We don’t distribute the diffusion space data. Peace,
Matt. From: <[email protected]<mailto:[email protected]>> on behalf of Szabolcs David <[email protected]<mailto:[email protected]>> Date: Wednesday, February 22, 2017 at 6:46 AM To: Philip A Cook <[email protected]<mailto:[email protected]>> Cc: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Subject: Re: [HCP-Users] dMRI after eddy but before acpc-T1W Hi Philip, Thank you for your email. Well I am in trouble, since in the Diffusion folder I can only see: bvals bvecs data.nii.gz grad_dev.nii.gz nodif_brain_mask.nii.gz I looked up the reference manuals (eg.: https://www.humanconnectome.org/documentation/data-release/Q1_Release_Appendix_III.pdf p.48) And it tells me the same. Am I missing something? Cheers, Szabolcs On Mon, Feb 20, 2017 at 8:31 PM, Philip A Cook <[email protected]<mailto:[email protected]>> wrote: Hi, I believe the unwarped eddy output will be under Diffusion/eddy/eddy_unwarped_images.nii.gz https://github.com/Washington-University/Pipelines/blob/6e22e45a066df542660ad0cdb2e1cec6a373ecb4/DiffusionPreprocessing/scripts/run_eddy.sh#L523 > On Feb 2, 2017, at 10:08 AM, Szabolcs David > <[email protected]<mailto:[email protected]>> wrote: > > Hi All, > > I would like to look at the eddy corrected diffusion images+bvecs, but before > the realignment to the T1w. Is it possible somehow? > Or maybe just the trafo file of b0 to T1w registration available somewhere? > > Cheers, > Szabolcs > _______________________________________________ > HCP-Users mailing list > [email protected]<mailto:[email protected]> > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > _______________________________________________ HCP-Users mailing list [email protected]<mailto:[email protected]> http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
