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Dear all, I am refining my model with 2.0A using CNS. I have fitted most
of the protein sequence into the model (150 of 160 aa). I also added 100 water
molecules into the model. The final R and Rfree factor are about 26% and 28%,
respectively. I am wondering why I can not refine my model to low R and Rfree
factors below 25%. The geometry of my final model is very good. 96%
residues are in most favorable region. I think my data is quite good. I/sigma(unaverage) and
completeness at highest resolution shell is 2.3 and 99%. Rmerge is about 6%. Redundancy
is about 5. Is my model acceptable based on the R and Rfree factors? Is
there any reason for the high R and Rfree factors? Thanks! Best, Mousheng Wu, Institute of Molecular and Cell
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- [ccp4bb]: R and Rfree factor for 2.0 A model Wu Mousheng
- Re: [ccp4bb]: R and Rfree factor for 2.0 A mode... S.G. Jackson
- Re: [ccp4bb]: R and Rfree factor for 2.0 A ... Raji Edayathumangalam
- [ccp4bb]: Best practice for solvent-flattening ... Phil Jeffrey
- Re: [ccp4bb]: Best practice for solvent-fla... William Scott
- Re: [ccp4bb]: Best practice for solvent-fla... Bart Hazes
- Re: [ccp4bb]: Best practice for solvent-fla... Peter Adrian Meyer
- Re: [ccp4bb]: Best practice for solvent-fla... Dirk Kostrewa
- Re: [ccp4bb]: Best practice for solvent-fla... Karsten Niefind
- Re: [ccp4bb]: R and Rfree factor for 2.0 A mode... Juergen Bosch
- Re: [ccp4bb]: R and Rfree factor for 2.0 A mode... Brad Bennett
