Bug#508777: ITP: libicu4j-java -- Library for unicode support and internalisation

2008-12-15 Thread Andreas Tille
Package: wnpp
Severity: wishlist
Owner: Andreas Tille til...@rki.de


* Package name: libicu4j-java
  Version : 3.8.1
  Upstream Author : IBM and contributors
* URL : http://www.icu-project.org/
* License : ICU4J license - ICU4J 1.8.1 and later
   Permission is hereby granted, free of charge, to any person obtaining
   a copy of this software and associated documentation files (the
   Software), to deal in the Software without restriction, including
   without limitation the rights to use, copy, modify, merge, publish,
   distribute, and/or sell copies of the Software, and to permit persons
   to whom the Software is furnished to do so, provided that the above
   copyright notice(s) and this permission notice appear in all copies of
   the Software and that both the above copyright notice(s) and this
   permission notice appear in supporting documentation.
  Programming Lang: C, C++, Java
  Description : Library for unicode support and internalisation
 ICU is a mature, widely used set of C/C++ and Java libraries for
 Unicode support, software internationalization and globalization
 (i18n/g11n). It grew out of the JDK 1.1 internationalization APIs, which
 the ICU team contributed, and the project continues to be developed
 for the most advanced Unicode/i18n support. ICU is widely portable and
 gives applications the same results on all platforms and between C/C++
 and Java software.

Remark: This software is currently provided inside the source package
 of eclipse.  There is no clear reason why it is tied into another packages
 upstream version.  Moreover there is a seperate package maintained in
 Ubuntu and thus it is simple to steal this package.  The packaging
 stuff is available in SVN via

Vcs-Svn: svn://svn.debian.org/svn/pkg-java/trunk/icu4j
Vcs-Browser: http://svn.debian.org/wsvn/pkg-java/trunk/icu4j/?rev=0sc=0

Kind regards

 Andreas.

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Bug#507436: ITP: jalview -- multiple alignment editor

2009-01-13 Thread Andreas Tille

Hi Vincent,

are there any news about the packaging.  Any preliminary stuff
to test?  Any help needed?  Did you decided which repository
you want to use?

Kind regards

 Andreas.

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Bug#507436: ITP: jalview -- multiple alignment editor

2009-01-13 Thread Andreas Tille

On Tue, 13 Jan 2009, Vincent Fourmond wrote:


 About the repository, I think the best is pkg-java, as the skills
required are more on the Java side than on the Biological side - but
please correct me if I'm wrong.


Well, there is no right or wrong - finally we have to store the
packaging stuff in a publicly available repository.  Via Vcs tags
we will find the location and the upcoming 'mr' tool will probably
help fetching stuff from different repositories.  So I would just
*ask* on pkg-java whether they like the idea to maintain the
package there (yes, Java knowledge on Debian Med is not so wide
spread).  If there is no response this is probably not the proper
place.  Perhaps Steffen might like to say something more than
 'why isn't anybody mentioning pkg-escience ?'
My answer to this question is simple: This group is not vocal
enough and how can I assume that there is some Java competence?


The main problem is that it has loads
of dependencies:

12:40 f...@vncent ~/tmp/jalview find -name '*.jar'
./lib/castor-1.1-cycle-xml.jar


http://www.castor.org/ (not yet packaged) ?


./lib/commons-logging.jar


libcommons-logging-java ?


./lib/commons-discovery.jar


libcommons-discovery-java ?


./lib/wsdl4j.jar


libwsdl4j-java


./lib/regex.jar


libgnu-regexp-java | libjrexx-java libjrexx-java | liboro-java | libregexp-java 
?


./lib/saaj.jar


https://saaj.dev.java.net/ (not packaged yet) ?
Seems to have to do something with SOAP, perhaps there are alternative 
implementations
like the packaged libaxis-java ???


./lib/jaxrpc.jar


Reading http://de.wikipedia.org/wiki/JAX-RPC the package
  libxmlrpc3-common-java
might provide what we need.  At least the package contains 
/usr/share/java/jaxrpc.jar


./lib/mail.jar


Hmm:
$ apt-file search '/mail.jar'
jspwiki: /usr/share/jspwiki/WEB-INF/lib/mail.jar  - probably not
roxen4: /usr/share/roxen4/java/classes/mail.jar

Perhaps this might be a reasonable solution:

libgnumail-java: /usr/share/java/gnumail.jar


./lib/axis.jar


libaxis-java: /usr/share/java/axis.jar


./lib/vamsas-client.jar


http://www.vamsas.ac.uk/ ?
-- If this is a precondition for JalView Debian Med should
perhaps concentrate on this part.  Unfortunately the web
page is a little bit sparse about vamsas itself - but
seems deeply connected with JalView.  I will have a look
at the other free part Topali (AstexViewer seems to
be non-free)


./lib/Jmol-11.0.2.jar


We have an inofficial package of an outdated version of jmol:

   http://debian.wgdd.de/temp/jmol/

Daniel, any news from Jmol?


./lib/activation.jar


libgnujaf-java: /usr/share/java/activation.jar


./lib/jhall.jar


javahelp2: /usr/share/java/jhall.jar


./lib/xercesImpl.jar


libxerces2-java: /usr/share/java/xercesImpl.jar


./lib/xml-apis.jar


libxalan2-java: /usr/share/java/xml-apis.jar
maven2: /usr/share/maven2/lib/xml-apis.jar


./lib/log4j-1.2.8.jar


liblog4j1.2-java  (and others)


./utils/castor-1.1-cycle-codegen-anttask.jar


No idea - perhaps
   http://castor.codehaus.org/srcgen-maven-plugin.html
ist helpful.  While having no idea what maven2 might be at all I have read
this keyword on the Debian-Java list recently quite frequently.


./utils/jhindexer.jar


No idea.


./utils/castor-1.1-cycle-codegen.jar


see castor above


./utils/wsdl4j.jar


libwsdl4j-java


./utils/proguard.jar


proguard: /usr/share/java/proguard.jar


./utils/roxes-ant-tasks-1.2-2004-01-30.jar
./utils/jalopy/lib/oro-2.0.6.jar
./utils/jalopy/lib/sax-2.0.1.jar
./utils/jalopy/lib/jalopy-ant-0.6.2.jar
./utils/jalopy/lib/log4j-1.2.6.jar
./utils/jalopy/lib/jaxp-1.2.jar
./utils/jalopy/lib/aelfred-1.2.jar
./utils/jalopy/lib/jalopy-1.0b11.jar
./utils/jalopy/lib/jdom-1.0b8.jar
./utils/jhall.jar
./utils/axis-ant.jar

 I'll start to sort it out this week-end. You can join in too,s


Just joined. ;-)


for
instance, to see which of those are really necessary, file ITP, block
this bug by the ITPs (CCing this bug), and package them (and their
dependencies...). I guess the best would be to use this bug
mailing-list for coordination. I think it is possible we can get rid
of the dependencies from the utils/ directory...


Lets see.  I'm occupied with other tasks for this afternoon, but may
be I might provide some more info later.

Kind regards

   Andreas.

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Bug#512069: ITP: r-cran-plotrix -- GNU R package providing various plotting functions

2009-01-16 Thread Andreas Tille
Package: wnpp
Severity: wishlist
Owner: Andreas Tille til...@rki.de

* Package name: r-cran-plotrix
  Version : 2.5
  Upstream Author : Jim Lemon, Ben Bolker, Sander Oom, Eduardo Klein, and others
* URL : http://cran.r-project.org/web/packages/plotrix/
* License : GPL (=2)
  Programming Lang: R
  Description : GNU R package providing various plotting functions
   Lots of plots, various labeling, axis and color scaling functions
   for the GNU R package.

I need this package for my work and would like to team maintain this
package in the Debian Science Packaging team and use their Alioth
repository.  Other suggestions for a common R repository are welcome.

Kind regards

Andreas.

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Bug#512404: ITP: r-cran-colorspace -- GNU R Color Space Manipulation

2009-01-20 Thread Andreas Tille
Package: wnpp
Severity: wishlist
Owner: Andreas Tille til...@rki.de


* Package name: r-cran-colorspace
  Version : 1.0.0
  Upstream Author : Ross Ihaka ihaka at stat.auckland.ac.nz
* URL : http://cran.r-project.org/web/packages/colorspace
* License : BSD
  Programming Lang: R
  Description : GNU R Color Space Manipulation
 Carries out mapping between assorted color spaces including RGB, HSV, HLS,
 CIEXYZ, CIELUV, HCL (polar CIELUV), CIELAB and polar CIELAB. Qualitative,
 sequential, and diverging color palettes based on HCL colors are provided.

I plan to leave the source package as the upstream name 'colorspace'

I intent to put this package under team maintenance of
  Debian Science Team debian-science-maintain...@lists.alioth.debian.org
because it seems to be interesting for the statsitics section.

Kind regards

   Andreas.

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Bug#512405: ITP: r-cran-msm -- GNU R Multi-state Markov and hidden Markov models in continuous time

2009-01-20 Thread Andreas Tille
Package: wnpp
Severity: wishlist
Owner: Andreas Tille til...@rki.de


* Package name: r-cran-msm
  Version : 0.8.1
  Upstream Author : Christopher Jackson chris.jackson at mrc-bsu.cam.ac.uk 
* URL : http://cran.r-project.org/web/packages/msm/
* License : GPL2+
  Programming Lang: R
  Description : GNU R Multi-state Markov and hidden Markov models in 
continuous time
 Functions for fitting general continuous-time Markov and hidden Markov
 multi-state models to longitudinal data. Both Markov transition rates and the
 hidden Markov output process can be modelled in terms of covariates. A variety
 of observation schemes are supported, including processes observed at arbitrary
 times, completely-observed processes, and censored states.

I plan to leave the source package as the upstream name 'msm'

I intent to put this package under team maintenance of
  Debian Science Team debian-science-maintainers@@lists.alioth.debian.org
because it seems to be interesting for the statsitics section.

Kind regards

   Andreas.


