I think I am on the same page as everyone here. But I still get: >java -cp xerces.jar:biojava.jar -jar MotifSearch.jar Exception in thread "main" java.lang.NoClassDefFoundError: org/biojava/bio/BioException
More info: [EMAIL PROTECTED]:~/ext> pwd /uufs/inscc.utah.edu/common/home/ahammer/ext [EMAIL PROTECTED]:~/ext> [EMAIL PROTECTED]:~/ext> echo $CLASSPATH .:/uufs/inscc.utah.edu/common/home/ahammer/ext/ [EMAIL PROTECTED]:~/ext> [EMAIL PROTECTED]:~/ext> ls -l total 4772 -rw-r--r-- 1 ahammer gestelan 2674782 2003-10-15 10:37 biojava.jar -rw-r--r-- 1 ahammer gestelan 93463 2003-10-07 17:59 bytecode.jar -rw-r--r-- 1 ahammer gestelan 30117 2003-10-07 17:59 commons-cli.jar -rw-r--r-- 1 ahammer gestelan 145563 2003-10-15 10:04 grammars.jar -rw-r--r-- 1 ahammer gestelan 46056 2003-10-07 17:59 htmlparser.jar -rw-r--r-- 1 ahammer gestelan 50962 2005-02-10 11:38 MotifSearch.jar -rw-r--r-- 1 ahammer gestelan 1808885 2005-02-11 11:55 xerces.jar [EMAIL PROTECTED]:~/ext> I don't understard why this doesn't work. It works fine on a windows box. It makes me think it wouldn't work even if I had access to the jre/ext directory. Andy __________________________________ Do you Yahoo!? Yahoo! Mail - Easier than ever with enhanced search. Learn more. http://info.mail.yahoo.com/mail_250 _______________________________________________ Biojava-l mailing list - Biojava-l@biojava.org http://biojava.org/mailman/listinfo/biojava-l