Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required

2009-05-18 Thread Wayne Tyson
Luke and Ecolog:

Are there any ethical issues about the practice of jobbing-out journals to 
for-profit entities and taking a cut for the organization? Or do organizations 
get anything for their referral? Certainly, though, no officers of scholarly 
organizations would personally or professionally benefit from such 
cooperation would they? 

From Bergstrom and Bergstrom (Front Ecol Environ 2006; 4(9): 488-495) at the 
link ( 
http://octavia.zoology.washington.edu/publications/BergstromAndBergstrom06.pdf 
) available in their 2001 paper linked by Butler: 
. . . from the broader community perspective, the scientific community as a 
whole would benefit if overpriced journals were displaced by journals priced at 
or near average cost. The fraction of library budgets that is currently going 
to the shareholders of large commercial publishers could instead be used to 
provide services of genuine value to the academic community. Professional 
societies and university presses could help by expanding their existing 
journals or starting new ones. Individual scholars could advance this process 
in many ways: by contributing their time and efforts to the expansion of these 
non-profit journals, by refusing to do unpaid referee work for overpriced 
commercial publications, by self-archiving their papers in preprint archives or 
institutional repositories, and by favoring reasonably priced journals with 
their submissions. 

It appears to be simple and direct advice for a step in the right direction. 
Both of their papers (2001, 2006) contain interesting details that are shocking 
but not surprising. The citation data are particularly interesting. 

I seem to recall some relatively recent publicity regarding the quality of much 
of the research itself in some of the top (heavy?) journals that might place 
its/their credibility into question. Does this sound familiar; if so, can 
anyone provide citations/links?

Why didn't we hear about Bergstrom and Bergstrom's papers via the world media? 
Aren't reporters getting tipped off (phone calls, not just press-releases, 
please), or did the latest gossip on some teen-star's drug habit eclipse the 
item? 

WT

- Original Message - 
From: Luke K. Butler luke.but...@tufts.edu
To: ECOLOG-L@LISTSERV.UMD.EDU
Sent: Monday, May 11, 2009 6:58 PM
Subject: Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval 
required


 Carl Bergstrom and Theodore Bergstrom have produced an incredible  
 website about the economics of journal publishing, including  
 speculation about the future of open access journals.
 
 http://octavia.zoology.washington.edu/publishing/publishing.html
 
 
 
 Luke K. Butler
 Post-Doctoral Associate
 Department of Biology
 Tufts University
 165 Packard Ave
 Medford, MA 02155
 ph: 617.627.4036
 fax: 617.627.3805
 
 
 
 On May 11, 2009, at 2:26 PM, Jane Shevtsov wrote:
 
 Strictly speaking, you're correct. However, the purpose of copyright
 law is to reward people who do creative work. That would be us. The
 journal's contribution is coordinating peer review, formatting the
 paper and, most importantly, disseminating the paper. For this, they
 get paid by subscribers and sometimes page charges. That seems more
 than fair -- really, the for-profit journals should be paying us, the
 way magazines pay writers. Allowing them to dictate what we can do
 with our work after publication seems rather excessive! As a practical
 matter, are there any cases of scientists being sued or prosecuted for
 posting their publications on their websites?

 Anyone interested in these issues should read Lawrence Lessig and John
 Perry Barlow, particularly the latter's essay The Economy of Ideas:
 Selling Wine Without Bottles on the Global Net.

 Jane Shevtsov


 On Mon, May 11, 2009 at 1:24 PM, Gavin Simpson  
 gavin.simp...@ucl.ac.uk wrote:
 On Sun, 2009-05-10 at 11:14 -0400, Alexey Voinov wrote:
 Instead of or in addition to boycotting and protesting, I think  
 there is a much
 simpler and effective solution. Ask your kids. If they can share  
 their music,
 why can't we share our papers? It's called peer-to-peer  
 technology and requires
 just a little bit of good will from ourselves. All we need is to  
 assemble our
 collections of pdf articles that I bet each and everyone of us  
 has on our hard
 disks, and make them available for sharing.

 Students are already doing this. See this article:
 http://eaves.ca/2009/04/28/education-where-copyrighters-and- 
 publishers-are-the-pirates/

 Unfortunately these efforts seem to be sharing the fate of  
 Napster, attacked by
 lawsuits. However this can and will still develop without any  
 centralized
 services on a peer-to-peer basis as supported by bit-torrent and  
 other software.

 So it's really up to us to make it happen.

 Only if you condone copyright theft.

 Invariably, journals do not grant you a non-exclusive right to do
 anything with your own

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required

2009-05-13 Thread Gavin Simpson
, not just the
impact factor of the journal or the h-index of the scientist very little
will change. The UK government is planning on scrapping its peer-review
assessment of UK universities, replacing it in large part with a
reliance on metrics, because it is too costly to run the peer review. We
all know (except the managers/politicians that we all report to) that
these metrics are next to useless or are flawed to some degree, but that
doesn't matter one jot if the people we leave to manage science keep
relying upon them to direct career prospects, funding etc.

 
 In any case, I do not think that the way that many of us distribute PDFs of 
 our own work constitutes rampant disregard for copyright law. 

I never said it was. I was responding directly to the suggestion that we
act together as a community to conduct massive copyright theft by making
our pdf collections (whether our own work or otherwise) available over
p2p networks. Encouraging people to commit a crime on a list server like
this is just plain irresponsible - and in some jurisdictions might be
illegal in and of itself.

If individuals choose to register a vote for retaining a bit of freedom
to do with their work as they see fit by distributing their own work as
PDF's then good on them. They could go further than this and try to
educate the publishers a bit (probably won't work, but you'd be
surprised), and I pointed to the creative commons initiative that allows
scientists to try to retain some rights to distribute their work by
adding an addendum to the copyright transfer form sent to you by a
publisher. If they say no, you can still choose to ignore them and pop
your pdf on your website or hand it out to anyone who asks. But if a
journal did that to me, I'd think very long and hard about whether I
wanted to publish in such a journal in future...

All the best,

G

 But as soon 
 as one of my papers provides the lyrics for the theme song of a Hollywood 
 movie about the fuzzy evaluation of environmental impacts I promise to 
 reconsider.
 
 Bill Silvert
 
 - Original Message - 
 From: Gavin Simpson gavin.simp...@ucl.ac.uk
 To: ECOLOG-L@LISTSERV.UMD.EDU
 Sent: Monday, May 11, 2009 6:24 PM
 Subject: Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval 
 required
 
  On Sun, 2009-05-10 at 11:14 -0400, Alexey Voinov wrote:
  Instead of or in addition to boycotting and protesting, I think there is 
  a much
  simpler and effective solution. Ask your kids. If they can share their 
  music,
  why can't we share our papers? It's called peer-to-peer technology and 
  requires
  just a little bit of good will from ourselves. All we need is to assemble 
  our
  collections of pdf articles that I bet each and everyone of us has on our 
  hard
  disks, and make them available for sharing.
 
  Students are already doing this. See this article:
  http://eaves.ca/2009/04/28/education-where-copyrighters-and-publishers-are-the-pirates/
 
  Unfortunately these efforts seem to be sharing the fate of Napster, 
  attacked by
  lawsuits. However this can and will still develop without any centralized
  services on a peer-to-peer basis as supported by bit-torrent and other 
  software.
 
  So it's really up to us to make it happen.
 
  Only if you condone copyright theft.
 
  Invariably, journals do not grant you a non-exclusive right to do
  anything with your own publications that you might have in PDF format.
  Sometimes they allow you to post to a website your final version before
  journal formatting. Sometimes a journal may allow you to do this only
  after a certain period of time, or they may allow you to post their
  version of the manuscript on your (or your institutes's) website after a
  period of time (6-12months say). It all depends upon what rights you
  signed away when you completed your copyright transfer form.
 
  Reproducing or distributing any publications that are not your own, that
  are not covered by a licence that allows you to do this, provided to you
  by the publisher of said content, would also constitute copyright theft.
 
  Circumventing these restrictions, could, in some countries, be
  considered violation of copyright laws.  Doing this with software in the
  US for example cold make you fall foul of the DMCA:
  http://en.wikipedia.org/wiki/DMCA
 
  Whilst I'm no fan of the current predominant publication model, nor many
  of the associated citation indices, rampant disregard for copyright law
  is *not* the way to solve these problems.
 
  You should exercise your right to do with your work (i.e. your final
  draft, not a journal compilation/formatting of your work) as you see
  fit, and publish it in journals that have more open policies regarding
  works published by them. Or try to retain some of the rights you wish
  for, for example by attaching a Creative Commons Scholars Copyright
  Addendum to the publisher's copyright transfer forms, in an attempt to
  negotiate retaining some rights:
 
  http

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required

2009-05-12 Thread Wayne Tyson

Luke and Ecolog:

Thanks for the link!