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Bug#512431: ITP: r-cran-sp -- GNU R classes and methods for spatial data

2009-01-20 Thread Andreas Tille
Package: wnpp
Severity: wishlist
Owner: Andreas Tille til...@rki.de


* Package name: r-cran-sp
  Version : 0.9.29
  Upstream Author : Edzer J. Pebesma edzer.pebesma at uni-muenster.de
* URL : http://r-spatial.sourceforge.net/
* License : GPL2+
  Programming Lang: R
  Description : GNU R classes and methods for spatial data
 A package that provides classes and methods for spatial data. The classes
 document where the spatial location information resides, for 2D or 3D data.
 Utility functions are provided, e.g. for plotting data as maps, spatial
 selection, as well as methods for retrieving coordinates, for subsetting,
 print, summary, etc.

This package should be putted under team maintenance of Debian Science
but pkg-grass-devel might be interested as well

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Bug#512433: ITP: r-cran-vcd -- GNU R Visualizing Categorical Data

2009-01-20 Thread Andreas Tille
Package: wnpp
Severity: wishlist
Owner: Andreas Tille til...@rki.de

* Package name: r-cran-vcd
  Version : 1.2.1
  Upstream Author : David Meyer David.Meyer at R-project.org
* URL : http://cran.r-project.org/web/packages/vcd
* License : GPL2+
  Programming Lang: R
  Description : GNU R Visualizing Categorical Data
 Visualization techniques, data sets, summary and inference procedures
 aimed particularly at categorical data. Special emphasis is given to
 highly extensible grid graphics. The package was inspired by the book
 Visualizing Categorical Data by Michael Friendly.

This package should be maintained under Debian Science team maintenance.

According to the RFC for an R packaging policy at
   https://stat.ethz.ch/pipermail/r-devel/2003-December/028424.html
I'd like to keep the source package name 'vcd' as the upstream
package name.  On the other hand I'm quite unsure if there are
2 or 3 letter names.  In one of my former ITPs (sp) there is a
conflict with sp - James Clark's SGML parsing tools.

Any comments are welcome.

Kind regards

  Andreas.


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Bug#512430: ITP: r-cran-spc -- GNU R Statistical Process Control

2009-01-20 Thread Andreas Tille
Package: wnpp
Severity: wishlist
Owner: Andreas Tille til...@rki.de


* Package name: r-cran-spc
  Version : 0.21
  Upstream Author : en Knoth Sven.Knoth at gmx.de 
* URL : http://cran.r-project.org/web/packages/spc/
* License : GPL
  Programming Lang: R
  Description : GNU R Statistical Process Control
 Evaluation of control charts by means of the zero-state, steady-state ARL
 (Average Run Length). Setting up control charts for given in-control ARL
 and plotting of the related figures. The control charts under consideration
 are one- and two-sided EWMA and CUSUM charts for monitoring the mean of
 normally distributed independent data. Now, the ARL calculation of
 EWMA-S^2 control charts is added. Other charts and parameters are in
 preparation. Further SPC areas will be covered as well (sampling plans,
 capability indices ...).

As my other ITPs I plan to put this under Debian Science team maitenance.

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Bug#512433: ITP: r-cran-vcd -- GNU R Visualizing Categorical Data

2009-01-21 Thread Andreas Tille

On Tue, 20 Jan 2009, Dirk Eddelbuettel wrote:


The Policy Draft you reference is somewhat outdated and in need of a
refresher.


I've thought this because it is quite old from the tome stamp but
I failwd to found something more recent.


As for the names: On a few of my more recent ITPs for R / CRAN
packages, folks suggested to not use the 'short' names. Hence I would
suggest

r-cran-msm
r-cran-sp
r-cran-spc
r-cran-vcd

for binary _and source_ packages and you may as well stick with

r-cran-colorspace


Fine, I will regard this for these packages.  WHat would you
suggest for the recently uploaded package plotrix which is currently
in new?  should I immediately ask ftpmaster to drop this upload
and rename the source package as well?


as colorspace is so generic.


I completely agree.  I just added the explicite hint to my
ITPs (if I did not forgot it) to ask for comments on the
naming scheme because I was not really convinced that it is
the best idea these days (at the time of writing it was probably
reasonable).

Kind regards

   Andreas.

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Bug#512490: zope2.10: Problems with zope-formulator with this version of zope (fwd)

2009-01-22 Thread Andreas Tille

Hi Martijn,

I would like to report a problem with the latest version of zope-formulator.
I can confirm that I also have a similar problem with export / import of
zope-formulator objects so there really seems to be a problem.

I have the impression that zope formulator is not very actively maintained
any more (other people just droped the package form the Debian distribution
until I just grabbed it up again).  It would be nice if you would keep us
informed about the development status.  The last message I see on the
developer list from you is

  https://lists.infrae.com/pipermail/formulator-dev/2006-February/000142.html

which is quite some time ago.  Is there any solution for the problem
which is reported below in SVN?  Do you see a chance to fix this
problem?

Kind regards and thanks for your work on Zope Formulator

 Andreas.

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-- Forwarded message --
Date: Wed, 21 Jan 2009 08:10:23 +
From: Filippo Paglia scontu...@infinito.it
To: Debian Bug Tracking System sub...@bugs.debian.org
Subject: Bug#512490: zope2.10: Problems with zope-formulator with this version
of zope
Resent-Date: Wed, 21 Jan 2009 08:18:02 +
Resent-Date: Wed, 21 Jan 2009 08:18:04 +
Resent-From: Filippo Paglia scontu...@infinito.it
Resent-To: debian-bugs-dist@lists.debian.org
Resent-cc: Debian/Ubuntu Zope Team pkg-zope-develop...@lists.alioth.debian.org

Package: zope2.10
Version: 2.10.6-1
Severity: normal


I have installed the product Formulator (1.11.3)
After the creation of a Formulator Form in a folder
 and only after the creation of a new field in this form (ex. StringField),
 I can't copy/move this form in any parts of zope;
 also I can't use the function of import of .zexp files
 that contain this type of object.

When I try to copy the formulator form, Zope answers with this message:

Error Type: AttributeError
Error Value: field_added

Traceback (innermost last):
- Module ZPublisher.Publish,line 119,in publish
- Module ZPublisher.mapply,line 88,in mapply
- Module ZPublisher.Publish,line 42,in call_object
- Module OFS.CopySupport,line 224,in manage_pasteObjects
- Module OFS.ObjectManager,line 347,in _setObject
- Module zope.event.line 23,in notify
- Module zope.component.event,line 26,in dispatch
- Module zope.component._api,line 130,in subscribers
- Module zope.component.registry,line 290,in subscribers
- Module zope.interface.adapter,line 535,in subscribers
- Module zope,component.event,line 33,in objectEventNotify
- Module zope.component._api,line 130,in subscribers
- Module zope.component.registry,line 290,in subscribers
- Module zope.interface.adapter,line 535,in subscribers
- Module OFS.subscribers,line 119,in dispatchObjectMovedEvent
- Module zope.app.container.contained,line 182,in dispatchToSublocations
- Module zope.component._api.line 130,in subscribers
- Module zope.component.registry,line 290,in subscribers
- Module zope.interface.adapter,line 535,in subscribers
- Module Products.Formulator.Field,line 579,in field_added

Note
I've modified the file zope.conf with this values:
- datetime-format international
- default-zpublisher-encoding utf-8

I hope to have insert the bug in the right place
(I thing that this is a problem of zope and not of formulator)
Thanks

-- System Information: Debian Release: 5.0
  APT prefers testing
  APT policy: (500, 'testing')
Architecture: i386 (i686)

Kernel: Linux 2.6.26-1-xen-686 (SMP w/1 CPU core)
Locale: LANG=it_IT.UTF-8, LC_CTYPE=it_IT.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash

Versions of packages zope2.10 depends on:
ii  debconf [debconf-2.0] 1.5.24 Debian configuration management sy
ii  libc6 2.7-18 GNU C Library: Shared libraries
ii  lsb-base  3.2-20 Linux Standard Base 3.2 init scrip
ii  python-tz 2008c-2Python version of the Olson timezo
ii  python2.4 2.4.6-1An interactive high-level object-o
ii  zope-common   0.5.45 common settings and scripts for Zo

zope2.10 recommends no packages.

Versions of packages zope2.10 suggests:
pn  python-unit   none (no description available)
pn  zope-book none (no description available)
pn  zope-devguide none (no description available)

-- no debconf information



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Bug#510251: postgresql-8.3-plr: does not build against R 2.8

2009-01-23 Thread Andreas Tille

On Tue, 30 Dec 2008, Faheem Mitha wrote:


I have never used plr, but tried building it against 2.8 (CRAN version
2.8.1-1~etchcran.0) right now in an etch vserver, and it failed.
Should I report it to the plr mailing list?


No.  I can reproduce this problem which is caused by the fact that
the r-base-core package is lacking /usr/share/R/includes/Rdevices.h .
I will reassign the bug report to this package.


Thanks for getting this back into Debian - at first I thought I would
have to build it myself...


You can work around this problem for your local installation by just
copying src/include/Rdevices.h into the plr source directory.  The
you can build the package for the moment.


make[1]: Entering directory /usr/local/src/plr/plr-8.3.0.6'
sed 's,MODULE_PATHNAME,$libdir/plr,g' plr.sql.in plr.sql
cc -g -Wall -O2 -fpic -I. -I/usr/lib/R/include
-I/usr/share/R/include -I. -I/usr/include/postgresql/8.3/server
-I/usr/include/postgresql/internal
-DPKGLIBDIR=\/usr/lib/postgresql/8.3/lib\ -DDLSUFFIX=\.so\
-DR_HOME_DEFAULT=\/usr/lib/R\  -c -o plr.o plr.c
In file included from plr.c:33:
plr.h:61:22: error: Rdevices.h: No such file or directory


-- here you can see the problem.

BTW, if you detect a bug which prevents to build a package from source
it is definitely higher than wishlist.  In most cases it is an RC
critical bug.  If you are unsure you can set it at least to normal.

