On Tue, Mar 11, 2014 at 5:57 PM, Ravi Alla <ravi.a...@berkeley.edu> wrote:
> Hi All,
> I've been able to submit jobs to the cluster through galaxy, it works great.
> But when the job is in queue to run (it is gray in the galaxy history pane)
> and I cancel the job, it still remains in queue on the cluster. Why does
> this happen? How can I delete the jobs in queue as well? I tried qdel
> <job_id> as galaxy user but it says I am not authenticated to delete the job.
> Any help would be greatly appreciated.
> Thanks
> Ravi.

What kind of cluster is it? e.g. SGE?

Are you using task splitting (parallelization)?

Peter
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