Are there any ethical issues about the practice of jobbing-out journals to 
for-profit entities and taking a cut for the organization? Or do 
organizations get anything besides a few copies of the publication for their 
contracts? Certainly, though, no officers of scholarly organizations would 
personally or professionally benefit from such cooperation would they? I 
simply do not know, and would like to be reassured that there are no issues 
there.


From Bergstrom and Bergstrom (Front Ecol Environ 2006; 4(9): 488-495) at the 
link ( 
http://octavia.zoology.washington.edu/publications/BergstromAndBergstrom06.pdf ) 
available in their 2001 paper linked by Butler:
. . . from the broader community perspective, the scientific community as a 
whole would benefit if overpriced journals were displaced by journals priced 
at or near average cost. The fraction of library budgets that is currently 
going to the shareholders of large commercial publishers could instead be 
used to provide services of genuine value to the academic community. 
Professional societies and university presses could help by expanding their 
existing journals or starting new ones. Individual scholars could advance 
this process in many ways: by contributing their time and efforts to the 
expansion of these non-profit journals, by refusing to do unpaid referee 
work for overpriced commercial publications, by self-archiving their papers 
in preprint archives or institutional repositories, and by favoring 
reasonably priced journals with their submissions.


It appears to be simple and direct advice for a step in the right direction. 
Both of their papers (2001, 2006) contain interesting details that are 
shocking but not surprising. The citation data are particularly interesting. 
But this and a central micropayment system or institutional generosity still 
won't get Dr. Voltolini and unconnected researchers and the curious public 
the kind of access they once had through libraries in the paper-journal 
days. It took time, but it was a more level playing field. People felt good 
when they generously mailed off a copy (even Thermofax [R]) of a paper now 
and then. And before that, it was the journals or nothing. Apparently, 
progress is trying to take that full circle. What would some obscure clerk 
in some patent office do now, take out his quill pen and scratch a note to 
Steinmetz?


I seem to recall some relatively recent publicity regarding the quality of 
much of the research itself in some of the top (heavy?) journals that 
might place its/their credibility into question. Does this sound familiar; 
if so, can anyone provide citations/links?


Why didn't we hear about Bergstrom and Bergstrom's papers via the world 
media? Aren't reporters getting tipped off (phone calls, not just 
press-releases, please), or did the latest gossip on some teen-star's drug 
habit eclipse the item? Were it not for Butler and Ecolog, I wouldn't have 
known about their studies.


It appears that publish or perish is alive and well, hustling. No wonder, 
given the pressure on tenure-seekers. What a tangled web!


WT

Today the libraries, tomorrow the readers?

Hard-headed business analysis:

Do the for-profit publishers use pricing theory in setting their charges? 
Were the publications not profitable enough before pdf files, or were the 
latter seen as a golden goose landing in their laps? With all their 
resources, couldn't they read the pixels on the screen and find a way to 
maybe even greater profitability through increased actual quality and wider 
consumption of their product? Certainly they have the distinct advantage of 
momentum/reputation, which it would be a shame to squander, no? Even if 
there was a time-limited system for scanning before purchase at a reasonable 
rate (mimicking what one used to do in a library), the unit sales might be 
high enough to eventually increase profits, especially if the publishers 
took it upon themselves to generate a broader readership. A phenomenon to 
which the publishers have not yet awakened is that of a wage-earner pursuing 
an extra-institutional road to greater knowledge. Universities like MIT, for 
example, recognize that it takes little or nothing to make educational 
materials available to anyone with an Internet connection, which, by 
lifting all boats, ensures longevity and respect in spades. Why not take 
the high road instead of putting obstacles in the path of learning? At long 
last, can the world society afford to do otherwise? The top journals would 
then gain well-deserved respect--and profits too. Better than a mass Exodus.




- Original Message - 
From: Luke K. Butler luke.but...@tufts.edu

To: ECOLOG-L@LISTSERV.UMD.EDU
Sent: Monday, May 11, 2009 6:58 PM
Subject: Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval 
required




Carl Bergstrom and Theodore Bergstrom have produced an incredible
website about the economics of journal

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required

2009-05-11 Thread Scott Chamberlain
Is there money for graduate students to publish in open access journals? I 
agree with Jane Shevtsov's comment about the cost of open access journals. 
That is, publishing in open access journal seems superior to the old model 
so that everyone can access articles, but how can poor scientists (i.e., 
grad students like myself) afford to publish in open access journals?

Thanks! 
Scott Chamberlain
EEB, Rice University


Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required

2009-05-11 Thread Gavin Simpson
On Sun, 2009-05-10 at 11:14 -0400, Alexey Voinov wrote:
 Instead of or in addition to boycotting and protesting, I think there is a 
 much 
 simpler and effective solution. Ask your kids. If they can share their music, 
 why can't we share our papers? It's called peer-to-peer technology and 
 requires 
 just a little bit of good will from ourselves. All we need is to assemble our 
 collections of pdf articles that I bet each and everyone of us has on our 
 hard 
 disks, and make them available for sharing.
 
 Students are already doing this. See this article:
 http://eaves.ca/2009/04/28/education-where-copyrighters-and-publishers-are-the-pirates/
 
 Unfortunately these efforts seem to be sharing the fate of Napster, attacked 
 by 
 lawsuits. However this can and will still develop without any centralized 
 services on a peer-to-peer basis as supported by bit-torrent and other 
 software.
 
 So it's really up to us to make it happen.

Only if you condone copyright theft.

Invariably, journals do not grant you a non-exclusive right to do
anything with your own publications that you might have in PDF format.
Sometimes they allow you to post to a website your final version before
journal formatting. Sometimes a journal may allow you to do this only
after a certain period of time, or they may allow you to post their
version of the manuscript on your (or your institutes's) website after a
period of time (6-12months say). It all depends upon what rights you
signed away when you completed your copyright transfer form.

Reproducing or distributing any publications that are not your own, that
are not covered by a licence that allows you to do this, provided to you
by the publisher of said content, would also constitute copyright theft.

Circumventing these restrictions, could, in some countries, be
considered violation of copyright laws.  Doing this with software in the
US for example cold make you fall foul of the DMCA:
http://en.wikipedia.org/wiki/DMCA

Whilst I'm no fan of the current predominant publication model, nor many
of the associated citation indices, rampant disregard for copyright law
is *not* the way to solve these problems.

You should exercise your right to do with your work (i.e. your final
draft, not a journal compilation/formatting of your work) as you see
fit, and publish it in journals that have more open policies regarding
works published by them. Or try to retain some of the rights you wish
for, for example by attaching a Creative Commons Scholars Copyright
Addendum to the publisher's copyright transfer forms, in an attempt to
negotiate retaining some rights:

http://sciencecommons.org/projects/publishing/


 So it's really up to us to make it happen.

So, I agree with the sentiment, but not with the means by which you
suggest we go about it.

G

 
 
 -- 
 Alexey Voinov
 _
 !!!   please note new e-mail address: aavoi...@gmail.com  !!!
 _
 Chesapeake  Research  Consortium  Community  Modeling  Program 
 Johns Hopkins University Dept. of Geography and Environm. Engineering
 645 Contees Wharf Road, P.O. Box 28, Edgewater, MD 21037
 TEL: 410 798-1283;  703 880-1178WWW: http://www.likbez.com/AV
 
 Fellow, Gund Institute for Ecological Economics,University of Vermont
 President,Int.Envir.Modeling. and Software Soc.,http://www.iemss.org/
 New book: Systems Science and Modeling for Ecological Economics
 http://books.elsevier.com/companions/9780123725837
 
 
 
 
 
  --
  
  Date:Sat, 9 May 2009 16:56:12 -0700
  From:Wayne Tyson landr...@cox.net
  Subject: Re: Open Access and Intellectual Imperialism  Approval required  
  Re: [ECOLOG-L] Teaching Biostatistics !!!
  
  (Suggested replacement post)
  
Ecolog:
  
In my university I do not have access to literature sources like =
  Biological Abstracts for example to reach the authors and articles . . =
  .
  
This is an excellent example, unfortunately, of how pricing =
  intellectual resources out of range for outsiders is a moral =
  indictment of much of academia. This man--or any man or woman or child =
  (especially) should never have to hit a university firewall, be required =
  to pay tens of dollars ($30, $40, and more) to download a pdf file, ad =
  nauseam. Think of the burdensome expense and effort required on the part =
  of so many even to gain the privilege of Internet access in the first =
  place!=20
  
Those truly concerned about the future of the earth and its life, even =
  civilization, should realize that the history of intellectual =
  development is one of free exchange of ideas and information, not its =
  conversion into profit centers. It is not the struggling who should pay =
  the comfortable, it is the comfortable who benefit from free =
  intellectual synergy that compounds like a breeder-reactor, who

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required

2009-05-11 Thread Jane Shevtsov
Strictly speaking, you're correct. However, the purpose of copyright
law is to reward people who do creative work. That would be us. The
journal's contribution is coordinating peer review, formatting the
paper and, most importantly, disseminating the paper. For this, they
get paid by subscribers and sometimes page charges. That seems more
than fair -- really, the for-profit journals should be paying us, the
way magazines pay writers. Allowing them to dictate what we can do
with our work after publication seems rather excessive! As a practical
matter, are there any cases of scientists being sued or prosecuted for
posting their publications on their websites?