If I reassign the package to r-base-core it is not RC for this package
but at least important because of the problem it causes for plr.

Kind regards and thanks for your bug report

  Andreas.

PS: Sorry for the late reply - normally I'm a bit faster ...

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Bug#510251: r-base-core is lacking /usr/share/R/includes/Rdevices.h

2009-01-23 Thread Andreas Tille

On Fri, 23 Jan 2009, Andreas Tille wrote:


You can work around this problem for your local installation by just
copying src/include/Rdevices.h into the plr source directory.  The
you can build the package for the moment.


I have to revert this.  I learned that Rgraphics.h is lacking as well
and once you include these both in the plr source tree and try to
build against R 2.8 you get something like:

cc -g -O2 -g -Wall -O2 -fpic -I. -I/usr/share/R/include 
-I/usr/share/R/include -I. -I/usr/include/post
gresql/8.3/server -I/usr/include/postgresql/internal  
-DPKGLIBDIR=\/usr/lib/postgresql/8.3/lib\ -DDLSUFF
IX=\.so\ -DR_HOME_DEFAULT=\/usr/lib/R\  -c -o plr.o plr.c
In file included from Rdevices.h:36,
 from plr.h:61,
 from plr.c:33:
./Rgraphics.h:124: warning: parameter names (without types) in function 
declaration
./Rgraphics.h:126: warning: parameter names (without types) in function 
declaration
./Rgraphics.h:128: warning: parameter names (without types) in function 
declaration
./Rgraphics.h:140: warning: parameter names (without types) in function 
declaration
./Rgraphics.h:143: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:163: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:166: warning: parameter names (without types) in function 
declaration
./Rgraphics.h:169: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:171: warning: parameter names (without types) in function 
declaration
./Rgraphics.h:173: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:175: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:178: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:181: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:183: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:185: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:187: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:189: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:191: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:195: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:198: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:199: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:213: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:216: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:222: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:224: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:227: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:228: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:243: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:244: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:245: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:247: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:248: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:255: warning: parameter names (without types) in function 
declaration
./Rgraphics.h:258: warning: parameter names (without types) in function 
declaration
./Rgraphics.h:261: error: expected '=', ',', ';', 'asm' or '__attribute__' 
before 'Rf_GNewPlot'
./Rgraphics.h:263: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:265: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:267: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:270: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:271: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:272: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:273: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:274: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:275: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:276: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:277: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:278: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
./Rgraphics.h:279: error: expected declaration specifiers or '...' before 
'pGEDevDesc'
make[1

Bug#510251: r-base-core is lacking /usr/share/R/includes/Rdevices.h

2009-01-23 Thread Andreas Tille

On Fri, 23 Jan 2009, Dirk Eddelbuettel wrote:


First off, thanks for maintaining pl-r. I wasn't aware that it has landed in
your lap. I was aware that the Pg maintainers didn't really want it (for lack
of R expertise) but I had no spare capacity to take it on myself.


Well, I used this package on a machine running testing and I noticed by
chance that it was dropped.  I tried to convince RM to reinclude it into
Lenny (even bothered them in person at DebConf) but I was not lucky with
this attempt.  So we will not be able to provide a straight upgrade path
from Etch to Lenny - especially if our package in unstable might relay
on new R 2.8 features and might get problems with backporting to 2.7.
I have no idea whether this might be one consequence of the issue we are
discussing here - but at least this might be possible.


|  You can work around this problem for your local installation by just
|  copying src/include/Rdevices.h into the plr source directory.  The
|  you can build the package for the moment.
|
| I have to revert this.

Yes, that was plain wrong.  R (upstream) changed their interface and
tightened this. It also affected things I maintain such as the RPy package.

So the error is plainly with the client package. It is not an R issue
inasmuch as that these interface were never public (yet pl/R is a well-known
example even used in the 'R Extensions' manual about embedding).


OK, thanks for the clarification.


| I learned that Rgraphics.h is lacking as well
| and once you include these both in the plr source tree and try to
| build against R 2.8 you get something like:

Did you talk Joe Conway about this?  Joe as upstream author has always been
very responsive clueful when I contacted him about pl/R (which I had played
with over the years).


I've ssen that Joe is in CC and no, I did not yet talked to him because
I just made wrong assumptions (about missing include files).  Since you
now clarified this issue I guess Joe will find a reasonable response.


Now the final question for Faheem: Pl/R has existed in Debian for years. Why
did you think you needed to rebuild it for etch?  Were you lacking a
particular combination of versions of R and/or Pg on etch ?


We might perhaps a package which works with Lenny Build-Depends.


I'm sure we can sort all this out.


If Joe helps us I'm really optimistic.

Kind regards

   Andreas.

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Bug#510251: r-base-core is lacking /usr/share/R/includes/Rdevices.h

2009-01-23 Thread Andreas Tille

On Fri, 23 Jan 2009, Joe Conway wrote:

I won't have time to digest this until the weekend, but I'll try to get back 
to you by Monday.


That's perfectly all right.

Have a nice weekend

  Andreas.

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Bug#512891: plr - FTBFS: error: Rdevices.h: No such file or directory

2009-01-24 Thread Andreas Tille

On Sat, 24 Jan 2009, Bastian Blank wrote:


Package: plr
Version: 1:8.3.0.6-2
Severity: serious

There was an error while trying to autobuild your package:


Automatic build of plr_1:8.3.0.6-2 on lxdebian.bfinv.de by sbuild/s390 98

...


This is a known problem (#510251) which was discussed yesterday and
reported upstream.

Thanks for autobuilding the archive anyway

   Andreas.





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Bug#512930: ITP: jmol -- java molecular graphics system

2009-01-24 Thread Andreas Tille

On Sun, 25 Jan 2009, Vincent Fourmond wrote:


Package: wnpp
Severity: wishlist
Owner: Vincent Fourmond fourm...@debian.org

* Package name: jmol
 Version : 11.6
 Upstream Author : Jmol team
* URL : http://jmol.sourceforge.net/
* License : LGPL
 Programming Lang: Java, Javascript
 Description : java molecular graphics system
Jmol is a molecular graphics system like Pymol written entirely in Java.
It can be easily embedded into other applications, such as jalview.

This is packaged so it can be used from within jalview.


Thanks for your ITP.  If you say: This *is* packaged could
you please send any URL?  There is a former attempt to package
Jmol in our SVN:

http://svn.debian.org/wsvn/pkg-escience/jmol/trunk/debian/?rev=0sc=0

but this concerns a previous version.  Do you have your work
anywere publicly available?

Kind regards

  Andreas.

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Bug#515943: debian-science: Broken Vcs-* URLs in debian/control

2009-02-18 Thread Andreas Tille

On Wed, 18 Feb 2009, Rafael Laboissiere wrote:


Subject says all.  Both URLs below are broken:

Vcs-Browser: 
http://svn.debian.org/wsvn/cdd/projects/science/trunk/debian-science/?rev=0sc=0
Vcs-Svn: svn://svn.debian.org/cdd/projects/science/trunk/debian-science/


It is just fixed in the upload to experimental.  The debian-science
has a number of extra metapackages which delays processing and also
depends from blends-dev which is also only in experimental to enable
fixing things in cdd-dev in unstable while Lenny was not yet released.
So things will be fixed in the near future automatically (once
ftpmaster has edited override).

Kind regards

Andreas.

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Bug#515947: science-mathematics-dev: Depends on non -dev library packages

2009-02-18 Thread Andreas Tille

On Wed, 18 Feb 2009, Rafael Laboissiere wrote:


Making this package depend on other libraries is both non-sensical and
useless.  I suggest to change the following dependencies:

libglpk0 - libglpk-dev
libsuperlu3 - libsuperlu3-dev
libslepc2.3.2 - libslepc2.3.2-dev
libmesh0.6.1 - libmesh0.6.2-dev

Note that libmesh0.6.1 does not even exist in Debian.


Good catch.  I changed this in SVN.  I might add that my long term plan
is to enable to detect blends-dev package to detect the version
number automatically.  But this is a _long_ _term_ plan.

Kind regards

Andreas.

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Bug#370822: xteddy: Please switch to newer version of imlib

2009-02-18 Thread Andreas Tille

On Wed, 18 Feb 2009, Moritz Muehlenhoff wrote:


imlib11 is scheduled for removal and since the eventual replacement
through cteddy isn't related, please request removal from the
archive.


Do you mean *now* is there any reason to keep it in unstable for
a while?  The rationale is that xteddy is not only a cute toy
but can be used in some presentation to pop up some transparent
images which is sometimes really helpful.  If it only would be
a toy I would immediately do so, but keeping it in unstable
as long as there is no replacement seems to be fair.  As an
exchange I'll ask for removal of libgtkimreg0 and paul which
have the same imlib problem.  Is this a fair deal? ;-)

Kind regards

Andreas.

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Bug#515943: debian-science: Broken Vcs-* URLs in debian/control

2009-02-18 Thread Andreas Tille

On Wed, 18 Feb 2009, Rafael Laboissiere wrote:


Subject says all.  Both URLs below are broken:

Vcs-Browser: 
http://svn.debian.org/wsvn/cdd/projects/science/trunk/debian-science/?rev=0sc=0
Vcs-Svn: svn://svn.debian.org/cdd/projects/science/trunk/debian-science/


It is just fixed in the upload to experimental.


Okay, I have not noticed that 0.4 was in the NEW queue.

Could you please tell me the current SVN URL?


Well cdd was renamed to blends.  Perhaps you might like
to check out

 http://svn.debian.org/wsvn/blends/projects/

Kind regards and thanks for your interest

   Andreas.

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Bug#516011: RM: libgtkimreg -- ROM; It is using imlib1 which will be removed from the archive soon.

2009-02-18 Thread Andreas Tille
Package: ftp.debian.org
Severity: normal

libgtkimreg0 is using imlib1 which should be removed
from the archive.  The library is used by paul which
also is subject of removal (#456131).

