Hi Nat,
Whichever way the input file for the run is prepared (via GUI or command line), anybody who doesn't inspect the log file at the end of the run is doomed and bound to commit senseless errors. I was taught a long time ago that computers always do what you
told them to do and not what you think you told them, which is why inspecting the log file helps. BTW, I find the GUI's (ccp4i or phenix) as great help in preparing the command file, certainly the skeleton which can then be modified and run via the command
line if needed.
Cheers,
Boaz
Boaz Shaanan, Ph.D.
Dept. of Life Sciences Ben-Gurion University of the Negev Beer-Sheva 84105 Israel E-mail: bshaa...@bgu.ac.il Phone: 972-8-647-2220 Skype: boaz.shaanan Fax: 972-8-647-2992 or 972-8-646-1710 From: CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of Nat Echols [nathaniel.ech...@gmail.com]
Sent: Friday, April 12, 2013 8:38 PM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] CCP4 Update victim of own success On Fri, Apr 12, 2013 at 10:27 AM, James Holton <jmhol...@lbl.gov> wrote:
This is a very defensible position with regards to your normal workflow (or mine) - but beamline scientists (or software developers) are not very representative of crystallographers as a group. I've seen a lot of reflexive anti-GUI mentality from users
who don't fall into either category, presumably because a senior postdoc or PI told them "real crystallographers use the command line", when in reality they'd be better served by figuring out on their own what workflow is most efficient for them.
-Nat
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- Re: [ccp4bb] CCP4 Update victim of own success eugene . krissinel
- Re: [ccp4bb] CCP4 Update victim of own success Tim Wiegels
- Re: [ccp4bb] CCP4 Update victim of own success Felix Frolow
- Re: [ccp4bb] CCP4 Update victim of own suc... Jim Pflugrath
- Re: [ccp4bb] CCP4 Update victim of own suc... Herman . Schreuder
- Re: [ccp4bb] CCP4 Update victim of own suc... James Holton
- Re: [ccp4bb] CCP4 Update victim of own suc... Nat Echols
- Re: [ccp4bb] CCP4 Update victim of own suc... James Holton
- Re: [ccp4bb] CCP4 Update victim of own suc... eugene . krissinel
- Re: [ccp4bb] CCP4 Update victim of own suc... James Stroud
- Re: [ccp4bb] CCP4 Update victim of own suc... Boaz Shaanan
- Re: [ccp4bb] CCP4 Update victim of own suc... Nat Echols
- Re: [ccp4bb] CCP4 Update victim of own suc... Ed Pozharski
- Re: [ccp4bb] CCP4 Update victim of own success Dale Tronrud
- Re: [ccp4bb] CCP4 Update victim of own success eugene . krissinel
- Re: [ccp4bb] CCP4 Update victim of own success Antony Oliver
- Re: [ccp4bb] CCP4 Update victim of own suc... eugene . krissinel
- Re: [ccp4bb] CCP4 Update victim of own suc... Ethan Merritt
- Re: [ccp4bb] CCP4 Update victim of own suc... Roger Rowlett
- Re: [ccp4bb] CCP4 Update victim of own suc... David Schuller
- Re: [ccp4bb] CCP4 Update victim of own suc... Ethan Merritt