Anyone interested in these issues should read Lawrence Lessig and John
Perry Barlow, particularly the latter's essay The Economy of Ideas:
Selling Wine Without Bottles on the Global Net.

Jane Shevtsov


On Mon, May 11, 2009 at 1:24 PM, Gavin Simpson gavin.simp...@ucl.ac.uk wrote:
 On Sun, 2009-05-10 at 11:14 -0400, Alexey Voinov wrote:
 Instead of or in addition to boycotting and protesting, I think there is a 
 much
 simpler and effective solution. Ask your kids. If they can share their music,
 why can't we share our papers? It's called peer-to-peer technology and 
 requires
 just a little bit of good will from ourselves. All we need is to assemble our
 collections of pdf articles that I bet each and everyone of us has on our 
 hard
 disks, and make them available for sharing.

 Students are already doing this. See this article:
 http://eaves.ca/2009/04/28/education-where-copyrighters-and-publishers-are-the-pirates/

 Unfortunately these efforts seem to be sharing the fate of Napster, attacked 
 by
 lawsuits. However this can and will still develop without any centralized
 services on a peer-to-peer basis as supported by bit-torrent and other 
 software.

 So it's really up to us to make it happen.

 Only if you condone copyright theft.

 Invariably, journals do not grant you a non-exclusive right to do
 anything with your own publications that you might have in PDF format.
 Sometimes they allow you to post to a website your final version before
 journal formatting. Sometimes a journal may allow you to do this only
 after a certain period of time, or they may allow you to post their
 version of the manuscript on your (or your institutes's) website after a
 period of time (6-12months say). It all depends upon what rights you
 signed away when you completed your copyright transfer form.

 Reproducing or distributing any publications that are not your own, that
 are not covered by a licence that allows you to do this, provided to you
 by the publisher of said content, would also constitute copyright theft.

 Circumventing these restrictions, could, in some countries, be
 considered violation of copyright laws.  Doing this with software in the
 US for example cold make you fall foul of the DMCA:
 http://en.wikipedia.org/wiki/DMCA

 Whilst I'm no fan of the current predominant publication model, nor many
 of the associated citation indices, rampant disregard for copyright law
 is *not* the way to solve these problems.

 You should exercise your right to do with your work (i.e. your final
 draft, not a journal compilation/formatting of your work) as you see
 fit, and publish it in journals that have more open policies regarding
 works published by them. Or try to retain some of the rights you wish
 for, for example by attaching a Creative Commons Scholars Copyright
 Addendum to the publisher's copyright transfer forms, in an attempt to
 negotiate retaining some rights:

 http://sciencecommons.org/projects/publishing/


 So it's really up to us to make it happen.

 So, I agree with the sentiment, but not with the means by which you
 suggest we go about it.

 G



 --
 Alexey Voinov
 _
 !!!   please note new e-mail address: aavoi...@gmail.com  !!!
 _
 Chesapeake  Research  Consortium  Community  Modeling  Program     
 Johns Hopkins University Dept. of Geography and Environm. Engineering
 645 Contees Wharf Road, P.O. Box 28, Edgewater, MD 21037
 TEL: 410 798-1283;  703 880-1178        WWW: http://www.likbez.com/AV

 Fellow, Gund Institute for Ecological Economics,University of Vermont
 President,Int.Envir.Modeling. and Software Soc.,http://www.iemss.org/
     New book: Systems Science and Modeling for Ecological Economics
             http://books.elsevier.com/companions/9780123725837





  --
 
  Date:    Sat, 9 May 2009 16:56:12 -0700
  From:    Wayne Tyson landr...@cox.net
  Subject: Re: Open Access and Intellectual Imperialism  Approval required  
  Re: [ECOLOG-L] Teaching Biostatistics !!!
 
  (Suggested replacement post)
 
    Ecolog:
 
    In my university I do not have access to literature sources like =
  Biological Abstracts for example to reach the authors and articles

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required

2009-05-11 Thread William Silvert
I thank Gavin for his advice. I think Sarah Frias-Torres dealt with this, 
but I gather that if anyone downloads one of my copyrighted PDFs to use as 
the screenplay for a movie or the lyrics of a pop song, that would be a 
violation. But only a PDFile would do that.


As a former civil rights worker I confess to many acts of civil disobedience 
and violation of unjust laws. We are facing a stiuation where science and 
scientists are really suffering - at a time when we are trying to encourage 
the spread of intellectual activity in the developing world, the 
increasingly difficult access to journals restricts good research in many 
fields only to those in wealthy institutions. Attempt[ing] to negotiate 
from a postion of weakness is not going to lead to prompt reform.


The arrogance of the journals can be hard to believe. I once wrote a paper 
which I circulated as a preprint, which one of my friends showed to a 
leading figure in the field who edited a prestigious journal - he called me 
up and asked if I would let him publish it in his journal. I was of course 
delighted! But now that my reprints are exhausted and I want to send out 
PDFs, they won't even give me one for my own use - they want to charge me 30 
euros! And this for a paper published over 30 years ago.


Unfortunately we cannot count on all of our scientific colleagues for 
support in fighting this. I remember once a talk by a distinguished Spanish 
scientist, one of Ramon Margalef's most famous students, who had to admit 
that due to a limited equipment budget the data were not quite as complete 
as could be wished. Another scientist from a wealthier institution (in the 
UK Gavin, in the UK) sniffed that scientists from the poorer countries 
shouldn't be working on problems that the wealthy labs could handle better. 
I am sure that he would share Gavin's concerns about making science more 
widely available through piracy.


In any case, I do not think that the way that many of us distribute PDFs of 
our own work constitutes rampant disregard for copyright law. But as soon 
as one of my papers provides the lyrics for the theme song of a Hollywood 
movie about the fuzzy evaluation of environmental impacts I promise to 
reconsider.


Bill Silvert

- Original Message - 
From: Gavin Simpson gavin.simp...@ucl.ac.uk

To: ECOLOG-L@LISTSERV.UMD.EDU
Sent: Monday, May 11, 2009 6:24 PM
Subject: Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval 
required



On Sun, 2009-05-10 at 11:14 -0400, Alexey Voinov wrote:
Instead of or in addition to boycotting and protesting, I think there is 
a much
simpler and effective solution. Ask your kids. If they can share their 
music,
why can't we share our papers? It's called peer-to-peer technology and 
requires
just a little bit of good will from ourselves. All we need is to assemble 
our
collections of pdf articles that I bet each and everyone of us has on our 
hard

disks, and make them available for sharing.

Students are already doing this. See this article:
http://eaves.ca/2009/04/28/education-where-copyrighters-and-publishers-are-the-pirates/

Unfortunately these efforts seem to be sharing the fate of Napster, 
attacked by

lawsuits. However this can and will still develop without any centralized
services on a peer-to-peer basis as supported by bit-torrent and other 
software.


So it's really up to us to make it happen.


Only if you condone copyright theft.

Invariably, journals do not grant you a non-exclusive right to do
anything with your own publications that you might have in PDF format.
Sometimes they allow you to post to a website your final version before
journal formatting. Sometimes a journal may allow you to do this only
after a certain period of time, or they may allow you to post their
version of the manuscript on your (or your institutes's) website after a
period of time (6-12months say). It all depends upon what rights you
signed away when you completed your copyright transfer form.

Reproducing or distributing any publications that are not your own, that
are not covered by a licence that allows you to do this, provided to you
by the publisher of said content, would also constitute copyright theft.

Circumventing these restrictions, could, in some countries, be
considered violation of copyright laws.  Doing this with software in the
US for example cold make you fall foul of the DMCA:
http://en.wikipedia.org/wiki/DMCA

Whilst I'm no fan of the current predominant publication model, nor many
of the associated citation indices, rampant disregard for copyright law
is *not* the way to solve these problems.

You should exercise your right to do with your work (i.e. your final
draft, not a journal compilation/formatting of your work) as you see
fit, and publish it in journals that have more open policies regarding
works published by them. Or try to retain some of the rights you wish
for, for example by attaching a Creative Commons Scholars Copyright
Addendum

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-11 Thread Hamazaki, Hamachan (DFG)
Wow

Open Access journals, open Access softwares, and plenty of undergraduates and 
graduate students who are interested in field and lab works.  Now, I can do all 
of my projects almost at no cost, without hiring anyone with costly salary, 
benefits, and insurance.  No wonder, John, the frustrated Post Doc, can't get a 
long-term stable career. 
 