Kind regards and thanks for maintaining ftp.debian.org

   Andreas.

-- System Information:
Debian Release: 5.0
  APT prefers testing
  APT policy: (501, 'testing'), (50, 'unstable'), (5, 'experimental')
Architecture: i386 (i686)

Kernel: Linux 2.6.26-1-686 (SMP w/1 CPU core)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash



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Bug#370822: xteddy: Please switch to newer version of imlib

2009-02-18 Thread Andreas Tille

On Wed, 18 Feb 2009, Barry deFreese wrote:


Haven't we already patched xteddy to use Imlib2?


The bug log says:

--
From: Barry deFreese bdefre...@debian.org
To: 370...@bugs.debian.org
Subject: Start of patch for imlib2
Date: Wed, 10 Dec 2008 13:08:26 -0500

Hi,

Here is a patch I started.  It does build but segfaults and I'm probably 
a bit over my head.  Hope this helps at least a little.


--

If it segfaults the problem is not really solved and I understood
your remark a bit over my head as a I have to give up on this.
Sorry if I missinterpreted this.

I was also working on a patch for libgtkimreg but it may or may not be broken 
(As well as not being completed)...


I would really welcome if you would succeed with this tasks but
even as the upstream author I would say that there are probably
other more frequently used packages which deserve an imlib1 to
imlib2 upgrade more than libgtkimreg.  If there is any hope that
you will be successful I might redraw my request for removal (or
reintroduce it later again).

Many thanks for your effort to upgrade this old code!

Kind regards

Andreas.

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Bug#516037: gnumed-client: hard-codes the location to python modules

2009-02-18 Thread Andreas Tille

On Thu, 19 Feb 2009, Josselin Mouette wrote:


the gnumed-client package uses a hard-coded path to the python modules:
   GNUMEDDIR=/var/lib/python-support/python${PYVER}/Gnumed/wxpython

However, because of numerous requests from developers, the installation
path for these modules is going to change, so this will make
gnumed-client fail.

If you really want to keep hard-coding this path, it is possible to
handle this with a synchronized upload and a Breaks:, but I’d like to
avoid it if possible.


I would like to follow your advise to not hardcode tha path.


Instead, I’d like to suggest alternate solutions
that are independent from the packaging layers:
 * Detect the modules location dynamically from the script. You can
   see an example in the pychecker package.
 * Make /usr/bin/gnumed a python script, rewriting the environment
   manipulations in python; this makes the import trivial.


What means trivial.  Is there an alternative example like pychecker
for the first option?


 * Move part or all of the files to a private modules directory.


If you ask me this sounds like the most reasonable suggestion.  But
how does it work together with python-support?  Any docs how the behaviour
of python-support will change?  (I haven't followed the debian-python
discussion very closely.)

Kind regards

   Andreas.

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Bug#516037: gnumed-client: hard-codes the location to python modules

2009-02-18 Thread Andreas Tille

On Thu, 19 Feb 2009, Karsten Hilbert wrote:


  * Move part or all of the files to a private modules directory.

Hopefully we can find another way.


IMHO this is the less invasive option and might keep the modules at
the place where you put them upstream - at least if I understood the
suggestion right.

Kind regards

Andreas.

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Bug#370822: xteddy: Please switch to newer version of imlib

2009-02-18 Thread Andreas Tille

On Wed, 18 Feb 2009, Barry deFreese wrote:

Sorry, Peter DeWachter fixed up my patch and it should be working.  Probably 
needs some more testing?  His patch is posted on this bug as well.


Ahh, great - I'll test it soon.

Kind regards

 Andreas.

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Bug#516037: gnumed-client: hard-codes the location to python modules

2009-02-19 Thread Andreas Tille

On Thu, 19 Feb 2009, Karsten Hilbert wrote:


The trivial seems to come about by the misbelief that our
module imports somehow use GNUMEDDIR which they do not.
That's only used to access gnumed.py, nothing else.

gnumed(.sh) is there exactly to *be* a shell wrapper around
gnumed.py to allow the user to run additional shell scripts
before launching GNUmed. It doesn't make any sense to
convert it to Python.


So the fix for the bug is really simple: Install the Python
modules at *any* place which the Pathon policy suggests and
adapt the shell script to this place, right?

Kind regards

 Andreas.

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Bug#516037: [Debian-med-packaging] Bug#516037: gnumed-client: hard-codes the location to python module

2009-02-19 Thread Andreas Tille

On Thu, 19 Feb 2009, Josselin Mouette wrote:


Looking more closely, there is an even simpler way than that of
pychecker. Something like this should directly work:
   python -m Gnumed.wxpython.gnumed


I'll think about this.


I don’t have one handy, but the idea is to consider it a regular script.

Looking more closely at gnumed.py, it occurs to me that it is not even
meant to be in a modules directory:
   if __name__ != __main__:
   print GNUmed startup: This is not intended to be imported as a 
module


Actually yes, this is true.  It was just amongst the other python files
and I wanted to write a wrapper script for different configurations
inside Debian anyway.  So I left it where it was and thought it might
not harm to have it compiled into byte code.


This way, instead of a wrapper script, you could directly put this
script in /usr/bin, adding to it the necessary logic to read the
configuration.


As I said - it can be started (ar at least there were times when we
started it with differend wrappers which used different configurations).
The reasons for doing so might have become void these days - I'll
keep on thinking about this.


This is very simple, just ship the modules to /usr/share/gnumed-client,
and modify your script to do something like:
   import sys
   sys.path.append(/usr/share/gnumed-client)
   import Gnumed.whatyouwant
   …

Python-support will handle this automatically; you just have to pass the
installation directory to the dh_pysupport call if it is non-standard.


Ahh, that sounds good!


Thanks for your quick answer,


Same to you. ;-)

Kind regards

  Andreas.

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Bug#514690: Regarding RFS: Artha

2009-02-19 Thread Andreas Tille

On Thu, 19 Feb 2009, Sundaram wrote:


I was wondering if you have uploaded the package to the Debian repository. I 
apologize
if I sound demanding or pestering here :)


No pestering me is the right way to go.  My plan is to do this either
at the weekend or at least next monday.  Just try perstering again
to remind me in case this task might silently go down on my todo
list without notice.


I am just curious, how will I know if the upload of the package is done or if 
the
check-in of the control files into the Debian Science SVN is done?


My plan is to check in first to enable putting the right Vcs fields
into the control file.  I assume you are OK with the cdbs usage?

Thanks for the remainder - it is perfectly welcome on my side

  Andreas.

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Bug#514690: Regarding RFS: Artha

2009-02-19 Thread Andreas Tille

On Thu, 19 Feb 2009, Sundaram wrote:


Wow! Never knew you would recommend pestering :0


SUre - but I have only the right to advise this for one
single person (=me).  I would not recommend to try this to
others. ;-)


I am perfectly fine by the usage of cdbs, as you told earlier that its 
convenient for
you to keep track.
Well I will remind (pester) you again tomorrow night, as a precursor to the 
weekend's
:)


Before you pester again:

   
http://svn.debian.org/wsvn/debian-science/packages/artha/trunk/debian/?rev=0sc=0

;-)

I also try to do the upload tomorrow ...

Kind regards

Andreas.

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Bug#514690: Regarding RFS: Artha

2009-02-20 Thread Andreas Tille

On Fri, 20 Feb 2009, Sundaram wrote:


 I would not recommend to try this to others. ;-)
Point taken. Gee! That (checking in) was fast for a single dosage of pestering 
;)


That's why I recommended pestering - because it is normally helpful
(in my case). ;-)


Thanks for checking in the control files. I have received a mail telling that 
the ITP bug is now
tagged 'pending'. Also a mail on artha_0.8.0-1_i386 which says

(new) artha_0.8.0-1.diff.gz optional utils
(new) artha_0.8.0-1.dsc optional utils
(new) artha_0.8.0-1_i386.deb optional utils

and in the end Your package contains new components which requires manual 
editing of the override
file.  It is ok otherwise, so please be patient.  New packages are usually 
added to the override file
about once a week. You may have gotten the distribution wrong.  You'll get 
warnings above if files
already exist in other distributions.

So what does these mean?


This means I did not only commited to SVN but also uploaded
the package:

   http://ftp-master.debian.org/new/artha_0.8.0-1.html

It's just waiting for ftpmaster aproval (as several other packages
which enter the Debian pool the first time).


What file is it talking about? Also, if I had received one for i386, why
didn't I receive one for amd64?


The other architectures will be autobuilded later once the package
is accepted by ftpmaster.  That's perfectly normal.  You get the mail
only once for the architecture the package was builded.  If I would
have done it on mips or powerpc or whatever you whould have got this
in the notification.


I am confused :-|


There is no need to be confused.  Everything is perfectly normal (as
far as I can tell).


I wanted to understand the underlying process.


If something remains unclear just RTFM. ;-))

Kind regards and thanks for providing this nice WordNet interface

  Andreas.

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Bug#516037: gnumed-client: hard-codes the location to python module

2009-02-20 Thread Andreas Tille

On Fri, 20 Feb 2009, Karsten Hilbert wrote:


The attached script would be my suggestion. If that looks OK
I will commit it to the upstream CVS.


Looks perfectly reasonable to me.  Do you want me to fix this
problem now by uploading just another 0.3.10 based Debian package
or do you think it makes sense to wait for the upcoming 0.4.
IMHO there is no need to hurry because there is no problem with
the *currently* existing packages in unstable.

Kind regards

 Andreas.

