You obviously didn't read my last two emails. Francois
On Sun, 15 Jun 2014 16:22:43 Bastian Löffler wrote: > I still have this problem when updating to scipy-0.14.0. Ideas? > > Am 09.06.2014 20:41, schrieb Bastian Löffler: > > Hi, > > > > this is > > > > /var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python2_7/site.cf > > g: > > > > [blas] > > include_dirs = > > library_dirs = :/usr/lib64 > > blas_libs = > > [lapack] > > library_dirs = //opt/acml5.3.1/gfortran64/lib:/usr/lib64 > > lapack_libs = acml > > > > Buliding numpy is ago. This is any scipy update. > > > > Am 09.06.2014 13:51, schrieb François Bissey: > >> numpy not bumpy. Sorry for the noise. > >> > >> On 9/06/2014, at 23:42, François Bissey <[email protected]> wrote: > >>> Hi, > >>> > >>> Could you post the file: > >>> /var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python2_7/site. > >>> cfg > >>> for our perusal? You obviously managed to merge bumpy which > >>> fundamentally > >>> should have the exact same problem. > >>> Was it just before scipy or a while ago? > >>> > >>> François > >>> > >>> On 9/06/2014, at 23:25, Bastian Löffler <[email protected]> wrote: > >>>> Hi all, > >>>> > >>>> I can not build scipy 0.14.0 agaonst the currenct aclm since it > >>>> complains a missing blas: > >>>> > >>>> numpy.distutils.system_info.BlasNotFoundError: > >>>> Blas ( > >>>> > >>>> http://www.netlib.org/blas/ > >>>> ) libraries not found. > >>>> > >>>> Directories to search for the libraries can be specified in the > >>>> numpy/distutils/site.cfg file (section [blas]) or by setting > >>>> the BLAS environment variable. > >>>> > >>>> * ERROR: sci-libs/scipy-0.14.0::gentoo failed (compile phase): > >>>> * (no error message) > >>>> * > >>>> * Call stack: > >>>> * ebuild.sh, line 93: Called src_compile > >>>> * environment, line 4075: Called distutils-r1_src_compile > >>>> * environment, line 1421: Called _distutils-r1_run_foreach_impl > >>>> 'python_compile' > >>>> * environment, line 312: Called python_parallel_foreach_impl > >>>> 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 3808: Called multibuild_parallel_foreach_variant > >>>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 2855: Called multibuild_foreach_variant > >>>> '_multibuild_parallel' '_python_multibuild_wrapper' > >>>> 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 2798: Called _multibuild_run > >>>> '_multibuild_parallel' '_python_multibuild_wrapper' > >>>> 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 2796: Called _multibuild_parallel > >>>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 2846: Called _python_multibuild_wrapper > >>>> 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 914: Called distutils-r1_run_phase > >>>> 'python_compile' > >>>> * environment, line 1412: Called python_compile > >>>> * environment, line 3315: Called distutils-r1_python_compile > >>>> 'config_fc' '--noopt' '--noarch' > >>>> * environment, line 1292: Called esetup.py 'build' 'config_fc' > >>>> '--noopt' '--noarch' > >>>> * environment, line 1862: Called die > >>>> * The specific snippet of code: > >>>> * "${@}" || die > >>>> * > >>>> * If you need support, post the output of `emerge --info > >>>> '=sci-libs/scipy-0.14.0::gentoo'`, > >>>> * the complete build log and the output of `emerge -pqv > >>>> '=sci-libs/scipy-0.14.0::gentoo'`. > >>>> * The complete build log is located at > >>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/build.log'. > >>>> * The ebuild environment file is located at > >>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/environment'. > >>>> * Working directory: > >>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python2_7' > >>>> * S: '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0' > >>>> /usr/lib64/portage/bin/isolated-functions.sh: line 226: kill: (6675) - > >>>> No such process > >>>> blas_opt_info: > >>>> > >>>> system_info: > >>>> NOT AVAILABLE > >>>> > >>>> blas_info: > >>>> libraries not found in ['/usr/lib64'] > >>>> NOT AVAILABLE > >>>> > >>>> blas_src_info: > >>>> NOT AVAILABLE > >>>> > >>>> /usr/lib64/python3.3/distutils/dist.py:258: UserWarning: Unknown > >>>> distribution option: 'test_suite' > >>>> > >>>> warnings.warn(msg) > >>>> > >>>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1511: > >>>> > >>>> UserWarning: > >>>> Atlas ( > >>>> > >>>> http://math-atlas.sourceforge.net/ > >>>> ) libraries not found. > >>>> > >>>> Directories to search for the libraries can be specified in the > >>>> numpy/distutils/site.cfg file (section [atlas]) or by setting > >>>> the ATLAS environment variable. > >>>> > >>>> warnings.warn(AtlasNotFoundError.__doc__) > >>>> > >>>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:566: > >>>> UserWarning: Specified path is invalid. > >>>> > >>>> warnings.warn('Specified path %s is invalid.' % d) > >>>> > >>>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1520: > >>>> > >>>> UserWarning: > >>>> Blas ( > >>>> > >>>> http://www.netlib.org/blas/ > >>>> ) libraries not found. > >>>> > >>>> Directories to search for the libraries can be specified in the > >>>> numpy/distutils/site.cfg file (section [blas]) or by setting > >>>> the BLAS environment variable. > >>>> > >>>> warnings.warn(BlasNotFoundError.