Toshihide Hamachan Hamazaki, PhD : 濱崎俊秀:浜ちゃん
Alaska Department of Fish  Game
Division of Commercial Fisheries
333 Raspberry Rd. Anchorage, Alaska 99518
Ph: 907-267-2158
Fax: 907-267-2442
Cell: 907-440-9934
E-mail: toshihide.hamaz...@alaska.gov

-Original Message-
From: Ecological Society of America: grants, jobs, news 
[mailto:ecolo...@listserv.umd.edu] On Behalf Of malcolm McCallum
Sent: Sunday, May 10, 2009 8:00 AM
To: ECOLOG-L@LISTSERV.UMD.EDU
Subject: Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval 
required Re: [ECOLOG-L] Teaching Biostatistics !!!

1) I am a founding editor of Herpetological Conservation and Biology (
http://www.herpconbio.org).It charges nothing for anything.  Our turn-around
tends to be competitive with any other journal and
if you look at the journal you will see that it is done pretty
professionally and has a very good advisory board
and editorial staff.  This is done entirely by herpetologists without any
cash outlay except for reserving the web address (~$25)
and server costs (~$100).  The layouts, editing, copy-editing, cover art,
etc are all contributed.  We are covered by all the major
indexes, and ISI inclusion is hopefully forthcoming soon, and permanent
copies are deposited in a series of major libraries.
I am clearly convinced that for-pay online journals cover almost all of
their overhead
very early in the year.  In fact, we have been approached by commercial
companies who want to pick us up, and we have refused
because it would escalate, not reduce costs.

2) If a discipline is not happy with the current journals, start a new one
and do the buttload of work required to
provide it a competitive showing.  It really isn't that hard, you can even
purchase, although we did not, pre-formatted websites on the web for
a reasonable cost.  It only takes a few folks who are dedicated, a lot of
folks make it a breeze.

3)  If you are a society that owns a journal consider moving your journal to
your own server and abandoning the regular publishers.  You can put every
old paper
on a website without any major problem.  This can be done one of two way:
 (1) as an image files and then an abstract placed on the website so Google
Scholar picks them up.  Then go to the GS website and ask them to monitor
your website.  Its simple.

4)  If you do not have the web programming background, get an undergraduate
who is interested in the topic and make them the web manager.  Today, many
HighSchool students know web services and it is really no longer any harder
than learning powerpoint or excel!!!

5) DON'T forget the Google Scholar database  It is much more complete
and refined today.  YOu can also use Hartzing's publish or perish to
determine your journal's relative citation rating (with some tweaking) and
your personal citation rating using an h score and many other citation
metrics.  In 4 years, Google Scholar went from being pretty bad, to pretty
good.  If all the journal's make sure their papers are online and make sure
they have inserted the journal into the google scholar search engine, then
everyone everywhere would have access to everything.

On Sat, May 9, 2009 at 6:56 PM, Wayne Tyson landr...@cox.net wrote:

 (Suggested replacement post)

  Ecolog:

  In my university I do not have access to literature sources like
 Biological Abstracts for example to reach the authors and articles . . .

  This is an excellent example, unfortunately, of how pricing intellectual
 resources out of range for outsiders is a moral indictment of much of
 academia. This man--or any man or woman or child (especially) should never
 have to hit a university firewall, be required to pay tens of dollars ($30,
 $40, and more) to download a pdf file, ad nauseam. Think of the burdensome
 expense and effort required on the part of so many even to gain the
 privilege of Internet access in the first place!

  Those truly concerned about the future of the earth and its life, even
 civilization, should realize that the history of intellectual development is
 one of free exchange of ideas and information, not its conversion into
 profit centers. It is not the struggling who should pay the comfortable, it
 is the comfortable who benefit from free intellectual synergy that compounds
 like a breeder-reactor, who should pay forward and backwards to ensure
 rather than obstruct such exchange.

  At long last, hath academia no sense of decency? Are there no institutions
 out there sufficiently well endowed and clearly beneficiaries of the wealth
 of intellectual struggle handed down from people like Dr. Voltolini
 throughout history (and still do

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required

2009-05-11 Thread Luke K. Butler
 and Modeling for Ecological Economics
http://books.elsevier.com/companions/9780123725837






--

Date:Sat, 9 May 2009 16:56:12 -0700
From:Wayne Tyson landr...@cox.net
Subject: Re: Open Access and Intellectual Imperialism  Approval  
required  Re: [ECOLOG-L] Teaching Biostatistics !!!


(Suggested replacement post)

  Ecolog:

  In my university I do not have access to literature sources  
like =
Biological Abstracts for example to reach the authors and  
articles . . =

.

  This is an excellent example, unfortunately, of how pricing =
intellectual resources out of range for outsiders is a moral =
indictment of much of academia. This man--or any man or woman or  
child =
(especially) should never have to hit a university firewall, be  
required =
to pay tens of dollars ($30, $40, and more) to download a pdf  
file, ad =
nauseam. Think of the burdensome expense and effort required on  
the part =
of so many even to gain the privilege of Internet access in the  
first =

place!=20

  Those truly concerned about the future of the earth and its  
life, even =

civilization, should realize that the history of intellectual =
development is one of free exchange of ideas and information,  
not its =
conversion into profit centers. It is not the struggling who  
should pay =

the comfortable, it is the comfortable who benefit from free =
intellectual synergy that compounds like a breeder-reactor, who  
should =
pay forward and backwards to ensure rather than obstruct such  
exchange.=20


  At long last, hath academia no sense of decency? Are there no =
institutions out there sufficiently well endowed and clearly =
beneficiaries of the wealth of intellectual struggle handed down  
from =
people like Dr. Voltolini throughout history (and still do-- 
Copernicus, =

Darwin . . .) who will turn this embarrassing state of arrogant =
possessiveness around?

  Can you imagine having to make this kind of request at every  
stage of =

your own process of intellectual enquiry?=20

  How is it possible that, this many years into one of the most =
transformational achievements of human society, that Dr.  
Voltolini =
should still be barred from journal access that costs zero to  
provide?=20


  Why not, at the individual level, that academics simply boycott =
journals which charge for access and publish in open access  
journals? =

While these may not be perfect at the moment, might not such a =
second-stage transformation accelerate their development and  
foster =

rather than retard intellectual synergy?=20

  WT

  PS: David has suggested that I explain how journals (e.g.  
those of =
the Ecological Society) are supposed to pay to publish papers if  
nobody =
has to pay to read them. This email is intended to illuminate  
the =
problem and hear from others before deigning to suggest how all  
of the =

complexities of this issue should be resolved. The first step, of =
course, is in recognizing the problem or refuting the assertion  
that =
there is a problem. I do not pretend, in as brief an email as  
possible =
and still state my position unequivocally, to cover every aspect  
of the =
subject. I do, however, know of institutions that have cancelled  
journal =

subscriptions. I believe that very large institutions (e.g. the =
University of California Library may have negotiated price  
reductions =
from some journals; I am not up-to-date on this case, but the UC  
Library =

did raise the issue quite vigorously a few years ago.=20

  I will offer the following observations, and invite correction  
if they =

are in error. I hope this helps=20

  1. The major clay paper journals are VERY profitable.=20

  2. Publishing in such journals is a political balancing act,  
not to =

mention that author charges are often involved. (I am not against =
reasonable author charges if they do not inhibit publication on  
the =
basis of merit and are collected on the basis of the ability to  
pay by, =

and the benefit to, sponsoring institutions.)

  3. It is impossibly expensive for independent researchers or  
those =
whose affiliations do not subscribe to Internet journal service  
to scan =

great volumes of literature. Abstracts are wholly inadequate for =
literature review.

  4. I recognize that publication costs must be met, but =
scientific/scholarly/intellectual publications should be  
financed by the =
nobility, not enrich them. Peer reviews should be the  
obligation of =

the reviewers to the discipline involved.=20

  5. I suggested a boycott, but only intend that measure for  
those =
entities looking at pdf downloads (for example) as ways to  
embellish =
their bottom-lines, particularly when they gouge for them  
(charge out of =
proportion to their actual marginal cost). Since intellectual  
articles =

are in relatively scant demand, they are not likely to be priced =
according to pricing theory anyway, so the benefiting  
institutions =
should pay the actual costs--plus

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-10 Thread William Silvert
I have read the followup postings to this, but want to comment on Wayne's 
indictment of the academic community. I don't know any academics or research 
scientists who like or approve of the present situation, but unfortunately 
the pressures arise on the periferies of academia. Pressure to publish in 
journals with high impact factors means that scientists who do not do so 
suffer professionally, and to generalise Luke Butler's resonse, people have 
to publish where it will do them the most good. That is why people try to 
publish in Science and Nature, even though almost everyone I know has a low 
opinion of the editorial policy of thse journals.


Since retiring I have enjoyed the freedom to publish as I please, and it is 
really nice. If a paper gets rejected, I just publish it myself on my 
website (in fact, I even publish my own on-line Journal of Simple Systems, 
http://simple.silvert.org). I should warn potential readers that reviewers 
have accused me of writing with journalistic style - journalists are those 
people who go to school to learn how to write, what could be worse? One even 
contemptuously suggested that my submission read like something in 
Scientific American!


