you need to report this to Bugzilla.
On Sat, Jul 24, 2010 at 7:09 AM, Philip Bays <[email protected]> wrote:
> I think I have just diagnosed the problem, but not the solution.
>
> I have opened the java preferences and completely cleared the cache. (I
> know Angel, you said that in the first place.) Indeed, firefox loads both
> structures as expected and three items now appear in the java cache -- the
> applet and each of the molecule files.
>
> If I now close firefox, reopen it, and access the page, the error occurs.
> If I remove the chlorophyll file from the java cache, then restart firefox,
> it works, again putting chlorophyl in the cache. Upon restarting firefox,
> the error again occurs.
>
> If I turn off java caching, there are no problems. For some reason,
> Firefox does not like chlorophyll in cache.
>
> Phil
>
>
> On Jul 24, 2010, at 7:29 AM, Otis Rothenberger wrote:
>
> Phil,
>
> I'm just curious about something: On a browser that throws the error
> loading chlorophyll, what happens if you execute the following JavaScript
> command from the location window (address field) while the first stucture is
> displayed in Jmol?
>
> javascript:jmolScript("load Structures/chlorophyll.pdb")
>
> I'm just bypassing the button above to see if the problem is via the button
> route???
>
> Otis
>
> Otis Rothenbergerchemagic.com
>
>
> On 7/24/2010 6:38 AM, Philip Bays wrote:
>
> Ok, I got the code right. But it does not work on all browsers. I see
> no difference with this code than what I was observing before. Namely, on
> the Mac, and the Mac only, and a freshly started mozilla browser (Firefox,
> Camino, SeaMonkey), the first structure loads fine, but the chlorophyll
> structure throws a java access error with the unsigned applet.
>
>
>
> On Jul 23, 2010, at 5:51 PM, Robert Hanson wrote:
>
> http://www.saintmarys.edu/~pbays/JStest/HTMLFiles/NT1.html<http://www.saintmarys.edu/%7Epbays/JStest/HTMLFiles/NT1.html>
> http://www.saintmarys.edu/~pbays/JStest/HTMLFiles/NT2.html<http://www.saintmarys.edu/%7Epbays/JStest/HTMLFiles/NT2.html>
>
> Ah, yes, these pages look much better. So what are the results?
>
> The page NT1 should load on all platforms with no issues at all. It is
> precisely the stated way of doing things.
>
> Same for NT2. And from this one I can save the state - see attached. (Just
> drag that PNG file into the app or applet.)
>
> Was that just the issue? That Phil was trying to load models before the
> applet was ready?
>
> One of the nice things about the signed applet on the web is that all the
> file references are http:// <http:/> references and you have the menu
> option to save the PNG image. This image actually contains the full Jmol
> state (as a trailing comment), so when you save the IMAGE to your hard
> drive, you can still load that image into Jmol and it will work. Really
> quite magical. I just did this with the chlorophyll example, and it still
> amazes me that it is possible.
>
> Bob
>
>
> On Fri, Jul 23, 2010 at 3:38 PM, Otis Rothenberger
> <[email protected]>wrote:
>
>> Phil and Bob,
>>
>> I'm confused about Bob's last note, but the following point may be
>> relevant:
>>
>> I get the same message as below, but it looks like Phil is on a Unix
>> system - case sensitive.
>>
>> http://www.saintmarys.edu/~pbays/JSTest/HTMLFiles/NT1.html<http://www.saintmarys.edu/%7Epbays/JSTest/HTMLFiles/NT1.html>does
>> not exist, buts
>> http://www.saintmarys.edu/~pbays/JStest/HTMLFiles/NT1.html<http://www.saintmarys.edu/%7Epbays/JStest/HTMLFiles/NT1.html>does
>> exist.
>>
>> Otis
>>
>> Otis Rothenbergerchemagic.com
>>
>>
>> On 7/23/2010 4:03 PM, Robert Hanson wrote:
>>
>> ------------------------------
>>
>> *We're sorry...*
>>
>> The page you are looking for:
>>
>> */~pbays/JSTest/HTMLFiles/NT1.html*
>>
>>
>>
>> On Fri, Jul 23, 2010 at 2:44 PM, Philip Bays <[email protected]>wrote:
>>
>>> OK Bob, et. al.:
>>>
>>> I have tried to mimic a piece of one of your pages, namely:
>>>
>>> http://chemapps.stolaf.edu/jmol/docs/examples-11/simple.htm
>>>
>>> I also tried to view this page in Firefox, but you are using the signed
>>> applet. Everything I have tried, even the stuff I should never, ever, ever
>>> do:-) works with the signed applet for me, and I may ultimately go that
>>> route.
>>>
>>> However, I have the same issues with Firefox on the Mac with the new
>>> script. I have loaded it at:
>>>
>>>
>>> www.saintmarys.edu/~pbays/JSTest/HTMLFiles/NT1.html<http://www.saintmarys.edu/%7Epbays/JSTest/HTMLFiles/NT1.html>
>>>
>>> The equivalent path to NT2.html is the signed applet.
>>>
>>>
>>>
>>> J. Philip Bays
>>> Professor of Chemistry
>>> Science Hall 172
>>> Saint Mary's College
>>> Notre Dame IN 46556
>>> (574) 284-4663
>>>
>>>
>>>
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>>>
>>
>>
>> --
>> Robert M. Hanson
>> Professor of Chemistry
>> St. Olaf College
>> 1520 St. Olaf Ave.
>> Northfield, MN 55057
>> http://www.stolaf.edu/people/hansonr
>> phone: 507-786-3107
>>
>>
>> If nature does not answer first what we want,
>> it is better to take what answer we get.
>>
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>
>>
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>>
>
>
> --
> Robert M. Hanson
> Professor of Chemistry
> St. Olaf College
> 1520 St. Olaf Ave.
> Northfield, MN 55057
> http://www.stolaf.edu/people/hansonr
> phone: 507-786-3107
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
> <chlorophyll.png>
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>
>
> J. Philip Bays
> Professor of Chemistry
> Department of Chemistry and Physics
> Saint Mary's College
> Notre Dame, IN 46556
> (574) 284-4663
> [email protected]
>
>
>
>
> ------------------------------------------------------------------------------
> This SF.net email is sponsored by Sprint
> What will you do first with EVO, the first 4G phone?
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>
>
> _______________________________________________
> Jmol-users mailing
> [email protected]https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>
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> This SF.net email is sponsored by Sprint
> What will you do first with EVO, the first 4G phone?
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>
>
> J. Philip Bays
> Professor of Chemistry
> Department of Chemistry and Physics
> Saint Mary's College
> Notre Dame, IN 46556
> (574) 284-4663
> [email protected]
>
>
>
>
>
> ------------------------------------------------------------------------------
> This SF.net email is sponsored by Sprint
> What will you do first with EVO, the first 4G phone?
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> _______________________________________________
> Jmol-users mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>
--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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