__doc__) > >>>> > >>>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1523: > >>>> > >>>> UserWarning: > >>>> Blas ( > >>>> > >>>> http://www.netlib.org/blas/ > >>>> ) sources not found. > >>>> > >>>> Directories to search for the sources can be specified in the > >>>> numpy/distutils/site.cfg file (section [blas_src]) or by setting > >>>> the BLAS_SRC environment variable. > >>>> > >>>> warnings.warn(BlasSrcNotFoundError.__doc__) > >>>> > >>>> Traceback (most recent call last): > >>>> File "setup.py", line 237, in <module> > >>>> > >>>> setup_package() > >>>> > >>>> File "setup.py", line 234, in setup_package > >>>> > >>>> setup(**metadata) > >>>> > >>>> File "/usr/lib64/python3.3/site-packages/numpy/distutils/core.py", > >>>> > >>>> line 135, in setup > >>>> > >>>> config = configuration() > >>>> > >>>> File "setup.py", line 173, in configuration > >>>> > >>>> config.add_subpackage('scipy') > >>>> > >>>> File > >>>> > >>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line > >>>> 966, in add_subpackage > >>>> > >>>> caller_level = 2) > >>>> > >>>> File > >>>> > >>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line > >>>> 935, in get_subpackage > >>>> > >>>> caller_level = caller_level + 1) > >>>> > >>>> File > >>>> > >>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line > >>>> 872, in _get_configuration_from_setup_py > >>>> > >>>> config = setup_module.configuration(*args) > >>>> > >>>> File "scipy/setup.py", line 12, in configuration > >>>> > >>>> config.add_subpackage('integrate') > >>>> > >>>> File > >>>> > >>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line > >>>> 966, in add_subpackage > >>>> > >>>> caller_level = 2) > >>>> > >>>> File > >>>> > >>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line > >>>> 935, in get_subpackage > >>>> > >>>> caller_level = caller_level + 1) > >>>> > >>>> File > >>>> > >>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line > >>>> 872, in _get_configuration_from_setup_py > >>>> > >>>> config = setup_module.configuration(*args) > >>>> > >>>> File "scipy/integrate/setup.py", line 12, in configuration > >>>> > >>>> blas_opt = get_info('blas_opt',notfound_action=2) > >>>> > >>>> File > >>>> > >>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py", > >>>> line 340, in get_info > >>>> > >>>> return cl().get_info(notfound_action) > >>>> > >>>> File > >>>> > >>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py", > >>>> line 499, in get_info > >>>> > >>>> raise self.notfounderror(self.notfounderror.__doc__) > >>>> > >>>> numpy.distutils.system_info.BlasNotFoundError: > >>>> Blas ( > >>>> > >>>> http://www.netlib.org/blas/ > >>>> ) libraries not found. > >>>> > >>>> Directories to search for the libraries can be specified in the > >>>> numpy/distutils/site.cfg file (section [blas]) or by setting > >>>> the BLAS environment variable. > >>>> > >>>> * ERROR: sci-libs/scipy-0.14.0::gentoo failed (compile phase): > >>>> * (no error message) > >>>> * > >>>> * Call stack: > >>>> * ebuild.sh, line 93: Called src_compile > >>>> * environment, line 4075: Called distutils-r1_src_compile > >>>> * environment, line 1421: Called _distutils-r1_run_foreach_impl > >>>> 'python_compile' > >>>> * environment, line 312: Called python_parallel_foreach_impl > >>>> 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 3808: Called multibuild_parallel_foreach_variant > >>>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 2855: Called multibuild_foreach_variant > >>>> '_multibuild_parallel' '_python_multibuild_wrapper' > >>>> 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 2798: Called _multibuild_run > >>>> '_multibuild_parallel' '_python_multibuild_wrapper' > >>>> 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 2796: Called _multibuild_parallel > >>>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 2846: Called _python_multibuild_wrapper > >>>> 'distutils-r1_run_phase' 'python_compile' > >>>> * environment, line 914: Called distutils-r1_run_phase > >>>> 'python_compile' > >>>> * environment, line 1412: Called python_compile > >>>> * environment, line 3315: Called distutils-r1_python_compile > >>>> 'config_fc' '--noopt' '--noarch' > >>>> * environment, line 1292: Called esetup.py 'build' 'config_fc' > >>>> '--noopt' '--noarch' > >>>> * environment, line 1862: Called die > >>>> * The specific snippet of code: > >>>> * "${@}" || die > >>>> * > >>>> * If you need support, post the output of `emerge --info > >>>> '=sci-libs/scipy-0.14.0::gentoo'`, > >>>> * the complete build log and the output of `emerge -pqv > >>>> '=sci-libs/scipy-0.14.0::gentoo'`. > >>>> * The complete build log is located at > >>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/build.log'. > >>>> * The ebuild environment file is located at > >>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/environment'. > >>>> * Working directory: > >>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python3_3' > >>>> * S: '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0' > >>>> /usr/lib64/portage/bin/isolated-functions.sh: line 226: kill: (6675) - > >>>> No such process > >>>> > >>>>>>> Failed to emerge sci-libs/scipy-0.14.0, Log file:
