Hi, this is
/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python2_7/site.cfg: [blas] include_dirs = library_dirs = :/usr/lib64 blas_libs = [lapack] library_dirs = //opt/acml5.3.1/gfortran64/lib:/usr/lib64 lapack_libs = acml Buliding numpy is ago. This is any scipy update. Am 09.06.2014 13:51, schrieb François Bissey: > numpy not bumpy. Sorry for the noise. > > On 9/06/2014, at 23:42, François Bissey <[email protected]> wrote: > >> Hi, >> >> Could you post the file: >> /var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python2_7/site.cfg >> for our perusal? You obviously managed to merge bumpy which fundamentally >> should have the exact same problem. >> Was it just before scipy or a while ago? >> >> François >> >> On 9/06/2014, at 23:25, Bastian Löffler <[email protected]> wrote: >> >>> Hi all, >>> >>> I can not build scipy 0.14.0 agaonst the currenct aclm since it >>> complains a missing blas: >>> >>> numpy.distutils.system_info.BlasNotFoundError: >>> Blas ( >>> http://www.netlib.org/blas/ >>> ) libraries not found. >>> Directories to search for the libraries can be specified in the >>> numpy/distutils/site.cfg file (section [blas]) or by setting >>> the BLAS environment variable. >>> * ERROR: sci-libs/scipy-0.14.0::gentoo failed (compile phase): >>> * (no error message) >>> * >>> * Call stack: >>> * ebuild.sh, line 93: Called src_compile >>> * environment, line 4075: Called distutils-r1_src_compile >>> * environment, line 1421: Called _distutils-r1_run_foreach_impl >>> 'python_compile' >>> * environment, line 312: Called python_parallel_foreach_impl >>> 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 3808: Called multibuild_parallel_foreach_variant >>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 2855: Called multibuild_foreach_variant >>> '_multibuild_parallel' '_python_multibuild_wrapper' >>> 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 2798: Called _multibuild_run >>> '_multibuild_parallel' '_python_multibuild_wrapper' >>> 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 2796: Called _multibuild_parallel >>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 2846: Called _python_multibuild_wrapper >>> 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 914: Called distutils-r1_run_phase 'python_compile' >>> * environment, line 1412: Called python_compile >>> * environment, line 3315: Called distutils-r1_python_compile >>> 'config_fc' '--noopt' '--noarch' >>> * environment, line 1292: Called esetup.py 'build' 'config_fc' >>> '--noopt' '--noarch' >>> * environment, line 1862: Called die >>> * The specific snippet of code: >>> * "${@}" || die >>> * >>> * If you need support, post the output of `emerge --info >>> '=sci-libs/scipy-0.14.0::gentoo'`, >>> * the complete build log and the output of `emerge -pqv >>> '=sci-libs/scipy-0.14.0::gentoo'`. >>> * The complete build log is located at >>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/build.log'. >>> * The ebuild environment file is located at >>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/environment'. >>> * Working directory: >>> '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python2_7' >>> * S: '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0' >>> /usr/lib64/portage/bin/isolated-functions.sh: line 226: kill: (6675) - >>> No such process >>> blas_opt_info: >>> system_info: >>> NOT AVAILABLE >>> >>> blas_info: >>> libraries not found in ['/usr/lib64'] >>> NOT AVAILABLE >>> >>> blas_src_info: >>> NOT AVAILABLE >>> >>> /usr/lib64/python3.3/distutils/dist.py:258: UserWarning: Unknown >>> distribution option: 'test_suite' >>> warnings.warn(msg) >>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1511: >>> UserWarning: >>> Atlas ( >>> http://math-atlas.sourceforge.net/ >>> ) libraries not found. >>> Directories to search for the libraries can be specified in the >>> numpy/distutils/site.cfg file (section [atlas]) or by setting >>> the ATLAS environment variable. >>> warnings.warn(AtlasNotFoundError.__doc__) >>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:566: >>> UserWarning: Specified path is invalid. >>> warnings.warn('Specified path %s is invalid.' % d) >>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1520: >>> UserWarning: >>> Blas ( >>> http://www.netlib.org/blas/ >>> ) libraries not found. >>> Directories to search for the libraries can be specified in the >>> numpy/distutils/site.cfg file (section [blas]) or by setting >>> the BLAS environment variable. >>> warnings.warn(BlasNotFoundError.