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http://fam-tille.de#!/bin/bash

#==
# This shell script is intended to be placed in
# /usr/bin/ and should be run to start a GNUmed
# client.
#
# $Source: /sources/gnumed/gnumed/gnumed/dists/Linux/gnumed,v $
# $Id: gnumed,v 1.21 2009/02/20 10:45:44 ncq Exp $
# license: GPL
# Karsten Hilbert, Sebastian Hilbert, Andreas Tille
#--

# for debugging this script
# set -x

OPTIONS=$@


# The system-wide configuration file for backend profiles.
SYSCONF=/etc/gnumed/gnumed-client.conf
if [ ! -e ${SYSCONF} ] ; then
echo Global config file ${SYSCONF} missing.
exit 1
fi


# source systemwide startup extension shell script if it exists
if [ -r /etc/gnumed/gnumed-startup-local.sh ] ; then
. /etc/gnumed/gnumed-startup-local.sh
fi


# source local startup extension shell script if it exists
if [ -r ${HOME}/.gnumed/scripts/gnumed-startup-local.sh ] ; then
. ${HOME}/.gnumed/scripts/gnumed-startup-local.sh
fi


# now run the client
python -m Gnumed.wxpython.gnumed ${OPTIONS}

# sync the discs just in case
sync


Bug#516545: ITP: eprover -- The Equational Theorem Prover E

2009-02-22 Thread Andreas Tille

Hi,

this seems like a nce target for Debian Science Mathematics
section.  Petr, do you consider putting the package under
Debian Science team maintenance?

Kind regards

  Andreas.

On Sun, 22 Feb 2009, Petr Pudlak wrote:


Package: wnpp
Severity: wishlist
Owner: Petr Pudlak d...@pudlak.name


* Package name: eprover
 Version : 1.0.004
 Upstream Author : Stephan Schulz sch...@eprover.org
* URL : http://www.eprover.org/
* License : GPL-2
 Programming Lang: C
 Description : The Equational Theorem Prover E

E is an automated equational theorem prover. That means it is a program that
you can stuff a mathematical specification (in first-order logic with equality)
and a hypothesis into, and which will then run forever, using up all of your
machines resources. Very occasionally it will find a proof for the hypothesis
and tell you so ;-).

Release 1.0 is the culmination of a long development phase. Important changes
vs. version 0.999 include the fixing of some bugs in definitional
clausification for large problems and general cleanup.

(Copied from the original documentation.)


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Bug#516545: ITP: eprover -- The Equational Theorem Prover E

2009-02-22 Thread Andreas Tille

On Sun, 22 Feb 2009, Petr Pudlak (Debian) wrote:


yes, I thought that it would be a good idea, but I couldn't find exact 
guidelines how
to do it. (Maybe it's just because I'm a bit tired after spending the whole 
weekend
reading Debian documentation.)

I can package eprover according to
http://debian-science.alioth.debian.org/debian-science-policy.html


This describes basically the recommendations inside the team.  BTW,
if you have some comments about this policy you are invited to pronounce
these openly on the debian-science mailing list.  It is always good to
get some response whether these guidlines are useful or not.


this is no problem, but I'm not sure what to do next. Just look for a sponsor at
http://wiki.debian.org/DebianScience/Sponsoring? Or request membership in Debian
Science at Alioth?


Yes.  This is needed to commit your packaging stuff into the Debian Science
Vcs (either SVN or Git at your choice).  I would also recommend to subscribe
the debian-science mailing list.  Asking there for sponsoring increases your
chances to find a sponsor.  (This is a personal remark and might be wrong:
*I* personally do not watch the Wiki page - so I can not comment on the
success you might have to use the Wiki.)


Thanks for your help.


You are welcome

   Andreas.
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Bug#516627: ITP: fudgit -- A double-precision multi-purpose fitting program

2009-02-22 Thread Andreas Tille

Hi Jan,

this might be an interesting add on for Debian Science Viewing task.
Would you consider group maintenance in the Debian Science team?

Kind regards

 Andreas.

On Sun, 22 Feb 2009, Jan Hendrik den Besten wrote:


Package: wnpp
Severity: wishlist
Owner: Jan Hendrik den Besten bes...@janhendrik.eu


* Package name: fudgit
 Version : 2.43-gudjon
 Upstream Author : Jan Hendrik den Besten bes...@janhendrik.eu
* URL : http://www.bbphotonics.eu/fudgit
* License : GPL
 Programming Lang: C
 Description : A double-precision multi-purpose fitting program

FUDGIT is a double-precision multi-purpose fitting program. It can
manipulate complete columns of numbers in the form of vector arithmetic.
FUDGIT is also an expression language interpreter understanding most of C
grammar except pointers. Morever, FUDGIT is a front end for any plotting
program supporting commands from stdin. It is a nice mathematical
complement to GNUPLOT, for example.


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Bug#516627: ITP: fudgit -- A double-precision multi-purpose fitting program

2009-02-22 Thread Andreas Tille

On Sun, 22 Feb 2009, Jan Hendrik den Besten wrote:


Fudgit would be my first package to maintain. I feel I must gain some
experience in that first - before I take up other tasks.


Well, nobody is forcing you to join a team - you are perfectly free
to do so.  But I feel some inconsitency in your reasoning: You do not
want the help of a team because you are not experienced?  Especially
in this case I would recommend reading

   http://debian-science.alioth.debian.org/debian-science-policy.html

because it gives some reasonable framework and if it comes to seeking
a sponsor you are welcome to ask on debian-scie...@lists.debian.org.

Joining the Debian Science team means getting help in packaging scientific
software not adding another task to your shoulders. ;-)

Kind regards

   Andreas.

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Bug#516704: devscripts: uscan should parse not only directory with highes version number

2009-02-23 Thread Andreas Tille
Package: devscripts
Version: 2.10.35lenny2
Severity: wishlist


Hi,

DEHS is reporting new versions of GNUmed with the current watch file
which says:

  http://www.gnumed.de/downloads/client/([\d\.]+)/GNUmed-client\.(.*)\.tgz

These new versions are only release candidates (0.4-rc\d) which should
not be packaged (as I agreed with upstream).  So I might live with these
false alarms for the next couple of weeks but I would like to fix the
watch file properly.  So I tried:

  http://www.gnumed.de/downloads/client/([\d\.]+)/GNUmed-client\.([\d\.]+)\.tgz

but this does not even detects the recent version (0.3.10).  My guess is
that uscan is at first seeking for the directory with the highest version
(  http://www.gnumed.de/downloads/client/0.4  ) and then parses for the
tarball which matches GNUmed-client\.([\d\.]+)\.tgz - but there is no such
file (these are only in (  http://www.gnumed.de/downloads/client/0.3  ).

As you can read in the thread starting at
  http://lists.debian.org/debian-qa/2009/02/msg00105.html
I discussed this problem on debian-qa and Paul Wise actually found a
workyround for this problem but we agreed that it would be a nice feature
of uscan to parse lower verisoned directories of the scan of the latest
might have failed.

Kind regards and thanks for maintaining uscan

  Andreas.

-- Package-specific info:

--- /etc/devscripts.conf ---
DEBUILD_LINDA=no
DEBUILD_LINTIAN_OPTS=--info --display-info
DEBUILD_LINDA_OPTS=-info

--- ~/.devscripts ---
Not present

-- System Information:
Debian Release: 5.0
  APT prefers testing
  APT policy: (501, 'testing'), (50, 'unstable'), (5, 'experimental')
Architecture: i386 (i686)

Kernel: Linux 2.6.26-1-686 (SMP w/1 CPU core)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash

Versions of packages devscripts depends on:
ii  dpkg-dev  1.14.25Debian package development tools
ii  libc6 2.7-18 GNU C Library: Shared libraries
ii  perl  5.10.0-19  Larry Wall's Practical Extraction 

Versions of packages devscripts recommends:
ii  at 3.1.10.2  Delayed job execution and batch pr
ii  bsd-mailx [mailx]  8.1.2-0.20071201cvs-3 A simple mail user agent
ii  curl   7.18.2-8  Get a file from an HTTP, HTTPS or 
ii  cvs1:1.12.13-12  Concurrent Versions System
ii  dctrl-tools2.13.1Command-line tools to process Debi
ii  debian-keyring 2009.01.18GnuPG (and obsolete PGP) keys of D
ii  debian-maintainers 1.52  GPG keys of Debian maintainers
ii  dput   0.9.2.32  Debian package upload tool
ii  elinks [www-browse 0.11.4-3  advanced text-mode WWW browser
ii  epiphany-gecko [ww 2.22.3-9  Intuitive GNOME web browser - Geck
ii  equivs 2.0.7-0.1 Circumvent Debian package dependen
ii  fakeroot   1.11  Gives a fake root environment
ii  galeon [www-browse 2.0.6-2.1 GNOME web browser for advanced use
ii  git-core   1:1.5.6.5-2   fast, scalable, distributed revisi
ii  gnupg  1.4.9-3   GNU privacy guard - a free PGP rep
ii  iceape-browser [ww 1.1.14-1  Iceape Navigator (Internet browser
ii  iceweasel [www-bro 3.0.6-1   lightweight web browser based on M
ii  konqueror [www-bro 4:3.5.9.dfsg.1-6  KDE's advanced file manager, web b
ii  libauthen-sasl-per 2.12-1Authen::SASL - SASL Authentication
ii  libcrypt-ssleay-pe 0.57-1+b1 Support for https protocol in LWP
ii  libparse-debcontro 2.005-2   Easy OO parsing of Debian control-
ii  libsoap-lite-perl  0.710.08-1Client and server side SOAP implem
ii  libterm-size-perl  0.2-4+b1  Perl extension for retrieving term
ii  libtimedate-perl   1.1600-9  Time and date functions for Perl
ii  liburi-perl1.35.dfsg.1-1 Manipulates and accesses URI strin
ii  libwww-perl5.813-1   WWW client/server library for Perl
ii  libyaml-syck-perl  1.05-1Fast, lightweight YAML loader and 
ii  links [www-browser 2.1pre37-1.1  Web browser running in text mode
ii  lintian1.24.2.1  Debian package checker
ii  lsb-release3.2-20Linux Standard Base version report
ii  lynx-cur [www-brow 2.8.7dev9-2.1 Text-mode WWW Browser with NLS sup
ii  mailx  1:20071201-3  Transitional package for mailx ren
ii  man-db 2.5.2-4   on-line manual pager
ii  openssh-client [ss 1:5.1p1-5 secure shell client, an rlogin/rsh
ii  patch  2.5.9-5   Apply a diff file to an original
ii  patchutils 0.2.31-4  Utilities to work with patches
ii  strace 4.5.17+cvs080723-2A system call 

Bug#516704: devscripts: uscan should parse not only directory with highes version number

2009-02-23 Thread Andreas Tille

On Mon, 23 Feb 2009, Adam D. Barratt wrote:


I believe this boils down to basically the same request as #375138,
which has been marked wontfix for a couple of years.


