That looks like a good idea. Do you know maybe how to make dolfin accessible through jupyterhub? I got my engines working within virtual_environment ( I can import ufc, ffc, ply, etc).
But without sourcing /home/rskolasinski/opt/fenics//fenics.conf I can't import dolfin. 2015-06-27 20:00 GMT+02:00 Jan Blechta <[email protected]>: > On Sat, 27 Jun 2015 19:53:11 +0200 > Julian Andrej <[email protected]> wrote: > > > I can do a writeup on the procedure. If this is going to be published, > > maybe there is a style guide or template I can use? > > You could possibly fit it into http://fenicsproject.org/download and > make a pull request > https://bitbucket.org/fenics-project/fenics-web/pull-requests > > Jan > > > > > On Sat, Jun 27, 2015 at 7:23 PM, Rafał Skolasiński > > <[email protected]> wrote: > > > Hi Guys, > > > > > > Is anyone going to do some tutorial / wiki / page about how to > > > finally install dolfin inside virtual environment without problems > > > and polluting global installation? > > > It would be super useful. > > > > > > Best, > > > Rafal > > > > > > 2015-06-22 17:26 GMT+02:00 Julian Andrej <[email protected]>: > > >> > > >> With the prefix option it works flawlessly. > > >> > > >> Maybe this installation method should be noted on the webpage, > > >> because it is way easier than any other method besides a > > >> distribution package. > > >> > > >> On Mon, Jun 22, 2015 at 9:00 AM, Johannes Ring <[email protected]> > > >> wrote: > > >> > The problem is that FFC assumes that it will be installed > > >> > in /usr/local if > > >> > no --prefix option is given, so you end up with the wrong path to > > >> > UseUFC.cmake in dolfin-1.5-venv/share/ufc/UFCConfig.cmake. You > > >> > can fix this > > >> > by running pip with the --prefix option like this: > > >> > > > >> > pip install --install-option="--prefix=$VIRTUAL_ENV" > > >> > https://bitbucket.org/fenics-project/ffc/downloads/ffc-1.5.0.tar.gz > > >> > > > >> > I am tempted to revert > > >> > https://bitbucket.org/fenics-project/ffc/commits/12cb900, which > > >> > should fix > > >> > this problem. Using sys.prefix as default is better than > > >> > hard-coding it to > > >> > /usr/local IMO. > > >> > > > >> > Johannes > > >> > > > >> > > > >> > On Sun, Jun 21, 2015 at 12:11 PM Julian Andrej > > >> > <[email protected]> wrote: > > >> >> > > >> >> My whole installation process is the following > > >> >> > > >> >> $ virtualenv dolfin-1.5-venv > > >> >> $ source dolfin-1.5-venv/bin/activate > > >> >> $ pip install numpy sympy six ply > > >> >> $ pip install > > >> >> > https://bitbucket.org/fenics-project/ufl/downloads/ufl-1.5.0.tar.gz > > >> >> $ pip install > > >> >> > > >> >> > https://bitbucket.org/fenics-project/instant/downloads/instant-1.5.0.tar.gz > > >> >> $ pip install > > >> >> > https://bitbucket.org/fenics-project/fiat/downloads/fiat-1.5.0.tar.gz > > >> >> $ pip install > > >> >> > https://bitbucket.org/fenics-project/ffc/downloads/ffc-1.5.0.tar.gz > > >> >> > > >> >> None of these tell me ANY errors. I go on with > > >> >> > > >> >> $ wget > > >> >> > > >> >> > https://bitbucket.org/fenics-project/dolfin/downloads/dolfin-1.5.0.tar.gz > > >> >> $ tar xzvf dolfin-1.5.0.tar.gz > > >> >> $ cd dolfin-1.5.0/ > > >> >> $ mkdir build > > >> >> $ cd build > > >> >> $ cmake -DCMAKE_INSTALL_PREFIX=$VIRTUAL_ENV .. > > >> >> $ make -j5 install > > >> >> > > >> >> Again, no errors i can spot! > > >> >> > > >> >> Then I am advised to source a PATH config > > >> >> > > >> >> $ source > > >> >> /home/$USERNAME/dev/fenics/dolfin-1.5-venv/share/dolfin/dolfin.conf > > >> >> > > >> >> on running an example i get this: > > >> >> > > >> >> $ cat > > >> >> > > >> >> > /home/$USERNAME/.instant/error/ffc_form_ce4f228b8aea5046137150d0bd433bb69019d720/compile.log > > >> >> -- The C compiler identification is GNU 4.8.4 > > >> >> -- The CXX compiler identification is GNU 4.8.4 > > >> >> -- Check for working C compiler: /usr/bin/cc > > >> >> -- Check for working C compiler: /usr/bin/cc -- works > > >> >> -- Detecting C compiler ABI info > > >> >> -- Detecting C compiler ABI info - done > > >> >> -- Check for working CXX compiler: /usr/bin/c++ > > >> >> -- Check for working CXX compiler: /usr/bin/c++ -- works > > >> >> -- Detecting CXX compiler ABI info > > >> >> -- Detecting CXX compiler ABI info - done > > >> >> CMake Error at CMakeLists.txt:12 (INCLUDE): > > >> >> include could not find load file: > > >> >> > > >> >> /usr/local/share/ufc/UseUFC.cmake > > >> >> > > >> >> > > >> >> -- Found SWIG: /usr/bin/swig (found version "2.0.11") > > >> >> -- Configuring incomplete, errors occurred! > > >> >> See also > > >> >> > > >> >> > "/tmp/tmpCCDOAD2015-6-19-20-11_instant_21bbb301d6140c6ed460db266a76cff13c305980/ffc_form_ce4f228b8aea5046137150d0bd433bb69019d720/CMakeFiles/CMakeOutput.log". > > >> >> > > >> >> > > >> >> > > >> >> On Sat, Jun 20, 2015 at 9:58 AM, Johannes Ring > > >> >> <[email protected]> wrote: > > >> >> > Try to install FFC again and see if you can spot any errors. > > >> >> > > > >> >> > Johannes > > >> >> > > > >> >> > On Fri, Jun 19, 2015 at 9:55 PM Julian Andrej > > >> >> > <[email protected]> wrote: > > >> >> >> > > >> >> >> Hello, > > >> >> >> > > >> >> >> i installed the dolfin-tools (ufl/ufc/ffc/instant) into a > > >> >> >> virtualenv. > > >> >> >> On running an example i get the following error > > >> >> >> > > >> >> >> -- Detecting CXX compiler ABI info > > >> >> >> -- Detecting CXX compiler ABI info - done > > >> >> >> CMake Error at CMakeLists.txt:12 (INCLUDE): > > >> >> >> include could not find load file: > > >> >> >> > > >> >> >> /usr/local/share/ufc/UseUFC.cmake > > >> >> >> > > >> >> >> which corresponds to a Debian Bugreport (see > > >> >> >> https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=782317) > > >> >> >> > > >> >> >> I installed everything via pip for example with > > >> >> >> > > >> >> >> pip install > > >> >> >> > > >> >> >> > > >> >> >> > https://bitbucket.org/fenics-project/instant/downloads/instant-1.5.0.tar.gz > > >> >> >> > > >> >> >> Dolfin is installed via > > >> >> >> > > >> >> >> mkdir build > > >> >> >> cd build > > >> >> >> cmake -DCMAKE_INSTALL_PREFIX=$VIRTUAL_ENV .. > > >> >> >> make -j5 install > > >> >> >> > > >> >> >> I cannot build the current git versions (master branches) > > >> >> >> because dolfin compilation fails with > > >> >> >> In file included from > > >> >> >> > > >> >> >> > > >> >> >> > > >> >> >> > /home/****/dev/fenics/fenics-project-dolfin-7ca3fda8087c/dolfin/multistage/PointIntegralSolver.cpp:38:0: > > >> >> >> > > >> >> >> > > >> >> >> > > >> >> >> > /home/atomic/dev/fenics/fenics-project-dolfin-7ca3fda8087c/dolfin/fem/UFC.h:130:33: > > >> >> >> error: ‘vertex_integral’ is not a member of ‘ufc’ > > >> >> >> _______________________________________________ > > >> >> >> fenics-support mailing list > > >> >> >> [email protected] > > >> >> >> http://fenicsproject.org/mailman/listinfo/fenics-support > > >> >> _______________________________________________ > > >> >> fenics-support mailing list > > >> >> [email protected] > > >> >> http://fenicsproject.org/mailman/listinfo/fenics-support > > >> _______________________________________________ > > >> fenics-support mailing list > > >> [email protected] > > >> http://fenicsproject.org/mailman/listinfo/fenics-support > > > > > > > > _______________________________________________ > > fenics-support mailing list > > [email protected] > > http://fenicsproject.org/mailman/listinfo/fenics-support > >
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