Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
b5f36ade by Andreas Tille at 2020-02-26T01:45:50+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Tue, 25 Feb 2020 13:42:03 +0000
+Last-Update: Wed, 26 Feb 2020 01:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Tue, 25 Feb 2020 13:42:04 +0000
+Last-Update: Wed, 26 Feb 2020 01:42:03 +0000
source | version |
upstream_version | uploaders
| Last uploader | Last uploaded
-------------------------------+---------------------------------+---------------------------------+-----------------------------------------------------------------------------+----------------------+------------------------
@@ -7,7 +7,6 @@ Last-Update: Tue, 25 Feb 2020 13:42:04 +0000
atropos | 1.1.24 |
2.0.0-alpha.4 | Andreas Tille
| Steffen Moeller | 2019-11-30 12:19:31+00
baitfisher | 1.2.7+git20180107.e92dbf2 |
1.2.7+git20190123.241d060 | Olivier Sallou
| Andreas Tille | 2018-09-24 13:04:18+00
bbmap | 38.73 | 38.79
| Andreas Tille
| Andreas Tille | 2019-11-22 21:04:16+00
- bcbio | 1.1.9 | 1.2.0
| Steffen Moeller
| Michael R. Crusoe | 2020-02-14 17:19:16+00
beast2-mcmc | 2.6.0 | 2.6.1
| Andreas Tille,Olivier Sallou
| Andreas Tille | 2019-07-31 13:08:02+00
biobambam2 | 2.0.153 | 2.0.156+ds
| Andreas Tille
| Andreas Tille | 2020-02-05 13:20:41+00
biojava-live | 1.7.1 | 1.9.3
| Andreas Tille,Olivier Sallou,Steffen Moeller
| Andreas Tille | 2018-11-12 15:49:23+00
@@ -18,7 +17,6 @@ Last-Update: Tue, 25 Feb 2020 13:42:04 +0000
charls | 2.0.0 | 2.1.0
| Andreas Tille
| Andreas Tille | 2019-01-10 20:10:56+00
clonalframeml | 1.11 | 1.12
| Andreas Tille
| Andreas Tille | 2019-05-23 07:03:34+00
cwltool | 2.0.20200126090152 |
2.0.20200219182542 | Michael R. Crusoe
| Michael R. Crusoe | 2020-02-14 12:34:12+00
- cyvcf2 | 0.11.5 | 0.11.6
| Liubov Chuprikova,Steffen Moeller
| Michael R. Crusoe | 2020-02-18 15:49:35+00
dcm2niix | 1.0.20181125 |
1.0.20190902 | Ghislain Antony Vaillant
| Andreas Tille | 2019-01-30 10:04:52+00
ea-utils | 1.1.2 | 1.04.807
| Andreas Tille,Tim Booth
| Andreas Tille | 2018-04-26 21:48:01+00
elastix | 4.9.0 | 5.0.0
| Gert Wollny,Steve M. Robbins
| Andreas Tille | 2019-01-15 11:50:11+00
@@ -65,7 +63,6 @@ Last-Update: Tue, 25 Feb 2020 13:42:04 +0000
python-cobra | 0.14.2 | 0.17.1
| Afif Elghraoui
| Liubov Chuprikova | 2019-03-02 06:49:44+00
python-colormap | 1.0.2 | 1.0.3
| Andreas Tille
| Andreas Tille | 2019-12-06 16:51:43+00
python-pbcommand | 1.1.1+git20191122.ec024c3 |
1.1.1+git20200211.116b09f | Andreas Tille
| Andreas Tille | 2019-12-19 08:42:03+00
- python-pbcore | 1.7.1+git20200129.c55621e |
1.7.1+git20200206.d66cbbf | Andreas Tille
| Andreas Tille | 2020-01-31 16:20:15+00
python-pymummer | 0.10.3 | 0.11.0
| Afif Elghraoui
| Andreas Tille | 2019-01-07 09:06:07+00
python-schema-salad | 5.0.20200126033820 |
5.0.20200220195218 | Michael R. Crusoe
| Michael R. Crusoe | 2020-02-14 12:34:49+00
python-treetime | 0.7.1 | 0.7.4
| Andreas Tille
| Steffen Moeller | 2020-01-18 20:52:48+00
@@ -83,7 +80,7 @@ Last-Update: Tue, 25 Feb 2020 13:42:04 +0000
unanimity | 3.3.0 | 4.2.0
| Afif Elghraoui,Andreas Tille
| Adrian Bunk | 2019-02-06 07:34:42+00
vsearch | 2.14.1 | 2.14.2
| Andreas Tille,Tim Booth
| Andreas Tille | 2019-12-17 10:07:09+00
xmedcon | 0.16.1 | 0.16.2
| Andreas Tille,Roland Marcus Rutschmann
| Andreas Tille | 2019-01-25 18:23:59+00
-(81 rows)
+(78 rows)
source | id | severity |
title
@@ -234,7 +231,6 @@ Last-Update: Tue, 25 Feb 2020 13:42:04 +0000
pynast | 948081 | serious | pynast build depends on
and recommends the removed blast2 transitional package
python-biom-format | 820060 | normal | python-biom-format:
broken on big-endian architectures
python-biom-format | 950929 | normal | python-biom-format:
FTBFS with pandas 1.0: test failures
- python-cobra | 951690 | serious | src:python-cobra: fails
to migrate to testing for too long
python-cogent | 950474 | important | python-cogent FTBFS on
armel and i386: test failures
python-intervaltree-bio | 920545 | serious | python-intervaltree
breaks python-intervaltree-bio autopkgtest
python-mne | 733270 | wishlist | please provide
python-mne-doc package
@@ -271,6 +267,9 @@ Last-Update: Tue, 25 Feb 2020 13:42:04 +0000
sofa-framework | 735099 | normal | sofa-framework: FTBFS on
sparc, powerpc (and ia64)
sofa-framework | 875184 | serious | [sofa-framework] Future
Qt4 removal from Buster
spades | 853113 | normal | spades: Fails to build
with unhelpful error message in a "low" memory machine
+ spdlog | 951960 | serious | purify: FTBFS: ld:
../purify/libpurify.so.2.0.0: undefined reference to
`fmt::v6::internal::basic_data<void>::signs'
+ spdlog | 951995 | serious | sopt: FTBFS: core.h:266:
undefined reference to `fmt::v6::internal::assert_fail(char const*, int, char
const*)'
+ spdlog | 952543 | serious | Using old libfmt breaks
sopt and purify
sprai | 943280 | normal | sprai: Python2 removal
in sid/bullseye
sra-sdk | 943231 | normal | sra-sdk: Python2 removal
in sid/bullseye
sumaclust | 952093 | serious | sumaclust: FTBFS:
mtcompare_sumaclust.c:18:10: fatal error: libfasta/sequence.h: No such file or
directory
@@ -284,5 +283,5 @@ Last-Update: Tue, 25 Feb 2020 13:42:04 +0000
xmedcon | 671828 | normal | xmedcon: Cannot open
file with YBR photometric interpretation
xmedcon | 779707 | normal | Errors when reading
dicomdir file: "No images found" / "Loading: DICM Error reading file"
xmedcon | 924017 | normal | desktop entry
-(196 rows)
+(198 rows)
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/b5f36ade774a89883615bb5552dee6f28f6f3a8b
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/b5f36ade774a89883615bb5552dee6f28f6f3a8b
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