And while I agree that we should put PDFs on our websites, legally we are 
not supposed to do so since journals even insist that we turn over the 
copyright! And some journals won't even give us PDFs of our own papers 
unless we pay for them!


It's a rotten system, but the problem lies in the evaluation process, and 
that is where reform has to take place.


By the way, I know a chap who published a short article in a non-refereed 
journal, and of course it did nothing to advance his career. Until 
eventually the paper won him a Nobel prize, and that helped!


Bill Silvert


- Original Message - 
From: Wayne Tyson landr...@cox.net

To: ECOLOG-L@LISTSERV.UMD.EDU
Sent: Sunday, May 10, 2009 12:56 AM
Subject: Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval 
required Re: [ECOLOG-L] Teaching Biostatistics !!!



(Suggested replacement post)

 Ecolog:

 In my university I do not have access to literature sources like 
Biological Abstracts for example to reach the authors and articles . . .


 This is an excellent example, unfortunately, of how pricing intellectual 
resources out of range for outsiders is a moral indictment of much of 
academia. This man--or any man or woman or child (especially) should never 
have to hit a university firewall, be required to pay tens of dollars ($30, 
$40, and more) to download a pdf file, ad nauseam. Think of the burdensome 
expense and effort required on the part of so many even to gain the 
privilege of Internet access in the first place!


 Those truly concerned about the future of the earth and its life, even 
civilization, should realize that the history of intellectual development is 
one of free exchange of ideas and information, not its conversion into 
profit centers. It is not the struggling who should pay the comfortable, it 
is the comfortable who benefit from free intellectual synergy that compounds 
like a breeder-reactor, who should pay forward and backwards to ensure 
rather than obstruct such exchange.


 At long last, hath academia no sense of decency? ... 


Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-10 Thread Wayne Tyson

Luke and Ecolog:

Me too. I hope they will respond. What do those at Tufts have to say?

As to credibility, I guess it depends upon what kind. Conformity is almost 
always a quicker path to advancement, and there is little question that 
your assessment is correct that open-access journals are a threat to the 
established order. I don't mean to imply that just any open-access journal 
is ipso-facto superior to the clays, but trends have to start someplace. And 
some open-access journals that have promising starts do not always maintain 
their vitality; others are not well-managed from the start or fall into less 
competent hands later. My sample size is, however, pretty small; a major 
reason for the initial post was to stimulate comment from those better wired 
than I.


Just what does it take for an early-career scientist to get published in a 
top journal? Are there any open-access journals that are not condemned by 
the elders?


People on the cutting edge are often burned at the stake . . .

WT


- Original Message - 
From: Luke K. Butler luke.but...@tufts.edu

To: ECOLOG-L@LISTSERV.UMD.EDU
Sent: Saturday, May 09, 2009 6:14 PM
Subject: Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval 
required Re: [ECOLOG-L] Teaching Biostatistics !!!




Why not, at the individual level, that academics simply boycott
journals which charge for access and publish in open access journals?

I would love to have this question answered by established elders in
their fields. Open-access journals, being mostly new and unfamiliar,
are no place for early-career scientists who are attempting to
establish their credibility.



Luke K. Butler
Post-Doctoral Associate
Department of Biology
Tufts University
165 Packard Ave
Medford, MA 02155



On May 9, 2009, at 7:56 PM, Wayne Tyson wrote:


  Why not, at the individual level, that academics simply boycott
journals which charge for access and publish in open access
journals? While these may not be perfect at the moment, might not
such a second-stage transformation accelerate their development and
foster rather than retard intellectual synergy?







No virus found in this incoming message.
Checked by AVG - www.avg.com
Version: 8.0.238 / Virus Database: 270.12.23/2106 - Release Date: 05/09/09 
06:54:00


Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-10 Thread Lonnie Aarssen
A new open-access journal published at Queen's University addresses 
many of the concerns raised here by Wayne and others:

IDEAS IN ECOLOGY AND EVOLUTION
http://library.queensu.ca/ojs/index.php/IEE

The opening editorial 
(http://library.queensu.ca/ojs/index.php/IEE/article/view/1949/2054) 
outlines the novel scope, novel peer-review model, and novel 
financial policy of IEE.


IEE was developed to help address three main problems in scientific 
publication:


(1) THERE IS NOW A RAMPANT AND CRIPPLING CULTURE OF ELITISM CENTERED 
ON JOURNAL IMPACT FACTOR: Science is a mission for discovery, not a 
mission for elitism.  Yet many editors and publishers have become 
more concerned about the mission for elitism and profit - boosting 
journal reputation through impact factor.  To accomplish this, many 
editors now routinely reject good manuscripts, using the excuse that 
there are limited page numbers for each volume of the journal, and so 
there is space to publish only the 'best of the best'.  Yet, 
virtually everyone now reads from digital/electronic production - not 
paper production.  IEE is on-line only, and so there are no page 
space limitations, plus IEE uses a completely transparent and 
objective protocol for acceptance/rejection of papers (see the 
'pipeline' in the opening editorial).  Rejection is never based on 
elitist goals to publish only the best of the best.


(2) IT IS NOW VERY DIFFICULT TO ATTRACT REFEREES AND TO OBTAIN HIGH 
QUALITY REVIEWS:  This is because referees have increasingly busy 
lives with little incentive to review.  Reviews therefore often have 
arbitrary, debatable, poorly argued, and/or biased recommendations to 
reject.  Many editors use these poor-quality reviews as another 
gate-keeping strategy to justify rejection based on the elitist goal 
to boost journal impact factor.  Referees can get away with mediocre 
reviews because they can hide behind anonymity, with no 
accountability to anyone.  The philosophy of IEE is that referees are 
analogous to expert consultants/witnesses in a court of law, who are 
often paid for their professional assessment, and are always 
accountable for their views, and hence never anonymous.  Accordingly, 
referees for IEE are paid professionals, and are named within 
published papers; there is no anonymity.  This provides both 
incentive and accountability for providing a high-quality 
review.  Authors pay a submission fee for this, but the money is 
returned to the community of colleagues (as remuneration for 
reviewing), rather than paid to big publishers (IEE operates purely 
on a not-for-profit basis).  In addition, authors with limited funds 
can earn remuneration from reviewing, and then use this to pay for 
the publication fee for their own paper submitted to IEE (or to any 
other open-access journal).


(3) THERE IS AN INTRINSIC BIAS AGAINST THE PUBLICATION OF NEW 
IDEAS:  In most traditional journals, there is limited interest in 
publishing 'ideas and perspectives' style papers, and high rejection 
rates often means that it can take more than a year to get a new idea 
published, by which time it is already old - scooped by someone 
else.  An alternative is to promote ideas through blogging, but most 
scientists don't blog because they get no credit/recognition for 
blogging.  IEE is the only journal in Ecology and Evolution that is 
dedicated exclusively to forum-type papers.  It is also on-line only 
and open-access, and has a fair, transparent protocol for manuscript 
acceptance/rejection.  A new idea, therefore, can be published within 
weeks - analogous to blog-style communication speed - and at the same 
time, the author earns peer-reviewed publication credit.


PLEASE CONSIDER SENDING YOUR NEXT NEW IDEA OR COMMENTARY PAPER TO IEE!



Lonnie W. Aarssen
Professor
Dept. of Biology
Queen's University
Kingston, ON
Canada, K7L 3N6

Editor
Ideas in Ecology and Evolution
http://library.queensu.ca/ojs/index.php/IEE

Campus Office:
Room 4326, Biosciences Complex

email:  aarss...@queensu.ca
web:http://biology.queensu.ca/%7Eaarssenl/
tel:613-533-6133
fax:613-533-6617  


[ECOLOG-L] Open Access and Intellectual Imperialism Approval required

2009-05-10 Thread Alexey Voinov
Instead of or in addition to boycotting and protesting, I think there is a much 
simpler and effective solution. Ask your kids. If they can share their music, 
why can't we share our papers? It's called peer-to-peer technology and requires 
just a little bit of good will from ourselves. All we need is to assemble our 
collections of pdf articles that I bet each and everyone of us has on our hard 
disks, and make them available for sharing.


Students are already doing this. See this article:
http://eaves.ca/2009/04/28/education-where-copyrighters-and-publishers-are-the-pirates/

Unfortunately these efforts seem to be sharing the fate of Napster, attacked by 
lawsuits. However this can and will still develop without any centralized 
services on a peer-to-peer basis as supported by bit-torrent and other software.


So it's really up to us to make it happen.


