I did. I posted site.cfg an regarding numpy: Installing this was some time ago. Its an scipy update making trouble.
Regards Bastian Am 15.06.2014 23:13, schrieb François Bissey: > You obviously didn't read my last two emails. > > Francois > > On Sun, 15 Jun 2014 16:22:43 Bastian Löffler wrote: >> I still have this problem when updating to scipy-0.14.0. Ideas? >> >> Am 09.06.2014 20:41, schrieb Bastian Löffler: >>> Hi, >>> >>> this is >>> >>> /var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python2_7/site.cf >>> g: >>> >>> [blas] >>> include_dirs = >>> library_dirs = :/usr/lib64 >>> blas_libs = >>> [lapack] >>> library_dirs = //opt/acml5.3.1/gfortran64/lib:/usr/lib64 >>> lapack_libs = acml >>> >>> Buliding numpy is ago. This is any scipy update. >>> >>> Am 09.06.2014 13:51, schrieb François Bissey: >>>> numpy not bumpy. Sorry for the noise. >>>> >>>> On 9/06/2014, at 23:42, François Bissey <[email protected]> wrote: >>>>> Hi, >>>>> >>>>> Could you post the file: >>>>> /var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python2_7/site. >>>>> cfg >>>>> for our perusal? You obviously managed to merge bumpy which >>>>> fundamentally >>>>> should have the exact same problem. >>>>> Was it just before scipy or a while ago? >>>>> >>>>> François >>>>> >>>>> On 9/06/2014, at 23:25, Bastian Löffler <[email protected]> > wrote: >>>>>> Hi all, >>>>>> >>>>>> I can not build scipy 0.14.0 agaonst the currenct aclm since it >>>>>> complains a missing blas: >>>>>> >>>>>> numpy.distutils.system_info.BlasNotFoundError: >>>>>> Blas ( >>>>>> >>>>>> http://www.netlib.org/blas/ >>>>>> ) libraries not found. >>>>>> >>>>>> Directories to search for the libraries can be specified in the >>>>>> numpy/distutils/site.cfg file (section [blas]) or by setting >>>>>> the BLAS environment variable. >>>>>> >>>>>> * ERROR: sci-libs/scipy-0.14.0::gentoo failed (compile phase): >>>>>> * (no error message) >>>>>> * >>>>>> * Call stack: >>>>>> * ebuild.sh, line 93: Called src_compile >>>>>> * environment, line 4075: Called distutils-r1_src_compile >>>>>> * environment, line 1421: Called _distutils-r1_run_foreach_impl >>>>>> 'python_compile' >>>>>> * environment, line 312: Called python_parallel_foreach_impl >>>>>> 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 3808: Called multibuild_parallel_foreach_variant >>>>>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 2855: Called multibuild_foreach_variant >>>>>> '_multibuild_parallel' '_python_multibuild_wrapper' >>>>>> 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 2798: Called _multibuild_run >>>>>> '_multibuild_parallel' '_python_multibuild_wrapper' >>>>>> 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 2796: Called _multibuild_parallel >>>>>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 2846: Called _python_multibuild_wrapper >>>>>> 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 914: Called distutils-r1_run_phase >>>>>> 'python_compile' >>>>>> * environment, line 1412: Called python_compile >>>>>> * environment, line 3315: Called distutils-r1_python_compile >>>>>> 'config_fc' '--noopt' '--noarch' >>>>>> * environment, line 1292: Called esetup.py 'build' 'config_fc' >>>>>> '--noopt' '--noarch' >>>>>> * environment, line 1862: Called die >>>>>> * The specific snippet of code: >>>>>> * "${@}" || die >>>>>> * >>>>>> * If you need support, post the output of `emerge --info >>>>>> '=sci-libs/scipy-0.14.0::gentoo'`, >>>>>> * the complete build log and the output of `emerge -pqv >>>>>> '=sci-libs/scipy-0.14.0::gentoo'`. >>>>>> * The