__doc__) >>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1523: >>> UserWarning: >>> Blas ( >>> http://www.netlib.org/blas/ >>> ) sources not found. >>> Directories to search for the sources can be specified in the >>> numpy/distutils/site.cfg file (section [blas_src]) or by setting >>> the BLAS_SRC environment variable. >>> warnings.warn(BlasSrcNotFoundError.__doc__) >>> Traceback (most recent call last): >>> File "setup.py", line 237, in <module> >>> setup_package() >>> File "setup.py", line 234, in setup_package >>> setup(**metadata) >>> File "/usr/lib64/python3.3/site-packages/numpy/distutils/core.py", >>> line 135, in setup >>> config = configuration() >>> File "setup.py", line 173, in configuration >>> config.add_subpackage('scipy') >>> File >>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>> 966, in add_subpackage >>> caller_level = 2) >>> File >>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>> 935, in get_subpackage >>> caller_level = caller_level + 1) >>> File >>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>> 872, in _get_configuration_from_setup_py >>> config = setup_module.configuration(*args) >>> File "scipy/setup.py", line 12, in configuration >>> config.add_subpackage('integrate') >>> File >>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>> 966, in add_subpackage >>> caller_level = 2) >>> File >>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>> 935, in get_subpackage >>> caller_level = caller_level + 1) >>> File >>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>> 872, in _get_configuration_from_setup_py >>> config = setup_module.configuration(*args) >>> File "scipy/integrate/setup.py", line 12, in configuration >>> blas_opt = get_info('blas_opt',notfound_action=2) >>> File >>> "/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py", >>> line 340, in get_info >>> return cl().get_info(notfound_action) >>> File >>> "/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py", >>> line 499, in get_info >>> raise self.notfounderror(self.notfounderror.__doc__) >>> numpy.distutils.system_info.BlasNotFoundError: >>> Blas ( >>> http://www.netlib.org/blas/ >>> ) libraries not found. >>> Directories to search for the libraries can be specified in the >>> numpy/distutils/site.cfg file (section [blas]) or by setting >>> the BLAS environment variable. >>> * ERROR: sci-libs/scipy-0.14.0::gentoo failed (compile phase): >>> * (no error message) >>> * >>> * Call stack: >>> * ebuild.sh, line 93: Called src_compile >>> * environment, line 4075: Called distutils-r1_src_compile >>> * environment, line 1421: Called _distutils-r1_run_foreach_impl >>> 'python_compile' >>> * environment, line 312: Called python_parallel_foreach_impl >>> 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 3808: Called multibuild_parallel_foreach_variant >>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 2855: Called multibuild_foreach_variant >>> '_multibuild_parallel' '_python_multibuild_wrapper' >>> 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 2798: Called _multibuild_run >>> '_multibuild_parallel' '_python_multibuild_wrapper' >>> 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 2796: Called _multibuild_parallel >>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 2846: Called _python_multibuild_wrapper >>> 'distutils-r1_run_phase' 'python_compile' >>> * environment, line 914: Called distutils-r1_run_phase 'python_compile' >>> * environment, line 1412: Called python_compile >>> * environment, line 3315: Called distutils-r1_python_compile >>> 'config_fc' '--noopt' '--noarch' >>> * environment, line 1292: Called esetup.py 'build' 'config_fc' >>> '--noopt' '--noarch' >>> * environment, line 1862: Called die >>> * The specific snippet of code: >>> * "${@}" || die >>> * >>> * If you need support, post the output of `emerge --info >>> '=sci-libs/scipy-0.14.0::gentoo'`, >>> * the complete build log and the output of `emerge -pqv >>> '=sci-libs/scipy-0.14.0::gentoo'`. >>> * The complete build log is located at >>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/build.log'. >>> * The ebuild environment file is located at >>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/environment'. >>> * Working directory: >>> '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python3_3' >>> * S: '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0' >>> /usr/lib64/portage/bin/isolated-functions.sh: line 226: kill: (6675) - >>> No such process >>> >>>>>> Failed to emerge sci-libs/scipy-0.14.0, Log file: >>> >>> >>> >>> >> > >