I admit this seems to be the same problem - sorry fo not verifying
BTS properly.


I haven't merged
them yet as I'm undecided as to whether I agree with the original
wontfix - opinions welcome, particularly from other devscripts
maintainers.


Well, once I brought this topic up again I would like to trigger
a new discussion - IMHO the feature to go down the directory tree
until a matching file is found makes sense to me.

Kind regards

Andreas.

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Bug#516545: ITP: eprover -- The Equational Theorem Prover E

2009-02-24 Thread Andreas Tille

On Mon, 23 Feb 2009, Petr Pudlak (Debian) wrote:


as I was suggested, I'm looking for a sponsor for the eprover package,
who would help me with publishing the package.


If you are seeking for a sponsor it is a clever idea to post the
URL to your *.dsc file to enable others to evaluate your work. ;-)


I believe that Debian Science would be a proper place for it.


Did you asked for an alioth account which might be added to
debian-science team.  Once this is done you are able to commit
to SVN or Git - posting this location would be an alternative
to the URL of the *.dsc file.

Kind regards and thanks for your work on eprover

   Andreas.

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Bug#516875: ITP: libxfce4menu -- freedesktop.org compliant menu implementation for Xfce

2009-02-24 Thread Andreas Tille

On Tue, 24 Feb 2009, Yves-Alexis Perez wrote:


* Package name: libxfce4menu
 Version : 4.6.0
 Upstream Author :  Jannis Pohlmann jan...@xfce.org
* URL : http://www.xfce.org.org/
* License : GPL-2+
 Programming Lang: C
 Description : freedesktop.org compliant menu implementation for Xfce

libxfce4menu is an XDG-compliant menu implementation for Xfce Desktop
Environment.


Could you please be a little bit more verbose.  I had the (maybe wrong)
assumption that xfce4 would be XDG-compliant without any additional
packages.  Or is it just that xfce4 4.6.0 is more modulized?  If this
is the case I would mention this in the long description to avoid confusion.

Kind regards

  Andreas.

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Bug#517010: [Debian-med-packaging] Bug#517010: Bug#517010: [njplot] Please mention that njplot is a phylogenetic tree drawing program in the short description

2009-02-24 Thread Andreas Tille

On Wed, 25 Feb 2009, Charles Plessy wrote:


tag 517010 pending
thanks


Thanks. ;-)


thanks for the suggestion. I corrected the description in our Subversion
repository, and the change will be part of the next upload (maybe not so soon…).


Any specific reason to wait with an upload.  IMHO it makes sense to fix 
description
issues in a shorter time frame.  This would influence our tasks pages and gives
description translators more time.

Kind regards

 Andreas.

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Bug#517010: [Debian-med-packaging] Bug#517010: Bug#517010: Bug#517010: [njplot] Please mention that njplot is a phylogenetic tree drawing program in the short description

2009-02-25 Thread Andreas Tille

On Wed, 25 Feb 2009, Charles Plessy wrote:


Yes, the end of the coffee break :)


;-)


Do not hesitate to upload if you are currently examining njplot. I can do it
later, but I already shifted my attention to other packages.


OK.  I'm probably busy + offline until sunday evening.  If nothing happened
until then I'll take action.  You sounded in your response like the upload
would be delayed for weeks or so ...

Kind regards

Andreas.

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Bug#516545: ITP: eprover -- The Equational Theorem Prover E

2009-02-25 Thread Andreas Tille

On Wed, 25 Feb 2009, Petr Pudlak (Debian) wrote:


dget -u http://petr.pudlak.name/deb/eprover_1.0.004-1.dsc


I had a short look onto your work and would like to give some
comments.  At first you obviousely did a good job to create a
lintian clean package of a complex software!  Considering that
you even provided man pages for binaries in /usr/bin shows
that you made some effort.  Especially if it is your first
package that's very good.

Some (nitpicking!!) idea: Have you considered to move the
examples into a separate package.  These are not really of
a size which should be separated I just want to know whether
you know about the option to separate architeture independant
files into a separate package exspecially of the package might
work without these files.  If you confirm that you know this
option but decided against it intentionally because the examples
are a very impornat part of the package it is perfectly fine
for me.

Regarding team maintenance: I've seen that you have patched
several files and did not used a patch system (like quilt or
dpatch).  Doing so seems to make Git the better choice for
a Version Control System because we have the policy to not
commit the upstream source to SVN and use patches instead.
The Git workflow (which I'm not very comfortable with) seems
to relay on commiting the whole source and patch the files
accordingly.  So the question is: Have you made up your mind
about commiting eprover to the Debian Science reporitory?
While this is not required to find a sponsor I would like
to recommend this once more.  In this case you should add
Vcs-Git fields to debian/control.  Just take a look at other
packages in the Vcs and also see how Maintainer and Uploaders
are handled there.

I would love if someone else - preferably with better knowledge
of this program would be check the package and perhaps do the
actual sponsoring.  If nobody will step up I can upload the
package (but not before Monday next week).

Kind regards and thanks for your work

  Andreas.

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Bug#492842: [Debian-med-packaging] Bug#492842: aeskulap: LP bug 229681: Aeskulap images not seen

2009-03-30 Thread Andreas Tille

On Tue, 29 Jul 2008, Charles Plessy wrote:


Package: aeskulap
Version: 0.2.2b1-2
Severity: grave
Justification: renders package unusable

Hi all,

I was browsing aeskulap's PTS page and found the Ubuntu bug 229681:
https://bugs.launchpad.net/ubuntu/+source/aeskulap/+bug/229681

Basically, the user complains that aeskulap does not display images
anymore.

I tried to use aeskulap with the following DICOM files:

- http://www.barre.nom.fr/medical/samples/files/MR-MONO2-8-16x-heart.gz
- http://www.barre.nom.fr/medical/samples/files/MR-MONO2-16-knee.gz

While I can display them with xmedcon (anther DICOM viewer we package),
with aeskulap I see only plain black. I have not used aeskulap before,
so I do not know how it should work, but I think that we have to take
the Ubuntu bug very seriously (indeed gravely, severitywise).


On the Ubuntu bug [1] page you wrote:

  Charles Plessy  wrote on 2008-09-10:

  Hello,

  we tested aeskulap in Debian and realised that the problem of version
  0.2.2b1-2 is that the version of the libraries on which it depends are
  not correctly specified. It works on freshly installed Debian Lenny
  systems, so it may probably work with Ubuntu Intrepid.

If I understand you correctly this bug can be closed in Debian.  Is
this interpretation true?

Kind regards

   Andreas.


[1] https://bugs.launchpad.net/ubuntu/+source/aeskulap/+bug/229681

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Bug#521819: debian-science: New proj dependencies

2009-03-30 Thread Andreas Tille

On Mon, 30 Mar 2009, fran...@debian.org wrote:


You should change your build-dep from 'proj' to 'libproj-dev' and
eventually also depend on 'proj-bin' if debian-science requires proj
command-line tools to work, i.e.:

/usr/bin/geod /usr/bin/proj /usr/bin/cs2cs /usr/bin/nad2bin
/usr/bin/nad2nad /usr/bin/invgeod /usr/bin/invproj


Yes, debian-science just depends on the command line tools or rather
it wants to provide users who deal with geographical tasks some tools
to deal with these tasks.  So I did:

$ svn diff
Index: debian/changelog
===
--- debian/changelog(Revision 1481)
+++ debian/changelog(Arbeitskopie)
@@ -12,6 +12,8 @@
   * Bumped policy to 3.8.1 and make use of the new feature that
 debian/control allows comment lines starting with # with no
 preceding whitespace. [Policy paragraph 5.2]
+  * tasks/geography: Depend from proj-bin instead of proj
+Closes: #521819

   [ Michael Hanke ]
   * Added preliminary task for cognitive neuroscience.
Index: tasks/geography
===
--- tasks/geography (Revision 1481)
+++ tasks/geography (Arbeitskopie)
@@ -35,6 +35,8 @@

 Depends: qgis-plugin-grass

+Depends: proj-bin
+
 Depends: mapserver-bin, \
  gmt, \
  gpsbabel, \
@@ -47,7 +49,6 @@
  openscenegraph, \
  thuban, \
  drawmap, \
- proj, \
  postgis, \
  grace6, \
  gpstrans, \


Francesco, BTW I really think you should try to understand the idea behind
Debian Pure Blends its metapackage systems and the other advantages you might
gain.  Petter has just started out with some stuff but has not really continued
this.

Kind regards

  Andreas.

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Bug#521975: libgtkdatabox: FTBFS: d-shlibs errors

2009-03-31 Thread Andreas Tille

On Mon, 30 Mar 2009, Daniel Schepler wrote:


Package: libgtkdatabox
Version: 1:0.9.0.1-1
Severity: serious
X-Debbugs-CC: Junichi Uekawa dan...@debian.org, d-shl...@packages.debian.org


From my pbuilder build log:


...
dh_link -plibgtkdatabox-0.9.0-1
dh_installmime -plibgtkdatabox-0.9.0-1
# Call d-shlibmove to comply with library packaging guide
d-devlibdeps debian/libgtkdatabox-0.9.0-1-dev.substvars \
debian/tmp/usr/lib/libgtkdatabox.so
-- libatk1.0-dev package exists.
-- libc6-dev package exists.
-- libcairo2-dev package exists.
-- libfontconfig1-dev package exists.
-- libfreetype6-dev package exists.
devlibs error: There is no package matching [libgio-2.0-0-dev] and noone 
provides it, please report
bug to d-shlibs maintainer
-- libglib2.0-dev package exists.
-- libgtk2.0-dev package exists.
-- libpango1.0-dev package exists.
devlibs error: There is no package matching [libpangoft2-1.0-0-dev] and noone 
provides it, please
report bug to d-shlibs maintainer


I'd like to reassign this bug to d-shlibs but want to clarify with Junichi
before whether this was the intention of this message.

