Thanks Sebastien for your so fast reply. You made my day !!
cheers Mathieu Mathieu Bourgey, PhD Spécialiste Bioinformatique Centre d'innovation Génome Québec On 13-02-21 11:48 AM, Sébastien Boisvert wrote: > Hi, > > On 02/21/2013 11:32 AM, Mathieu Bourgey wrote: >> Hi Sebastien, >> >> I would like to try the -gene-ontology option of ray, but I didn't find >> in the in the http://www.ebi.ac.uk/GOA/ a file that contains both the >> embl_CDS and the GO IDs that I could use to generate the annotation file >> needed for this option. >> Perhaps I miss something in the website or I missunderstood what the >> annotation file should be ! >> >> Could give me more details on how I can generate the annotation file ? > There is a tool to automate this process for you and its available in this > repository: > > https://github.com/sebhtml/Paper-Replication-2012/tree/master/Build-Input-Files-for-Gene-Ontology > > This was a requirement of the Editor at Genome Biology. > >> Thanks in advance >> >> Mathieu >> > > ------------------------------------------------------------------------------ > Everyone hates slow websites. So do we. > Make your web apps faster with AppDynamics > Download AppDynamics Lite for free today: > http://p.sf.net/sfu/appdyn_d2d_feb > _______________________________________________ > Denovoassembler-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/denovoassembler-users > ------------------------------------------------------------------------------ Everyone hates slow websites. So do we. Make your web apps faster with AppDynamics Download AppDynamics Lite for free today: http://p.sf.net/sfu/appdyn_d2d_feb _______________________________________________ Denovoassembler-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/denovoassembler-users
