Ann Richmond wrote:
Hi, its Ann Richmond.
A few weeks ago we found some applications had been installed under tomcat on a few servers. The war file was there as well as the expanded apps.

I'll bet you've got pwned.

Perhaps someone else has answered this, but I would recommend googling some of the security websites and seeing if there is anything (default security settings, easy passwords, etc) that kiddie scripters are taking advantage of.

Also, have you checked out chkrootkit?

http://www.chkrootkit.org/

What user is Tomcat running under? Maybe someone got root access quite easily that way...

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