Kind regards

Andreas.

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Bug#522021: [Help] Bug#522021: arb_0.0.20071207.1-7(mips/experimental): FTBFS: missing -fPIC

2009-03-31 Thread Andreas Tille

Hi,

I would like to ask for help of the mips porter team whether they might have a 
clue
why this build fails.  It seems to me that some graphics / Motif issues might be
involved in the problem.

Any help is welcome

   Andreas.

On Tue, 31 Mar 2009, Frank Lichtenheld wrote:


Package: arb
Version: 0.0.20071207.1-7
Severity: important

Hi,

your package failed to build from source.

| Automatic build of arb_0.0.20071207.1-7 on signy by sbuild/mips 98-farm
| Build started at 20090331-0122
| **
| Checking available source versions...
| Fetching source files...
| Reading package lists...
| Building dependency tree...
| Reading state information...
| Need to get 9984kB of source archives.
| Get:1 http://ftp.de.debian.org sid/non-free arb 0.0.20071207.1-7 (dsc) [1603B]
| Get:2 http://ftp.de.debian.org sid/non-free arb 0.0.20071207.1-7 (tar) 
[9950kB]
| Get:3 http://ftp.de.debian.org sid/non-free arb 0.0.20071207.1-7 (diff) 
[33.1kB]
| Fetched 9984kB in 3min38s (45.6kB/s)
| Download complete and in download only mode
| ** Using build dependencies supplied by package:
| Build-Depends: debhelper (= 7), quilt, libmotif-dev, xviewg-dev, 
libxml2-utils, lynx, sablotron, libtiff4-dev, libxaw7-dev, kaffe | free-java-sdk, 
freeglut3-dev | libglu-dev, libglew1.5-dev, libpng12-dev, x11proto-print-dev, 
libxpm-dev, libxp-dev, libglw1-mesa-dev, perl-doc, chrpath
| Checking for already installed source dependencies...
[...]
| gcc -W -Wall  -DLINUX -pipe -DNO_REGEXPR -DGNU  -O4 -DNDEBUG  -DARB_OPENGL 
-DFAKE_VTAB_PTR=char -D_ARB_WINDOW -c GLwMDrawA.c -I. 
-I/build/buildd/arb-0.0.20071207.1/INCLUDE -I/usr/X11R6/include
| In file included from GLwMDrawA.c:41:
| GLwDrawA.c:344: warning: missing initializer
| GLwDrawA.c:344: warning: (near initialization for 
'glwMDrawingAreaClassRec.glwDrawingArea_class')
| GLwDrawA.c: In function 'createColormap':
| GLwDrawA.c:430: warning: unused parameter 'offset'
| GLwDrawA.c: In function 'Redraw':
| GLwDrawA.c:578: warning: unused parameter 'region'
| GLwDrawA.c: In function 'glwInput':
| GLwDrawA.c:651: warning: unused parameter 'params'
| GLwDrawA.c:651: warning: unused parameter 'numParams'
| gcc -W -Wall  -DLINUX -pipe -DNO_REGEXPR -DGNU  -O4 -DNDEBUG  -DARB_OPENGL 
-DFAKE_VTAB_PTR=char -D_ARB_WINDOW -c GLwDrawA.c -I. 
-I/build/buildd/arb-0.0.20071207.1/INCLUDE -I/usr/X11R6/include
| GLwDrawA.c:344: warning: missing initializer
| GLwDrawA.c:344: warning: (near initialization for 
'glwDrawingAreaClassRec.glwDrawingArea_class')
| GLwDrawA.c: In function 'createColormap':
| GLwDrawA.c:430: warning: unused parameter 'offset'
| GLwDrawA.c: In function 'Redraw':
| GLwDrawA.c:578: warning: unused parameter 'region'
| GLwDrawA.c: In function 'glwInput':
| GLwDrawA.c:651: warning: unused parameter 'params'
| GLwDrawA.c:651: warning: unused parameter 'numParams'
| g++ -fmessage-length=0 -Wall -shared -DNO_REGEXPR -DGNU -o libAW.so 
AW_position.o AW_Xm.o AW_at.o AW_button.o AW_click.o AW_device.o 
AW_font_group.o AW_global_awars.o AW_nawar.o AW_preset.o AW_print.o 
AW_question.o AW_size.o AW_status.o AW_window.o AW_xfig.o AW_xfigfont.o 
AW_xfont.o AW_xkey.o  GLwMDrawA.o GLwDrawA.o
| /usr/bin/ld: GLwMDrawA.o: relocation R_MIPS_HI16 against `__gnu_local_gp' can 
not be used when making a shared object; recompile with -fPIC
| GLwMDrawA.o: could not read symbols: Bad value
| collect2: ld returned 1 exit status
| make[2]: *** [libAW.a] Error 1
| make[2]: Leaving directory `/build/buildd/arb-0.0.20071207.1/WINDOW'
| make[1]: *** [WINDOW/libAW.dummy] Error 2
| make[1]: Leaving directory `/build/buildd/arb-0.0.20071207.1'
| make: *** [build-stamp] Error 2
| dpkg-buildpackage: failure: debian/rules build gave error exit status 2
| **
| Build finished at 20090331-0342
| FAILED [dpkg-buildpackage died]

Full build log(s): 
http://experimental.ftbfs.de/build.php?ver=0.0.20071207.1-7pkg=arbarch=mips

Gruesse,
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www: http://www.djpig.de/



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Bug#498261: Bug seems to be fixed for a long time but no upload

2009-03-31 Thread Andreas Tille

Hi,

when checking out the rasmol git repository[1]  I noticed that the
changelog says:

rasmol (2.7.4.2-4) unstable; urgency=low

  * rules: Allow building GTK and X11 versions separately for testing
  * Merge patches/gtk-shortcuts: Add various keyboard shortcuts
to the GTK interface
  * Merge patches/fileopen: Add support for opening more than
one file from the command line. Simplify file opening code,
remove globs and allow to open files with spaces and other
'special' characters. Fix reading files from stdin with '-' arg.
(closes: #498261)

 -- Teemu Ikonen tpiko...@gmail.com  Mon, 08 Sep 2008 17:03:55 +0200


Infortunately the package was not yet uploaded and I wonder what the
reasons might be to not fix an iportant bug neither leave any notice
in the BTS that it is fixed.

Kind regards

Andreas.


[1] http://git.debian.org/git/debian-science/packages/rasmol.git
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Bug#522021: [Debian-med-packaging] [Help] Bug#522021: arb_0.0.20071207.1-7(mips/experimental): FTBFS: missing -fPIC

2009-03-31 Thread Andreas Tille

On Tue, 31 Mar 2009, Frank Lichtenheld wrote:


On Tue, Mar 31, 2009 at 09:49:01AM +0200, Andreas Tille wrote:

Hi,

I would like to ask for help of the mips porter team whether they might have a 
clue
why this build fails.  It seems to me that some graphics / Motif issues might be
involved in the problem.

Any help is welcome

[...]

| gcc -W -Wall  -DLINUX -pipe -DNO_REGEXPR -DGNU  -O4 -DNDEBUG  -DARB_OPENGL 
-DFAKE_VTAB_PTR=char -D_ARB_WINDOW -c GLwMDrawA.c -I. 
-I/build/buildd/arb-0.0.20071207.1/INCLUDE -I/usr/X11R6/include


You might want to start by adding a -fPIC here, like the linker requested.


But I can't test whether it really works - so any help of porters would be 
apreciated.

Kind regards

   Andreas.

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Bug#521975: libgtkdatabox: FTBFS: d-shlibs errors

2009-04-01 Thread Andreas Tille

On Wed, 1 Apr 2009, Junichi Uekawa wrote:


Actually, I realize you have a local copy in debian/, which is still broken.


While I used this in former times to circumvent some problems this is
not true for libdatabox.  Where did you got this impression from?

Kind regards

   Andreas.

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Bug#503367: Again: Bug#503367: plink: file conflict with putty-tools

2009-04-01 Thread Andreas Tille

Hi,

in October last year there was a longish discussion about name space
pollution regarding plink.  If you like to spend some time you should
read the complete log of #503367 [1].

I decided to put an end now on this issue to make sure it will
not remain as is for ever and renamed the entry in /usr/bin.
This is explained in README.Debian of this package (see svn[2]).

Two questions are left on my side:

  1. On the one hand plink upstream claimed on their website[3] that
 Debian *has* renamed plink to snplink (which is not really true
 because the discussion ended without any real action).  But Gentoo
 went the same road to follow Debian.

 So there is one established way which is accepted upstream to handle
 this problem.

 On the other hand there is this other biological project which
 has a snplink as well.[4]  While chances are not really high
 that this software will also be packaged - you can not know.

 So what is better: Just seeking for another name which hopefully
 is singular and asking upstream as well as Gentoo to change as
 well or live with the small risk to run the same circle of name
 space pollution in case the other snplink will be packaged?

  2. Is the information that plink was renamed to snplink visible
 enough or should I rather use a debconf note to make users really
 aware what they have to do?

Kind regards

Andreas.

[1] http://bugs.debian.org/503367
[2] 
http://svn.debian.org/wsvn/debian-med/trunk/packages/plink/trunk/debian/README.Debian?op=filerev=0sc=0
[3] http://pngu.mgh.harvard.edu/~purcell/plink/download.shtml
[4] 
http://www.icr.ac.uk/research/research_sections/cancer_genetics/cancer_genetics_teams/molecular_and_population_genetics/software_and_databases/index.shtml

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Bug#503367: Again: Bug#503367: plink: file conflict with putty-tools

2009-04-02 Thread Andreas Tille

On Thu, 2 Apr 2009, Daniel Leidert wrote:


Two questions are left on my side:

   1. On the one hand plink upstream claimed on their website[3] that
  Debian *has* renamed plink to snplink (which is not really true
  because the discussion ended without any real action).  But Gentoo
  went the same road to follow Debian.

