On Wed, Dec 10, 2014 at 4:31 PM, Wang, Yu <yu.w...@lrz.de> wrote:
> Hi, I am testing Basic Protocol 1 on my local galaxy instance. But Join
> didn't work. What did I do wrong?
> I installed join from galaxy main tool shed, bx_python_0_7 was installed but
> with installation Status "missing tool dependencies".
> Traceback (most recent call last):
>  File
> "/home/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/devteam/join/de21bdbb8d28/join/gops_join.py",
> line 13, in <module>
>    from bx.intervals import *
> ImportError: No module named bx.intervals

It looks like the automated installation of bx python failed somehow.

Looking at the package, it will attempt to install NumPy 1.7.1

Galaxy dev team, why isn't this declaring a dependency on:

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