haddock may be an appropriate tool
https://haddock.science.uu.nl/
On 26/1/2018 8:34 PM, Thomas Krey wrote:
Dear colleagues,
Is there any appropriate tool for docking an interacting protein to a
relatively large protein-protein interface (>2500 A2). We are facing a
hetero-oligomer for which we approximately know the interfaces as well
as the structures of the individual protomers and would like to model
the hetero-oligomer. I have done some small molecule docking before,
but the size of the interface seem to be prohibitive for using the
same tools in the case of such a protein-protein interaction.
Any help or suggestion would be highly appreciated.
Best wishes
Thomas
