Hi, I believe the unwarped eddy output will be under
Diffusion/eddy/eddy_unwarped_images.nii.gz https://github.com/Washington-University/Pipelines/blob/6e22e45a066df542660ad0cdb2e1cec6a373ecb4/DiffusionPreprocessing/scripts/run_eddy.sh#L523 > On Feb 2, 2017, at 10:08 AM, Szabolcs David <[email protected]> wrote: > > Hi All, > > I would like to look at the eddy corrected diffusion images+bvecs, but before > the realignment to the T1w. Is it possible somehow? > Or maybe just the trafo file of b0 to T1w registration available somewhere? > > Cheers, > Szabolcs > _______________________________________________ > HCP-Users mailing list > [email protected] > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
