Hi Paul,

Thank you for your timely response. However, I can’t reinstall coot right now. 
It said not to be found.


Warning: No available formula with the name "./coot.rb".
==> Searching for similarly named formulae...
Error: No similarly named formulae found.
==> Searching for a previously deleted formula (in the last month)...
Error: No previously deleted formula found.

Thanks,
Chen
From: Paul Emsley <pems...@mrc-lmb.cam.ac.uk>
Date: Saturday, June 25, 2022 at 4:47 PM
To: Sun, Chen <su...@wustl.edu>, COOT@JISCMAIL.AC.UK <COOT@JISCMAIL.AC.UK>
Subject: Re: Mac Coot 1.0.06-pre mutate sequence not working
* External Email - Caution *


On 25/06/2022 17:57, Sun, Chen wrote:
Hi Paul,

Now the copy molecule is not working. The save coordinate also failed to launch 
after I have mutated a long sequence.


OK, copy_molecule is fixed.


It doesn’t allow me to save the session. Please see the error message below.



on_glarea_key_press_notify() key not found in map: 65505

debug:: safe_python_command() PyRun_SimpleString() import coot_gui; 
coot_gui.molecule_chooser_gui("Molecule to Copy...", lambda imol: 
coot.copy_molecule(imol))

Selected: imol=<gi.overrides.Gtk.TreeModelRow object at 0x145337f70>

Traceback (most recent call last):

  File 
"/opt/homebrew/Cellar/python@3.9/3.9.13_1/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/coot/coot_gui.py"<mailto:/opt/homebrew/Cellar/python@3.9/3.9.13_1/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/coot/coot_gui.py>,
 line 931, in on_ok_button_clicked

    callback_function(imol_model)

  File "<string>", line 1, in <lambda>

NameError: name 'coot' is not defined

Traceback (most recent call last):

  File 
"/opt/homebrew/Cellar/python@3.9/3.9.13_1/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/coot/coot_gui.py"<mailto:/opt/homebrew/Cellar/python@3.9/3.9.13_1/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/coot/coot_gui.py>,
 line 931, in on_ok_button_clicked

    callback_function(imol_model)

  File "<string>", line 1, in <lambda>

NameError: name 'coot' is not defined



OK, save state dialog is fixed now also. Same deal to install of course.

Alternatively, use Ctrl-S to save the session.

Thanks,

Paul.



________________________________
The materials in this message are private and may contain Protected Healthcare 
Information or other information of a sensitive nature. If you are not the 
intended recipient, be advised that any unauthorized use, disclosure, copying 
or the taking of any action in reliance on the contents of this information is 
strictly prohibited. If you have received this email in error, please 
immediately notify the sender via telephone or return mail.

########################################################################

To unsubscribe from the COOT list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1

This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list 
hosted by www.jiscmail.ac.uk, terms & conditions are available at 
https://www.jiscmail.ac.uk/policyandsecurity/

Reply via email to