[caret-users] Macaque-Human Deformation and Registration

2007-02-16 Thread Reza Rajimehr
? 3) It would be great if you also refer me to the most up-to-date documentation/tutorial describing the macaque-human deformation analysis. Thank you, Reza - Tootell/Vanduffel Lab **** Reza Rajimehr, MD NMR Athinoula A. Martinos Center Department of Radiology Massa

[caret-users] A Question about Spherical Registration

2007-02-21 Thread Reza Rajimehr
registration, or the new PALS surfaces (e.g. inflated, flattened, ...) will be automatically linked to the deformed spherical surface that I already have? Thanks, Reza Reza Rajimehr, MD NMR Athinoula A. Martinos Center Department of Radiology Massachusetts General

Re: [caret-users] Flattening and Spherical Registration of the Monkey Brain

2007-02-23 Thread Reza Rajimehr
msdb.wustl.edu/sums/archivelist.do?archive_id=6486316 > * Visualization/Analysis spec RIGHT: > http://sumsdb.wustl.edu/sums/archivelist.do?archive_id=6486393 > > Most of the tests can be run using the caret_command utility. > > Donna > > On 02/21/2007 01:25 AM, R

[caret-users] A Problem with .borderproj files

2007-03-01 Thread Reza Rajimehr
the individual and atlas brains are different. Thanks for any help, Best, Reza Reza Rajimehr, MD NMR Athinoula A. Martinos Center Department of Radiology Massachusetts General Hospital (MGH) Building 149, 13th St. Charlestown, MA 02129 Email: [EMAIL PROTECTED]

[caret-users] Reversing the polarity of the functional color scale bar in Caret

2007-03-03 Thread Reza Rajimehr
opposite pattern of hemodynamic response for the BOLD and MION fMRI. My question is how I can reverse the polarity of the color scale bar (e.g. in the macaque map), so that I have a consistent color coding for the human and macaque maps. Thanks, Reza Reza Rajimehr, MD

[caret-users] About Monkey to Human Deformation

2007-03-10 Thread Reza Rajimehr
PALS .spec file should be used in the Atlas tab. Thanks for your help, Reza Reza Rajimehr, MD NMR Athinoula A. Martinos Center Department of Radiology Massachusetts General Hospital (MGH) Building 149, 13th St. Charlestown, MA 02129 Email: [EMAIL PROTECTED]

Re: [caret-users] About Monkey to Human Deformation

2007-03-14 Thread Reza Rajimehr
OMPARE_MACAQUE_HUMAN directory (as a part of CARET_TUTORIAL_SEPT06 directory). I added/appended my metric files to this .spec file before applying deformation. In both cases, I got the same error. Thanks for your helpful comments/suggestions, Reza > Reza, > > On Mar 10, 2007, at 9:31 PM, R

Re: [caret-users] About Monkey to Human Deformation

2007-03-14 Thread Reza Rajimehr
t; AREAL_ESTIMATION > BORDER_FLAT > BORDER_PROJECTION > BORDER_SPHERICAL > CELL > CELL_PROJECTION > COORDINATE > COORDINATE_FLAT > FOCI > FOCI_PROJECTION > LAT_LON >