On Fri, Jan 7, 2011 at 6:40 AM, Ivan Gregoretti <[email protected]> wrote:
> Hello Steve, > > I tried your suggestion but I get: > > stack(RangedDataList(LargeListOfSmallRangedData), indName='space') > Error in `[[<-`(`*tmp*`, indName, value = c(1L, 1L, 1L, 1L, 1L, 2L, 2L, : > cannot replace "space" information > > I have the latest R dev and BioC dev packages. So, I will settle for > do.call. Thank you for the suggestion. > > Hi Ivan, In your case, it's probably best to use unlist() on the RangedDataList, since each element is coming from a separate space. Michael > Ivan > > > > > > On Thu, Jan 6, 2011 at 11:47 AM, Steve Lianoglou > <[email protected]> wrote: > > Hi, > > > > On Thu, Jan 6, 2011 at 11:21 AM, Ivan Gregoretti <[email protected]> > wrote: > >> I assumed that RangedDataList was the same as "list of RangedData". > >> > >> at the moment I can't coerce one into the other: > >> > >> as(LargeListOfSmallRangedData,'RangedDataList') > >> Error in as(LargeListOfSmallRangedData, "RangedDataList") : > >> no method or default for coercing "list" to "RangedDataList" > > > > Try: > > > > R> rdl <- RangedDataList(LargeListOfSmallRangedData) > > > > -steve > > > > -- > > Steve Lianoglou > > Graduate Student: Computational Systems Biology > > | Memorial Sloan-Kettering Cancer Center > > | Weill Medical College of Cornell University > > Contact Info: > > http://cbio.mskcc.org/~lianos/contact<http://cbio.mskcc.org/%7Elianos/contact> > > > [[alternative HTML version deleted]] _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