complete build log is located at >>>>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/build.log'. >>>>>> * The ebuild environment file is located at >>>>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/environment'. >>>>>> * Working directory: >>>>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python2_7' >>>>>> * S: '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0' >>>>>> /usr/lib64/portage/bin/isolated-functions.sh: line 226: kill: (6675) - >>>>>> No such process >>>>>> blas_opt_info: >>>>>> >>>>>> system_info: >>>>>> NOT AVAILABLE >>>>>> >>>>>> blas_info: >>>>>> libraries not found in ['/usr/lib64'] >>>>>> NOT AVAILABLE >>>>>> >>>>>> blas_src_info: >>>>>> NOT AVAILABLE >>>>>> >>>>>> /usr/lib64/python3.3/distutils/dist.py:258: UserWarning: Unknown >>>>>> distribution option: 'test_suite' >>>>>> >>>>>> warnings.warn(msg) >>>>>> >>>>>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1511: >>>>>> >>>>>> UserWarning: >>>>>> Atlas ( >>>>>> >>>>>> http://math-atlas.sourceforge.net/ >>>>>> ) libraries not found. >>>>>> >>>>>> Directories to search for the libraries can be specified in the >>>>>> numpy/distutils/site.cfg file (section [atlas]) or by setting >>>>>> the ATLAS environment variable. >>>>>> >>>>>> warnings.warn(AtlasNotFoundError.__doc__) >>>>>> >>>>>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:566: >>>>>> UserWarning: Specified path is invalid. >>>>>> >>>>>> warnings.warn('Specified path %s is invalid.' % d) >>>>>> >>>>>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1520: >>>>>> >>>>>> UserWarning: >>>>>> Blas ( >>>>>> >>>>>> http://www.netlib.org/blas/ >>>>>> ) libraries not found. >>>>>> >>>>>> Directories to search for the libraries can be specified in the >>>>>> numpy/distutils/site.cfg file (section [blas]) or by setting >>>>>> the BLAS environment variable. >>>>>> >>>>>> warnings.warn(BlasNotFoundError.__doc__) >>>>>> >>>>>> /usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py:1523: >>>>>> >>>>>> UserWarning: >>>>>> Blas ( >>>>>> >>>>>> http://www.netlib.org/blas/ >>>>>> ) sources not found. >>>>>> >>>>>> Directories to search for the sources can be specified in the >>>>>> numpy/distutils/site.cfg file (section [blas_src]) or by setting >>>>>> the BLAS_SRC environment variable. >>>>>> >>>>>> warnings.warn(BlasSrcNotFoundError.__doc__) >>>>>> >>>>>> Traceback (most recent call last): >>>>>> File "setup.py", line 237, in <module> >>>>>> >>>>>> setup_package() >>>>>> >>>>>> File "setup.py", line 234, in setup_package >>>>>> >>>>>> setup(**metadata) >>>>>> >>>>>> File "/usr/lib64/python3.3/site-packages/numpy/distutils/core.py", >>>>>> >>>>>> line 135, in setup >>>>>> >>>>>> config = configuration() >>>>>> >>>>>> File "setup.py", line 173, in configuration >>>>>> >>>>>> config.add_subpackage('scipy') >>>>>> >>>>>> File >>>>>> >>>>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>>>>> 966, in add_subpackage >>>>>> >>>>>> caller_level = 2) >>>>>> >>>>>> File >>>>>> >>>>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>>>>> 935, in get_subpackage >>>>>> >>>>>> caller_level = caller_level + 1) >>>>>> >>>>>> File >>>>>> >>>>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>>>>> 872, in _get_configuration_from_setup_py >>>>>> >>>>>> config = setup_module.configuration(*args) >>>>>> >>>>>> File "scipy/setup.py", line 12, in configuration >>>>>> >>>>>> config.add_subpackage('integrate') >>>>>> >>>>>> File >>>>>> >>>>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>>>>> 966, in add_subpackage >>>>>> >>>>>> caller_level = 2) >>>>>> >>>>>> File >>>>>> >>>>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>>>>> 935, in get_subpackage >>>>>> >>>>>> caller_level = caller_level + 1) >>>>>> >>>>>> File >>>>>> >>>>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/misc_util.py", line >>>>>> 872, in _get_configuration_from_setup_py >>>>>> >>>>>> config = setup_module.configuration(*args) >>>>>> >>>>>> File "scipy/integrate/setup.py", line 12, in configuration >>>>>> >>>>>> blas_opt = get_info('blas_opt',notfound_action=2) >>>>>> >>>>>> File >>>>>> >>>>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py", >>>>>> line 340, in get_info >>>>>> >>>>>> return cl().get_info(notfound_action) >>>>>> >>>>>> File >>>>>> >>>>>> "/usr/lib64/python3.3/site-packages/numpy/distutils/system_info.py", >>>>>> line 499, in get_info >>>>>> >>>>>> raise self.notfounderror(self.notfounderror.__doc__) >>>>>> >>>>>> numpy.distutils.system_info.BlasNotFoundError: >>>>>> Blas ( >>>>>> >>>>>> http://www.netlib.org/blas/ >>>>>> ) libraries not found. >>>>>> >>>>>> Directories to search for the libraries can be specified in the >>>>>> numpy/distutils/site.cfg file (section [blas]) or by setting >>>>>> the BLAS environment variable. >>>>>> >>>>>> * ERROR: sci-libs/scipy-0.14.0::gentoo failed (compile phase): >>>>>> * (no error message) >>>>>> * >>>>>> * Call stack: >>>>>> * ebuild.sh, line 93: Called src_compile >>>>>> * environment, line 4075: Called distutils-r1_src_compile >>>>>> * environment, line 1421: Called _distutils-r1_run_foreach_impl >>>>>> 'python_compile' >>>>>> * environment, line 312: Called python_parallel_foreach_impl >>>>>> 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 3808: Called multibuild_parallel_foreach_variant >>>>>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 2855: Called multibuild_foreach_variant >>>>>> '_multibuild_parallel' '_python_multibuild_wrapper' >>>>>> 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 2798: Called _multibuild_run >>>>>> '_multibuild_parallel' '_python_multibuild_wrapper' >>>>>> 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 2796: Called _multibuild_parallel >>>>>> '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 2846: Called _python_multibuild_wrapper >>>>>> 'distutils-r1_run_phase' 'python_compile' >>>>>> * environment, line 914: Called distutils-r1_run_phase >>>>>> 'python_compile' >>>>>> * environment, line 1412: Called python_compile >>>>>> * environment, line 3315: Called distutils-r1_python_compile >>>>>> 'config_fc' '--noopt' '--noarch' >>>>>> * environment, line 1292: Called esetup.py 'build' 'config_fc' >>>>>> '--noopt' '--noarch' >>>>>> * environment, line 1862: Called die >>>>>> * The specific snippet of code: >>>>>> * "${@}" || die >>>>>> * >>>>>> * If you need support, post the output of `emerge --info >>>>>> '=sci-libs/scipy-0.14.0::gentoo'`, >>>>>> * the complete build log and the output of `emerge -pqv >>>>>> '=sci-libs/scipy-0.14.0::gentoo'`. >>>>>> * The complete build log is located at >>>>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/build.log'. >>>>>> * The ebuild environment file is located at >>>>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/temp/environment'. >>>>>> * Working directory: >>>>>> '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0-python3_3' >>>>>> * S: '/var/tmp/portage/sci-libs/scipy-0.14.0/work/scipy-0.14.0' >>>>>> /usr/lib64/portage/bin/isolated-functions.sh: line 226: kill: (6675) - >>>>>> No such process >>>>>> >>>>>>>>> Failed to emerge sci-libs/scipy-0.14.0, Log file: > >