--
Alexey Voinov
_
!!!   please note new e-mail address: aavoi...@gmail.com  !!!
_
Chesapeake  Research  Consortium  Community  Modeling  Program 
Johns Hopkins University Dept. of Geography and Environm. Engineering
645 Contees Wharf Road, P.O. Box 28, Edgewater, MD 21037
TEL: 410 798-1283;  703 880-1178WWW: http://www.likbez.com/AV

Fellow, Gund Institute for Ecological Economics,University of Vermont
President,Int.Envir.Modeling. and Software Soc.,http://www.iemss.org/
   New book: Systems Science and Modeling for Ecological Economics
   http://books.elsevier.com/companions/9780123725837






--

Date:Sat, 9 May 2009 16:56:12 -0700
From:Wayne Tyson landr...@cox.net
Subject: Re: Open Access and Intellectual Imperialism  Approval required  Re: 
[ECOLOG-L] Teaching Biostatistics !!!

(Suggested replacement post)

  Ecolog:

  In my university I do not have access to literature sources like =
Biological Abstracts for example to reach the authors and articles . . =
.

  This is an excellent example, unfortunately, of how pricing =
intellectual resources out of range for outsiders is a moral =
indictment of much of academia. This man--or any man or woman or child =
(especially) should never have to hit a university firewall, be required =
to pay tens of dollars ($30, $40, and more) to download a pdf file, ad =
nauseam. Think of the burdensome expense and effort required on the part =
of so many even to gain the privilege of Internet access in the first =
place!=20

  Those truly concerned about the future of the earth and its life, even =
civilization, should realize that the history of intellectual =
development is one of free exchange of ideas and information, not its =
conversion into profit centers. It is not the struggling who should pay =
the comfortable, it is the comfortable who benefit from free =
intellectual synergy that compounds like a breeder-reactor, who should =
pay forward and backwards to ensure rather than obstruct such exchange.=20

  At long last, hath academia no sense of decency? Are there no =
institutions out there sufficiently well endowed and clearly =
beneficiaries of the wealth of intellectual struggle handed down from =
people like Dr. Voltolini throughout history (and still do--Copernicus, =
Darwin . . .) who will turn this embarrassing state of arrogant =
possessiveness around?

  Can you imagine having to make this kind of request at every stage of =
your own process of intellectual enquiry?=20

  How is it possible that, this many years into one of the most =
transformational achievements of human society, that Dr. Voltolini =
should still be barred from journal access that costs zero to provide?=20

  Why not, at the individual level, that academics simply boycott =
journals which charge for access and publish in open access journals? =
While these may not be perfect at the moment, might not such a =
second-stage transformation accelerate their development and foster =
rather than retard intellectual synergy?=20

  WT

  PS: David has suggested that I explain how journals (e.g. those of =
the Ecological Society) are supposed to pay to publish papers if nobody =
has to pay to read them. This email is intended to illuminate the =
problem and hear from others before deigning to suggest how all of the =
complexities of this issue should be resolved. The first step, of =
course, is in recognizing the problem or refuting the assertion that =
there is a problem. I do not pretend, in as brief an email as possible =
and still state my position unequivocally, to cover every aspect of the =
subject. I do, however, know of institutions that have cancelled journal =
subscriptions. I believe that very large institutions (e.g. the =
University of California Library may have negotiated price reductions =
from some journals; I am not up-to-date on this case, but the UC Library =
did raise the issue quite vigorously a few years ago.=20

  I

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-10 Thread Ruhland, Christopher T
All this talk of PDF files make me nostalgic for reprint request cards.   I 
still have a stack of those somewhere..  sigh 

C-



Christopher T. Ruhland, Ph.D.

Associate Professor of Biological Sciences
TS 242 Trafton Sciences Center
Minnesota State University
Mankato, MN 56001

phone: 507 389-1323
fax: 507 389-2788
email: christopher.ruhl...@mnsu.edu
webpage: 
http://ruhland.pageout.net/page.dyn/student/course/instructor_info?course_id=109326


Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-10 Thread William Silvert
Ah yes, and I remember that I used to get reprint requests from places with 
addresses in Berlin Germany, Paris France, Tokyo Japan and ... Mankato MN? I 
always wondered why Americans never felt it necessary to list their country 
as part of their addresses (or their country code as part of their phone 
numbers). At least with requests for PDFs you get a complete return address!


Bill Silvert
Portugal

- Original Message - 
From: Ruhland, Christopher T christopher.ruhl...@mnsu.edu

To: ECOLOG-L@LISTSERV.UMD.EDU
Sent: Sunday, May 10, 2009 3:51 PM
Subject: Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval 
required Re: [ECOLOG-L] Teaching Biostatistics !!!



All this talk of PDF files make me nostalgic for reprint request cards. 
I still have a stack of those somewhere..  sigh


C-

Christopher T. Ruhland, Ph.D.

Associate Professor of Biological Sciences
TS 242 Trafton Sciences Center
Minnesota State University
Mankato, MN 56001

phone: 507 389-1323
fax: 507 389-2788
email: christopher.ruhl...@mnsu.edu
webpage: 
http://ruhland.pageout.net/page.dyn/student/course/instructor_info?course_id=109326




Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-10 Thread malcolm McCallum
1) I am a founding editor of Herpetological Conservation and Biology (
http://www.herpconbio.org).It charges nothing for anything.  Our turn-around
tends to be competitive with any other journal and
if you look at the journal you will see that it is done pretty
professionally and has a very good advisory board
and editorial staff.  This is done entirely by herpetologists without any
cash outlay except for reserving the web address (~$25)
and server costs (~$100).  The layouts, editing, copy-editing, cover art,
etc are all contributed.  We are covered by all the major
indexes, and ISI inclusion is hopefully forthcoming soon, and permanent
copies are deposited in a series of major libraries.
I am clearly convinced that for-pay online journals cover almost all of
their overhead
very early in the year.  In fact, we have been approached by commercial
companies who want to pick us up, and we have refused
because it would escalate, not reduce costs.

2) If a discipline is not happy with the current journals, start a new one
and do the buttload of work required to
provide it a competitive showing.  It really isn't that hard, you can even
purchase, although we did not, pre-formatted websites on the web for
a reasonable cost.  It only takes a few folks who are dedicated, a lot of
folks make it a breeze.

3)  If you are a society that owns a journal consider moving your journal to
your own server and abandoning the regular publishers.  You can put every
old paper
on a website without any major problem.  This can be done one of two way:
 (1) as an image files and then an abstract placed on the website so Google
Scholar picks them up.  Then go to the GS website and ask them to monitor
your website.  Its simple.

4)  If you do not have the web programming background, get an undergraduate
who is interested in the topic and make them the web manager.  Today, many
HighSchool students know web services and it is really no longer any harder
than learning powerpoint or excel!!!

5) DON'T forget the Google Scholar database  It is much more complete
and refined today.  YOu can also use Hartzing's publish or perish to
determine your journal's relative citation rating (with some tweaking) and
your personal citation rating using an h score and many other citation
metrics.  In 4 years, Google Scholar went from being pretty bad, to pretty
good.  If all the journal's make sure their papers are online and make sure
they have inserted the journal into the google scholar search engine, then
everyone everywhere would have access to everything.

On Sat, May 9, 2009 at 6:56 PM, Wayne Tyson landr...@cox.net wrote:

 (Suggested replacement post)

  Ecolog:

  In my university I do not have access to literature sources like
 Biological Abstracts for example to reach the authors and articles . . .

  This is an excellent example, unfortunately, of how pricing intellectual
 resources out of range for outsiders is a moral indictment of much of
 academia. This man--or any man or woman or child (especially) should never
 have to hit a university firewall, be required to pay tens of dollars ($30,
 $40, and more) to download a pdf file, ad nauseam. Think of the burdensome
 expense and effort required on the part of so many even to gain the
 privilege of Internet access in the first place!

  Those truly concerned about the future of the earth and its life, even
 civilization, should realize that the history of intellectual development is
 one of free exchange of ideas and information, not its conversion into
 profit centers. It is not the struggling who should pay the comfortable, it
 is the comfortable who benefit from free intellectual synergy that compounds
 like a breeder-reactor, who should pay forward and backwards to ensure
 rather than obstruct such exchange.

  At long last, hath academia no sense of decency? Are there no institutions
 out there sufficiently well endowed and clearly beneficiaries of the wealth
 of intellectual struggle handed down from people like Dr. Voltolini
 throughout history (and still do--Copernicus, Darwin . . .) who will turn
 this embarrassing state of arrogant possessiveness around?

  Can you imagine having to make this kind of request at every stage of your
 own process of intellectual enquiry?

  How is it possible that, this many years into one of the most
 transformational achievements of human society, that Dr. Voltolini should
 still be barred from journal access that costs zero to provide?

  Why not, at the individual level, that academics simply boycott journals
 which charge for access and publish in open access journals? While these may
 not be perfect at the moment, might not such a second-stage transformation
 accelerate their development and foster rather than retard intellectual
 synergy?

