It's kind of a cosmic yolk.

On Fri, Jul 9, 2010 at 4:47 PM, Shawn Barr <[email protected]> wrote:

> Ted,
>
> I'm confused.  Why would a genetic algorithm ever select a hen that
> produces fewer eggs over a hen that produces more eggs?
>
>
> Shawn
>
>
> On Fri, Jul 9, 2010 at 2:57 PM, Ted Carmichael <[email protected]> wrote:
>
>> Nick, this is perfect.  Thank you!
>>
>> BTW - the reason for this request is, my advisor and I were asked to write
>> a chapter on Complex Adaptive Systems, for a cognitive science textbook.  In
>> it, I talk briefly about GA, and put this story about the chickens in
>> because I thought it was a neat example.
>>
>> I'll add the references now.  Much appreciated.
>>
>> -t
>>
>> On Fri, Jul 9, 2010 at 12:28 PM, Nicholas Thompson <
>> [email protected]> wrote:
>>
>>>  Ted,
>>>
>>> Ok.  So, if I am correct,  this was an actual EXPERIMENT done by two
>>> researchers at Indiana University, I think.  As  I "tell" the "story", it
>>> was the practice to use individual selection to identify the most productive
>>> chickens, but the egg production method involved crates of nine chickens.
>>> The individual selection method inadvertently selected for the most
>>> aggressive chickens, so that once you threw them together in crates of nine,
>>> it would be like asking nine prom queens to work together in a tug of war.
>>> The chickens had to be debeaked or they would kill each other.  So, the
>>> researchers started selection for the best producing CRATES of chickens.
>>> Aggression went down, mortality went down, crate production went up, and
>>> debeaking became unnecessary.
>>>
>>> The experiment is described in Sober and Wilson's UNTO OTHERS or Wilson's
>>> EVOLUTION FOR EVERYBODY,  which are  safely tucked away in my book case 2000
>>> miles away in Santa Fe.   Fortunately, it is also described in
>>>
>>> Dave Wilson's blog
>>> http://www.huffingtonpost.com/david-sloan-wilson/truth-and-reconciliation_b_266316.html
>>>
>>> Here is the original reference:
>>>
>>> GROUP SELECTION FOR ADAPTATION TO MULTIPLE-HEN CAGES : SELECTION PROGRAM
>>> AND DIRECT RESPONSES
>>> Auteur(s) / Author(s)
>>> MUIR W. 
>>> M.<http://www.refdoc.fr/?traduire=en&FormRechercher=submit&FormRechercher_Txt_Recherche_name_attr=auteursNom:%20%28MUIR%29>;
>>> Revue / Journal Title
>>> Poultry 
>>> science<http://www.refdoc.fr/?traduire=en&FormRechercher=submit&FormRechercher_Txt_Recherche_name_attr=listeTitreSerie:%20%28Poultry%20science%29>
>>> *ISSN*  
>>> 0032-5791<http://www.refdoc.fr/?traduire=en&FormRechercher=submit&FormRechercher_Txt_Recherche_name_attr=identifiantsDoc:%20%280032-5791%29>
>>>  *CODEN* POSCAL
>>> Source / Source
>>> 1996, vol. 75, no4, pp. 447-458 [12 page(s) (article)]
>>>
>>> If you Google "group selection in chickens," you will find lots of other
>>> interesting stuff.
>>>
>>>
>>> Let me know if this helps and what you think.
>>>
>>> N
>>>
>>> Nicholas S. Thompson
>>>  Emeritus Professor of Psychology and Ethology,
>>> Clark University ([email protected])
>>> http://home.earthlink.net/~nickthompson/naturaldesigns/<http://home.earthlink.net/%7Enickthompson/naturaldesigns/>
>>> http://www.cusf.org [City University of Santa Fe]
>>>
>>>
>>>
>>>
>>>
>>> ----- Original Message -----
>>>  *From:* Ted Carmichael <[email protected]>
>>> *To: *The Friday Morning Applied Complexity Coffee Group<[email protected]>
>>> *Sent:* 7/9/2010 5:34:29 AM
>>> *Subject:* [FRIAM] Real-world genetic algorithm example... help!
>>>
>>> Dear all,
>>>
>>> I'm trying to find reference to a story I read some time ago (a few
>>> years, perhaps?), and I'm hoping that either: a) I heard it from someone on
>>> this list, or b) someone on this list heard it, too.
>>>
>>> Anyway, it was a really cool example of a real-world genetic algorithm,
>>> having to do with chickens.  Traditionally, the best egg-producing chickens
>>> were allowed to produce the offspring for future generations.  However,
>>> these new chickens rarely lived up to their potential.  It was thought that
>>> maybe there were unknown things going on in the *clusters *of chickens,
>>> which represent the actual environment that these chickens are kept in.  And
>>> that the high producers, when gathered together in these groups, somehow
>>> failed to produce as many eggs as expected.
>>>
>>> So researchers decided to apply the fitness function to *groups *of
>>> chickens, rather than individuals.  This would perhaps account for social
>>> traits that are generally unknown, but may affect how many eggs were laid.
>>>  In fact, the researchers didn't care what those traits are, only that -
>>> whatever they may be - they are preserved in future generations in a way
>>> that increased production.
>>>
>>> And the experiment worked.  Groups of chickens that produced the most
>>> eggs were preserved, and subsequent generations were much more productive
>>> than with the traditional methods.
>>>
>>> Anyway, that's the story.  If anyone can provide a link, I would be very
>>> grateful.  (As I recall, it wasn't a technical paper, but rather a story in
>>> a more accessible venue.  Perhaps the NY Times article, or something
>>> similar?)
>>>
>>> Thanks!
>>>
>>> -Ted
>>>
>>>
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>>
>>
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