On Wed, Jan 5, 2011 at 12:45 PM, Ivan Gregoretti <[email protected]> wrote:
> It works. Thanks, Martin. > > It would be nice to have a pointer to this functionality in the > documentation. For instance, when I do ?RangedData, I can see a > RangedData constructor and coercion options. However, ?RangedDataList > reports its constructor but no coercion. > > It's not a coercion in the strict sense. The rbind method is documented for RangedData. Also, RangedDataList has a stack method for rbind'ing them and adding a factor column indicating the source of each record. The "unlist" method on RangedDataList is a bit strange: it does a do.call(c, list) instead of do.call(rbind, list). I'm thinking about changing that. Michael > Again, thank you. > > Ivan > > > > > On Wed, Jan 5, 2011 at 3:23 PM, Martin Morgan <[email protected]> wrote: > > On 01/05/2011 12:12 PM, Ivan Gregoretti wrote: > >> Hello BioC listers, > >> > >> Is there a function that will take a list of RangedData instances and > >> consolidate them into a large RangedData instance? > > > > do.call(rbind, LargeListOfSmallRangedData) > > > > ? > > Martin > >> > >> I'm looking for this: > >> > >> bigRangedData <- someFunction( LargeListOfSmallRangedData ) > >> > >> Thank you, > >> > >> Ivan > >> > >> _______________________________________________ > >> Bioc-sig-sequencing mailing list > >> [email protected] > >> https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing > > > > > > -- > > Computational Biology > > Fred Hutchinson Cancer Research Center > > 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109 > > > > Location: M1-B861 > > Telephone: 206 667-2793 > > > > _______________________________________________ > Bioc-sig-sequencing mailing list > [email protected] > https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing > [[alternative HTML version deleted]] _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
