*SingleLinkageClustering

On 9 September 2013 17:41, Robert Layton <robertlay...@gmail.com> wrote:

> Thanks for the comments everyone, and the praise Jake.
>
> Based on this conversation, I think a good avenue would be:
>
> 1) Rename MSTCluster to SingleLinkageCluster
> 2) Merge (after checks, I still need to rebase again)
> 3) Gael's PR can either use this class, or replace it if he comes up with
> something better/faster/stronger. If the second case, remove this class
> then.
>
> Thoughts?
>
>
>
>
>
> On 9 September 2013 04:55, Andreas Mueller <amuel...@ais.uni-bonn.de>wrote:
>
>> On 09/08/2013 06:51 PM, Olivier Grisel wrote:
>> >
>> > I just had a look at the results section and it looks very
>> > interesting, in particular in its ability to bring noise robustness to
>> > single linkage. Have you tried to compare it with ward?
>> Yeah. I think the "experiments.py" had ward in it:
>>
>> https://github.com/amueller/information-theoretic-mst/blob/master/experiments.py
>> It faired quite nicely.
>> If the intrinsic dimensionality is far from n_features, it is better to
>> use an estimate of the intrinsic dimensionality.
>>
>> Hum it seems I forgot to check in a file from my work box. The current
>> master doesn't seem to run :(
>> I'll fix that tomorrow, then you can run it or I can post the results.
>> It was usually better than ward, sometimes a bit slower, though.
>>
>>
>>
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