  WT

  PS: David has suggested that I explain how journals (e.g. those of the
 Ecological Society) are supposed to pay to publish papers if nobody has to
 pay to read them. This email is intended to 

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-10 Thread Jarrett Byrnes
I'd also like to point out that there are a wide number of open access  
journals in which ecologists can publish.  See here for a  
comprehensive listing:


http://www.doaj.org/doaj?func=findJournalshybrid=query=ecology

with titles such as
Research Letters in Ecology - http://www.hindawi.com/journals/rleco/
The Open Ecology Journal - http://www.bentham.org/open/toecolj/
BMC Ecology - http://www.biomedcentral.com/1472-6785

Many of these journals are wonderful, but also underutilized.  Some of  
that is certainly because they are new, and therefore their impact  
factor is not well established.  Or, some are so new that they are not  
listed in ISI Web of Science or other indices, thus remaining somewhat  
invisible.


As a postdoc, I can vouch that when I submit, my mind immediately  
zooms to the typical rundown of journals to submit to by the prestige  
that I feel it will lend to my career.  Quite honestly, PLoS Biology  
and PLoS One are the only two open access journals that are typically  
on my list.  So, I am as much to blame as anyone else.  What  
suggestions would the community have for rectifying this?  Or is this  
a problem that needs solving?




Jarrett Byrnes
Postdoctoral Associate, Santa Barbara Coastal LTER
Marine Science Institute
University of California Santa Barbara
Santa Barbara, CA 93106-6150
http://www.lifesci.ucsb.edu/eemb/labs/cardinale/people/byrnes/index.html

On May 10, 2009, at 8:11 AM, Lonnie Aarssen wrote:

A new open-access journal published at Queen's University addresses  
many of the concerns raised here by Wayne and others:

IDEAS IN ECOLOGY AND EVOLUTION
http://library.queensu.ca/ojs/index.php/IEE

The opening editorial (http://library.queensu.ca/ojs/index.php/IEE/article/view/1949/2054 
) outlines the novel scope, novel peer-review model, and novel  
financial policy of IEE.


IEE was developed to help address three main problems in scientific  
publication:


(1) THERE IS NOW A RAMPANT AND CRIPPLING CULTURE OF ELITISM CENTERED  
ON JOURNAL IMPACT FACTOR: Science is a mission for discovery, not a  
mission for elitism.  Yet many editors and publishers have become  
more concerned about the mission for elitism and profit - boosting  
journal reputation through impact factor.  To accomplish this, many  
editors now routinely reject good manuscripts, using the excuse that  
there are limited page numbers for each volume of the journal, and  
so there is space to publish only the 'best of the best'.  Yet,  
virtually everyone now reads from digital/electronic production -  
not paper production.  IEE is on-line only, and so there are no page  
space limitations, plus IEE uses a completely transparent and  
objective protocol for acceptance/rejection of papers (see the  
'pipeline' in the opening editorial).  Rejection is never based on  
elitist goals to publish only the best of the best.


(2) IT IS NOW VERY DIFFICULT TO ATTRACT REFEREES AND TO OBTAIN HIGH  
QUALITY REVIEWS:  This is because referees have increasingly busy  
lives with little incentive to review.  Reviews therefore often have  
arbitrary, debatable, poorly argued, and/or biased recommendations  
to reject.  Many editors use these poor-quality reviews as another  
gate-keeping strategy to justify rejection based on the elitist goal  
to boost journal impact factor.  Referees can get away with mediocre  
reviews because they can hide behind anonymity, with no  
accountability to anyone.  The philosophy of IEE is that referees  
are analogous to expert consultants/witnesses in a court of law, who  
are often paid for their professional assessment, and are always  
accountable for their views, and hence never anonymous.   
Accordingly, referees for IEE are paid professionals, and are named  
within published papers; there is no anonymity.  This provides both  
incentive and accountability for providing a high-quality review.   
Authors pay a submission fee for this, but the money is returned to  
the community of colleagues (as remuneration for reviewing), rather  
than paid to big publishers (IEE operates purely on a not-for-profit  
basis).  In addition, authors with limited funds can earn  
remuneration from reviewing, and then use this to pay for the  
publication fee for their own paper submitted to IEE (or to any  
other open-access journal).


(3) THERE IS AN INTRINSIC BIAS AGAINST THE PUBLICATION OF NEW  
IDEAS:  In most traditional journals, there is limited interest in  
publishing 'ideas and perspectives' style papers, and high rejection  
rates often means that it can take more than a year to get a new  
idea published, by which time it is already old - scooped by someone  
else.  An alternative is to promote ideas through blogging, but most  
scientists don't blog because they get no credit/recognition for  
blogging.  IEE is the only journal in Ecology and Evolution that is  
dedicated exclusively to forum-type papers.  It is also on-line only  
and 

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-09 Thread Wayne Tyson
(Suggested replacement post)

  Ecolog:

  In my university I do not have access to literature sources like Biological 
Abstracts for example to reach the authors and articles . . .

  This is an excellent example, unfortunately, of how pricing intellectual 
resources out of range for outsiders is a moral indictment of much of 
academia. This man--or any man or woman or child (especially) should never have 
to hit a university firewall, be required to pay tens of dollars ($30, $40, and 
more) to download a pdf file, ad nauseam. Think of the burdensome expense and 
effort required on the part of so many even to gain the privilege of Internet 
access in the first place! 

  Those truly concerned about the future of the earth and its life, even 
civilization, should realize that the history of intellectual development is 
one of free exchange of ideas and information, not its conversion into profit 
centers. It is not the struggling who should pay the comfortable, it is the 
comfortable who benefit from free intellectual synergy that compounds like a 
breeder-reactor, who should pay forward and backwards to ensure rather than 
obstruct such exchange. 

  At long last, hath academia no sense of decency? Are there no institutions 
out there sufficiently well endowed and clearly beneficiaries of the wealth of 
intellectual struggle handed down from people like Dr. Voltolini throughout 
history (and still do--Copernicus, Darwin . . .) who will turn this 
embarrassing state of arrogant possessiveness around?

  Can you imagine having to make this kind of request at every stage of your 
own process of intellectual enquiry? 

  How is it possible that, this many years into one of the most 
transformational achievements of human society, that Dr. Voltolini should still 
be barred from journal access that costs zero to provide? 

  Why not, at the individual level, that academics simply boycott journals 
which charge for access and publish in open access journals? While these may 
not be perfect at the moment, might not such a second-stage transformation 
accelerate their development and foster rather than retard intellectual 
synergy? 

  WT

  PS: David has suggested that I explain how journals (e.g. those of the 
Ecological Society) are supposed to pay to publish papers if nobody has to pay 
to read them. This email is intended to illuminate the problem and hear from 
others before deigning to suggest how all of the complexities of this issue 
should be resolved. The first step, of course, is in recognizing the problem or 
refuting the assertion that there is a problem. I do not pretend, in as brief 
an email as possible and still state my position unequivocally, to cover every 
aspect of the subject. I do, however, know of institutions that have cancelled 
journal subscriptions. I believe that very large institutions (e.g. the 
University of California Library may have negotiated price reductions from some 
journals; I am not up-to-date on this case, but the UC Library did raise the 
issue quite vigorously a few years ago. 

  I will offer the following observations, and invite correction if they are in 
error. I hope this helps 

  1. The major clay paper journals are VERY profitable. 

  2. Publishing in such journals is a political balancing act, not to mention 
that author charges are often involved. (I am not against reasonable author 
charges if they do not inhibit publication on the basis of merit and are 
collected on the basis of the ability to pay by, and the benefit to, sponsoring 
institutions.)

  3. It is impossibly expensive for independent researchers or those whose 
affiliations do not subscribe to Internet journal service to scan great volumes 
of literature. Abstracts are wholly inadequate for literature review.

  4. I recognize that publication costs must be met, but 
scientific/scholarly/intellectual publications should be financed by the 
nobility, not enrich them. Peer reviews should be the obligation of the 
reviewers to the discipline involved. 

  5. I suggested a boycott, but only intend that measure for those entities 
looking at pdf downloads (for example) as ways to embellish their bottom-lines, 
particularly when they gouge for them (charge out of proportion to their actual 
marginal cost). Since intellectual articles are in relatively scant demand, 
they are not likely to be priced according to pricing theory anyway, so the 
benefiting institutions should pay the actual costs--plus a margin for a 
cushion-endowment perhaps. 

  6. I do not think David or anyone else should have to be bothered with 
sending materials to requestors who are deprived of equal privileges/rights. 
While this is generous in the extreme, there is still a faint sniff of 
(unintended) patronizing in that, and the requestor must be driven to make the 
request in the first place. Most simply suffer in silence. 

  7. My primary question to Ecolog remains Is this intellectual imperialism or 
not? 

  8. One 

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-09 Thread Jane Shevtsov
It is sometimes not practical to publish in open access journals,
because of cost or other reasons. (I wish PLoS would say exactly under
what circumstances they waive publication charges.) But most of us
have web pages. Once you have a PDF of your article, put it on your
web page! Thanks to Google, anybody will be able to find it.

