] quoting the name of the sender and delete the email from your system. Although SCRI has taken reasonable precautions to ensure no viruses are present in this email, neither the Institute nor the sender accepts any responsibility for any viruses, and it is your responsibility to scan the email and the attachments (if any). ______________________________________________________________________ ------------------------------------------------------------------------- This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK & win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100&url=/ _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to [EMAIL PROTECTED]
