On Wed, Feb 13, 2019 at 05:21:09PM +0100, Tru Huynh wrote:
...
>
> Trying to install PyQt4_gpl_x11-4.12. on CentOS-7 is another issue :)
> ...
>
I went the easy route and pip3 install PyQt5-sip PyQt5,
and rebuild ...
the Python-3.5.2 version now works fine, but not the Python-3.6.6
which still fails!
[tru@sillage ~]$ module add pymol/release/2.3.0-Python-3.5.2
[tru@sillage ~]$ pymol
PyMOL(TM) Molecular Graphics System, Version 2.3.0.
Copyright (c) Schrodinger, LLC.
All Rights Reserved.
Created by Warren L. DeLano, Ph.D.
PyMOL is user-supported open-source software. Although some versions
are freely available, PyMOL is not in the public domain.
If PyMOL is helpful in your work or study, then please volunteer
support for our ongoing efforts to create open and affordable scientific
software by purchasing a PyMOL Maintenance and/or Support subscription.
More information can be found at "http://www.pymol.org";.
Enter "help" for a list of commands.
Enter "help <command-name>" for information on a specific command.
Hit ESC anytime to toggle between text and graphics.
Detected OpenGL version 4.6. Shaders available.
Detected GLSL version 4.60.
OpenGL graphics engine:
GL_VENDOR: NVIDIA Corporation
GL_RENDERER: GeForce GT 1030/PCIe/SSE2
GL_VERSION: 4.6.0 NVIDIA 410.93
Detected 6 CPU cores. Enabled multithreaded rendering.
[tru@sillage ~]$ module add pymol/release/2.3.0-Python-3.6.6
[tru@sillage ~]$ pymol
Traceback (most recent call last):
File
"/c7/shared/pymol/release/2.3.0-Python-3.6.6/lib/python3.6/site-packages/pymol/__init__.py",
line 64, in <module>
import pymol
File
"/c7/shared/pymol/release/2.3.0-Python-3.6.6/lib/python3.6/site-packages/pymol/__init__.py",
line 580, in <module>
import pymol._cmd
ImportError:
/c7/shared/pymol/release/2.3.0-Python-3.6.6/lib/python3.6/site-packages/pymol/_cmd.cpython-36m-x86_64-linux-gnu.so:
undefined symbol: glutSwapBuffers
Cheers
Tru
--
Dr Tru Huynh | mailto:t...@pasteur.fr | tel +33 1 45 68 87 37
https://research.pasteur.fr/en/team/structural-bioinformatics/
Institut Pasteur, 25-28 rue du Docteur Roux, 75724 Paris CEDEX 15 France
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