Jane Shevtsov

On Sat, May 9, 2009 at 7:56 PM, Wayne Tyson landr...@cox.net wrote:
 (Suggested replacement post)

  Ecolog:

  In my university I do not have access to literature sources like Biological 
 Abstracts for example to reach the authors and articles . . .

  This is an excellent example, unfortunately, of how pricing intellectual 
 resources out of range for outsiders is a moral indictment of much of 
 academia. This man--or any man or woman or child (especially) should never 
 have to hit a university firewall, be required to pay tens of dollars ($30, 
 $40, and more) to download a pdf file, ad nauseam. Think of the burdensome 
 expense and effort required on the part of so many even to gain the privilege 
 of Internet access in the first place!

  Those truly concerned about the future of the earth and its life, even 
 civilization, should realize that the history of intellectual development is 
 one of free exchange of ideas and information, not its conversion into profit 
 centers. It is not the struggling who should pay the comfortable, it is the 
 comfortable who benefit from free intellectual synergy that compounds like a 
 breeder-reactor, who should pay forward and backwards to ensure rather than 
 obstruct such exchange.

  At long last, hath academia no sense of decency? Are there no institutions 
 out there sufficiently well endowed and clearly beneficiaries of the wealth 
 of intellectual struggle handed down from people like Dr. Voltolini 
 throughout history (and still do--Copernicus, Darwin . . .) who will turn 
 this embarrassing state of arrogant possessiveness around?

  Can you imagine having to make this kind of request at every stage of your 
 own process of intellectual enquiry?

  How is it possible that, this many years into one of the most 
 transformational achievements of human society, that Dr. Voltolini should 
 still be barred from journal access that costs zero to provide?

  Why not, at the individual level, that academics simply boycott journals 
 which charge for access and publish in open access journals? While these may 
 not be perfect at the moment, might not such a second-stage transformation 
 accelerate their development and foster rather than retard intellectual 
 synergy?

  WT

  PS: David has suggested that I explain how journals (e.g. those of the 
 Ecological Society) are supposed to pay to publish papers if nobody has to 
 pay to read them. This email is intended to illuminate the problem and hear 
 from others before deigning to suggest how all of the complexities of this 
 issue should be resolved. The first step, of course, is in recognizing the 
 problem or refuting the assertion that there is a problem. I do not pretend, 
 in as brief an email as possible and still state my position unequivocally, 
 to cover every aspect of the subject. I do, however, know of institutions 
 that have cancelled journal subscriptions. I believe that very large 
 institutions (e.g. the University of California Library may have negotiated 
 price reductions from some journals; I am not up-to-date on this case, but 
 the UC Library did raise the issue quite vigorously a few years ago.

  I will offer the following observations, and invite correction if they are 
 in error. I hope this helps

  1. The major clay paper journals are VERY profitable.

  2. Publishing in such journals is a political balancing act, not to mention 
 that author charges are often involved. (I am not against reasonable author 
 charges if they do not inhibit publication on the basis of merit and are 
 collected on the basis of the ability to pay by, and the benefit to, 
 sponsoring institutions.)

  3. It is impossibly expensive for independent researchers or those whose 
 affiliations do not subscribe to Internet journal service to scan great 
 volumes of literature. Abstracts are wholly inadequate for literature 
 review.

  4. I recognize that publication costs must be met, but 
 scientific/scholarly/intellectual publications should be financed by the 
 nobility, not enrich them. Peer reviews should be the obligation of the 
 reviewers to the discipline involved.

  5. I suggested a boycott, but only intend that measure for those entities 
 looking at pdf downloads (for example) as ways to embellish their 
 bottom-lines, particularly when they gouge for them (charge out of proportion 
 to their actual marginal cost). Since intellectual articles are in relatively 
 scant demand, they are not likely to be priced according to pricing theory 
 anyway, so the benefiting institutions should pay the actual costs--plus a 
 margin for a cushion-endowment perhaps.

  

Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-09 Thread Luke K. Butler
Why not, at the individual level, that academics simply boycott  
journals which charge for access and publish in open access journals?


I would love to have this question answered by established elders in  
their fields. Open-access journals, being mostly new and unfamiliar,  
are no place for early-career scientists who are attempting to  
establish their credibility.




Luke K. Butler
Post-Doctoral Associate
Department of Biology
Tufts University
165 Packard Ave
Medford, MA 02155



On May 9, 2009, at 7:56 PM, Wayne Tyson wrote:

  Why not, at the individual level, that academics simply boycott  
journals which charge for access and publish in open access  
journals? While these may not be perfect at the moment, might not  
such a second-stage transformation accelerate their development and  
foster rather than retard intellectual synergy?


Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval required Re: [ECOLOG-L] Teaching Biostatistics !!!

2009-05-09 Thread Wayne Tyson

JS and Ecolog:

Yes, but that's not the question.

For example, from the AAAS website:

The content you requested requires a AAAS member subscription to this site 
or Science Pay per Article purchase. To find out what content you currently 
have access to - view your access rights. If you would like to recommend 
that your institution subscribe to this content, please visit our Recommend 
a Subscription page.


One can buy 24 hour access rights to a single paper for $15 (cheaper 
than most, but it has no connection to the actual cost of providing the 
service--it is no doubt justified by recovering the costs of publication). 
Or join AAAS and every other organization (some suck as much as $40 or more 
from individuals, not to mention the major fees required of institutions) 
that holds rights to a paper one MIGHT be interested in. It adds up to an 
onerous financial burden either way. Such policies effectively exclude any 
riff-raff who might have a serious interest in a simple or complex subject, 
and cross-fertilizers must be millionaires and willing to spend it. Such 
heathen are conscribed to their local library--if they have one, putting 
them at an enormous disadvantage to the connected and the in.


It's competitive exclusion. My tax money supported the research, and I (and 
I suggest that I and Dr. Voltolini and anyone else should have free access 
to it, largely because it costs AAAS and the government no additional cost 
to supply a download). If the law about copyrights to government-supported 
publications has been outflanked by AAAS and others, it's time for a 
presidential and/or legislative or court of law rethink, something on the 
order of tax havens. Aside from the government angle, as a matter of 
tradition and, considering that we have been transmogrified (apparently 
while asleep) into a corporate feudal state, the serfs of the world should 
rise up (or are they?) and see if they can coax a little noblesse oblige out 
of the keepers of the intellectual gold. Scholarly publication, it seems, 
has become more and more like a guild and less and less about the 
advancement of knowledge for the benefit of humankind.


WT

PS: Here, copied from their website, is a sample of how the Library of the 
University of California sees the issue of scholarly journals:


The Facts:

How the Crisis in Scholarly Communication Affects You
High costs are a barrier to access
Egregious and rising prices of scholarly journals place a barrier between 
faculty work and their potential readers, putting research and teaching at 
risk. In the Berkeley library, we have done our best to continue to provide 
access to materials for our scholars but if economic and publishing trends 
continue at the same pace, the Library may be required to cancel journals 
and reduce the number of books purchased. Researchers, in turn, may find it 
harder and harder to locate materials.


 a.. The cost of scholarly publications is (and has been) rising at rates 
that are several times higher than inflation.
 b.. Significant price increases in journals every year decrease the 
purchasing power of libraries overall. Serials with high inflation rates 
negatively impact the overall acquisition of monographs and other serials.

 a.. Monograph and Serials Expenditures (PDF)
 Data from the Association for Research Libraries show that from 1986 to 
2005:

   a.. The average cost of serials rose 167%.
   b.. The average cost of a monograph rose 81%.
   c.. The consumer price index for this time period rose 78%.
   d.. Bottom line: prices are going up, and libraries can't keep up.


 b.. Sticker Shock: to put subscription costs in perspective, consider that 
a one year subscription to some journals can cost as much as the price of a 
car (from the UCSF Library).

 a.. The number of new journals published every year is increasing.
 b.. Journal inflation rates impact all disciplines:

   LC Classification Average
   cost/title
   2002 Average
   cost/title
   2006 Percentage
   increase
   2002-2006
   Anthropology $300 $416 39%
   Chemistry $2432 $3254 34%
   Engineering $1305 $1756 35%
   History $132 $201 52%
   Philosophy and Religion $156 $226 45%

 See the annual Library Journal Periodical Price Survey for an analysis of 
journal prices.
 c.. There is a direct correlation between mergers and acquisitions among 
publishers and rises in serial prices.



- Original Message - 
From: Jane Shevtsov jane@gmail.com

To: Wayne Tyson landr...@cox.net
Cc: ECOLOG-L@listserv.umd.edu
Sent: Saturday, May 09, 2009 6:34 PM
Subject: Re: [ECOLOG-L] Open Access and Intellectual Imperialism Approval 
required Re: [ECOLOG-L] Teaching Biostatistics !!!



It is sometimes not practical to publish in open access journals,
because of cost or other reasons. (I wish PLoS would say exactly under
what circumstances they waive publication charges.) But most of us
have web pages. Once you have a PDF of your