Emily, what's your operating system and browser? Be sure to try a different combination if this continues to be a problem. It really sounds like something unique to your installation.
Emily Heureux wrote: >Hmmm. I click on Console and nothing happens. It is not showing an >'open/close' option, either, like I have seen before using 10.00. > >Maybe it is best for me to start with how I installed? I followed the >instructions on jmol.org. Since I am not using it as a stand-alone app on >my computer, but instead wanting to use it as part of a webpage, I went with >option 2, which says to only get the Jmol.js file, and all files that start >with JmolApplet0 and end in .jar. > >I just added ALL the files into my jmol 11.2.14 directory, and retested, but >it is still the same result. I will try redownloading and reinstalling now. >Let me know if you see something I've messed up here. Thanks, > >Emily > >-----Original Message----- >From: [EMAIL PROTECTED] >[mailto:[EMAIL PROTECTED] On Behalf Of Bob >Hanson >Sent: Friday, December 21, 2007 1:18 PM >To: [email protected] >Subject: Re: [Jmol-developers] Switching from 10.00 to 11.2.14 > >Emily, you need to find your Java console and tell us what it says >there. My guess is that the file was not found. Something is a little >different, and the file you think is there is not there. Then the server >sends a file-not-found page, and Jmol reports "no atoms loaded" because >it isn't a recognizable format. I really doubt it's a Jmol 10/Jmol 11 issue. > >You could just open a console from the Jmol popup menu and type > >load "xxxx" > >where xxxx is the file name you think is there. > >Bob > > >Emily Heureux wrote: > > > >>The jmol looks like it is starting. I see the purple "Jmol" at the top, >> >> >and > > >>at the bottom of the browser, it says, "Applet jmolApplet0 started". It >>stays that way, so there is an empty black box on the screen. If I >>right-click to use the jmol menu, at the top it says "No atoms loaded", >>which I believe is not correct. I think it is supposed to list the pdb >> >> >file > > >>then. So, maybe this is something you can't help me with, right? The >>mystery is, when using 10.00, it works fine, and right-clicking will show >>the pdbfile name instead of "No atoms loaded". >> >>I am using a web server (built into Catalyst). >> >>Question: If the jmolApplet line has a bad path, will it be reported, or >>will it just be black, with no model? >> >>-----Original Message----- >>From: [EMAIL PROTECTED] >>[mailto:[EMAIL PROTECTED] On Behalf Of Angel >>Herraez >>Sent: Friday, December 21, 2007 2:23 AM >>To: [email protected] >>Subject: Re: [Jmol-developers] Switching from 10.00 to 11.2.14 >> >>Hi Emily >> >>I do not envisage any effect of Jmol version. >>Can you say precisely what is not working? Do you see the applet? Any >>errors in the Java console or Javascript errors? >> >>Are you testing the page from hard disk or from web server? >> >> >>------------------------------------------------------------------------- >>This SF.net email is sponsored by: Microsoft >>Defy all challenges. Microsoft(R) Visual Studio 2005. >>http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ >>_______________________________________________ >>Jmol-developers mailing list >>[email protected] >>https://lists.sourceforge.net/lists/listinfo/jmol-developers >> >> >> >>------------------------------------------------------------------------- >>This SF.net email is sponsored by: Microsoft >>Defy all challenges. Microsoft(R) Visual Studio 2005. >>http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ >>_______________________________________________ >>Jmol-developers mailing list >>[email protected] >>https://lists.sourceforge.net/lists/listinfo/jmol-developers >> >> >> >> > > > > -- Robert M. Hanson Professor of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 ------------------------------------------------------------------------- This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ _______________________________________________ Jmol-developers mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-developers
