<snip>
   My next question is: Since I did get 835 PTFs on (all that didn't
involve NUCLEUS), can I go forward, or should I start over one more
time? Or restore from back up to the pre APPLY state and run again. Or
SMP/E restore?
</snip>

Just rerun the apply, fixing problems until a clean run is achieved. 
Each run will remember what the previous runs accomplished, and only
attempt to apply the stuff previously in error. 

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