I am using the ancThresh model in the phytools package for 172 taxa. The model finished running: I have the liabilities, parameters, MCMC and alpha values output. The alpha value shows convergence of the model. However when I tried getting DIC values from the threshDIC function I got Infs for both the OU model and the Lambda model.The error output I have been receiving is posted below:
> BMThreshDIC <-threshDIC(scaled.tree, AT.data, ancestralBM, burnin=20000000) **** NOTE: no sequence provided, column order in x Error in start:nrow(mcmc$par) : argument of length 0 > BMThreshDIC <-threshDIC(scaled.tree, AT.data, ancestralBM, burnin=2000000) **** NOTE: no sequence provided, column order in x > OUThreshDIC Dbar Dhat pD DIC 2109.678 Inf -Inf -Inf Any help or guidance you could provide would be greatly appreciated. Thank you -- Aja Carter PhD Candidate Department of Earth and Environmental Sciences University of Pennsylvania [[alternative HTML version deleted]] _______________________________________________ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/