  So there is one established way which is accepted upstream to
  handle this problem.

  On the other hand there is this other biological project which
  has a snplink as well.[4]  While chances are not really high
  that this software will also be packaged - you can not know.


What about using /usr/bin/PLINK? I can't find a requirement in the
policy to use lowercase characters for a binary/script. Maybe I missed
it?


A Plink was discussed and refused [1] and finally *any* rename has the
same problem - it breaks existing scripts.  I personally would not have
a problem to use any case variation.


Well, a NEWS entry is mandatory in this situation. I would further
suggest to put this information into the package description too and
of course leave an entry in README.Debian.


I'll do so.

Thanks

 Andreas.


[1] http://lists.debian.org/debian-devel/2008/10/msg00642.html

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Bug#503367: Again: Bug#503367: plink: file conflict with putty-tools

2009-04-03 Thread Andreas Tille

On Fri, 3 Apr 2009, Steffen Moeller wrote:


we should ask the technical committee to rule over it. And maybe this
needs some voting in the end.


Who is this *we*?  Do you volunteer?
IMHO plink should be renamed because it is way less popular than the
putty tool.  So we will loose this voting anyway and there is much effort
for an foreseable outcome.  IMHO the solution I described in README.Debian
is reasonable for plink users even with existing scripts.


I personally think that we should not rename it. And putty's plink should not 
be renamed
either. The two are in a technical conflict, though with little practical 
consequences. To
me, this situation is preferable over the renaning of the binary of either.


This is a worse solution than a rename.


Please keep in mind that we don't need to package everything. (sn)plink can 
just be
removed from the archive. Or could it move to non-free since it does not adhere 
to
Debian's principles? I need to reread the policy here.


Moving to non-free will not solve the problem and is just wrong
(because it is actually not non-free).  Trying to solve a problem
by pretending wrong facts is a no go.

I'd strongly recommend to settle (together with upstream) for
a reasonable alternative name (I don't care whether it is
snplink, Plink, PLINK or something else) but we should find
a reasonable decision in a short time frame (to not spend to
power into an issue which does not bring anybody foreward).

Kind regards

Andreas.

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Bug#522772: ITP: CDO -- Climate Data Operators

2009-04-07 Thread Andreas Tille

Hi,

a Debian Science task meteorology comes to mind ...

Kind regards

Andreas.

On Mon, 6 Apr 2009, Alastair McKinstry wrote:


Package: wnpp
Severity: wishlist
Owner: Alastair McKinstry mckins...@debian.org

* Package name: CDO
 Version : 1.3.0
 Upstream Author : Uwe Schulzweida  uwe.schulzwe...@zmaw.de
* URL : http://www.mpimet.mpg.de/fileadmin/software/cdo/
* License : GPL2
 Programming Lang: C
 Description : Climate Data Operators - tools for climate data manipulation

CDO is a collection of command line Operators to manipulate and analyse Climate 
model Data.
Supported data formats are GRIB, netCDF, SERVICE, EXTRA and IEG. There are more 
than 400
operators available. The following table provides a brief overview of the main 
categories.

-- System Information:
Debian Release: 5.0
 APT prefers stable
 APT policy: (500, 'stable')
Architecture: powerpc (ppc)



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Bug#522916: must use invoke-rc.d (policy 9.3.3.2)

2009-04-07 Thread Andreas Tille

On Tue, 7 Apr 2009, Holger Levsen wrote:


during a test with piuparts I noticed your package left processes running on
the system after installation and removal. This is due to directly
calling /etc/rc.d/ scripts in your packages maintainer scripts, which is a
violation of policy 9.3.3.2 and must be replaced by using policy-rc.d - see
http://www.debian.org/doc/debian-policy/ch-opersys.html#s9.3.3


Thanks for your investigation.  Before I go for an upload I would like
you to revise my proposed patch:


Index: dict-wn.postinst
===
--- dict-wn.postinst(Revision 35616)
+++ dict-wn.postinst(Arbeitskopie)
@@ -6,14 +6,18 @@

 case $1 in
  configure)
-  if [ -x /usr/sbin/dictdconfig ]; then dictdconfig -w ;fi
+   if [ -x /usr/sbin/dictdconfig ]; then dictdconfig -w ;fi

-  if [ -x /etc/init.d/dictd ]; then /etc/init.d/dictd restart; fi
+   # if [ -x /etc/init.d/dictd ]; then /etc/init.d/dictd restart; fi
+   if which invoke-rc.d /dev/null 21; then
+   invoke-rc.d dictd restart
+   else
+   /etc/init.d/dictd restart
+   fi

- exit 0
- ;;
+   exit 0
+;;

-
 
failed-upgrade/abort-upgrade|abort-remove|abort-deconfigure|in-favour|removing)
 exit 0;
 ;;
Index: changelog
===
--- changelog   (Revision 35616)
+++ changelog   (Arbeitskopie)
@@ -1,3 +1,10 @@
+wordnet (1:3.0-15) unstable; urgency=low
+
+  * Fix usage of init scripts debian/dict-wn.{postinst,prerm}
+Closes: #522916
+
+ -- Andreas Tille ti...@debian.org  Tue, 07 Apr 2009 22:58:07 +0200
+
 wordnet (1:3.0-14) unstable; urgency=low

   * Removed redundant part from description
Index: dict-wn.postrm
===
--- dict-wn.postrm  (Revision 35616)
+++ dict-wn.postrm  (Arbeitskopie)
@@ -4,13 +4,17 @@

 case $1 in
 remove|purge)
- if [ -x /usr/sbin/dictdconfig ]; then dictdconfig -w ;fi
- if [ -x /etc/init.d/dictd ]; then /etc/init.d/dictd restart; fi
+   if [ -x /usr/sbin/dictdconfig ]; then dictdconfig -w ;fi

- exit 0
- ;;
+   # if [ -x /etc/init.d/dictd ]; then /etc/init.d/dictd restart; fi
+if which invoke-rc.d /dev/null 21; then
+   invoke-rc.d dictd restart
+   else
+   /etc/init.d/dictd restart
+   fi
+   exit 0
+;;

-
 upgrade|abort-upgrade|abort-remove|abort-deconfigure|in-favour|removing)
 exit 0;
 ;;

I hope that's it and fits policy properly.

Kind regards

   Andreas.

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Bug#523077: science-physics: suggests a package with a broken name

2009-04-08 Thread Andreas Tille

On Wed, 8 Apr 2009, Eugene V. Lyubimkin wrote:


Package: science-physics
Version: 0.5
Severity: serious
Justification: Policy 5.6.7

Suggests contains 'ESPResSo++, PWscf', but upper-case letters are not allowed in
package names.


Fixed in SVN.  I might consider to lowercase any package names when creating the
control file for a Blend which will prevent such bugs for the future.

Kind regards

 Andreas.

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Bug#522916: must use invoke-rc.d (policy 9.3.3.2)

2009-04-08 Thread Andreas Tille

On Wed, 8 Apr 2009, Holger Levsen wrote:


- if you ask others for review, you shouldn't have whitespace changes in the
diff.


Yes - sorry.  I somehow expected this hint after I sended the mail.


- you shouldn't _restart_ the daemon in postrm :-) (and probably not call
dictconfig neither)


Well, the dictd daemon is *not* part of the dict-wn package.  So it might / will
exist after removing dict-wn.  The package dict-wn just provides one possible
data file for dict and if it is removed the dictd daemon needs to know this
(via a restart).  Do you think it is OK considering this?

BTW, the current invoking of dictd was inspired to work around a problem 
(#357020)
which becomes void now because the serpento package is finally removed.  So 
thanks
for the catch with piuparts.

Kind regards

Andreas.

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Bug#514023: Archive not taken over

2009-03-21 Thread Andreas Tille

On Sat, 21 Mar 2009, David Moreno wrote:


That's correct, the mailing list has been renamed and /most/ of its
services have been migrated. As you say, yes, the web archives still
need to be moved. I hadn't spoken about this since the main reason
for not finishing it was lacking time on my side. Hopefully, during this
weekend, I'll find some time and finish the archive migration. This is
also why I hadn't closed the request bug or sent any notification.


Thanks for the clarification and your work on this.  Just take the
time you need

  Andreas.

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Bug#520747: BioCocoa.app and SequenceConverter.app (Was: Bug#520747: Watch file)

2009-03-23 Thread Andreas Tille

On Sun, 22 Mar 2009, Daniel Leidert wrote:


Please find attached a watch file for biococoa.app. There are two
possible solutions to catch the version. The first one catches all
releases based on the web-SVN service at bioinformatics.org (and also
allows to download a tarball). The second one at least works for the new
releases 2.x.


Many thanks for the patch - it's applied in SVN.  You seem to prefer the
SVN version in this file.  Any reason that you regard it higher than the
download version - any reasons for this?

In general I wonder what the current status of Biococoa.app might be.
Scott Christley has split up a separate application sequenceconverter.app
but neither a new biococoa.app nor sequenceconverter.app was finally uploaded.
Scott could you please elaborate on your plans for an upload?  Any blockers
we should know about?  I just polished the biococoa.app control file a bit
in SVN and wonder whether you regard it fit for upload and whether somebody
with GNUstep knowledge might be able to test whether eveything works like
expected.

Kind regards

Andreas.

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Bug#521002: r-cran-sp: long description no sentence

2009-03-24 Thread Andreas Tille

On Tue, 24 Mar 2009, Gerfried Fuchs wrote:


It would be nice if the long description of your package could consist
of full sentences[1], the first part is not really one. :)


Before we do another round of this non sentence bug reports just have a
look at

 This R package provides functions returning, displaying or writing to
 disk the LaTeX or HTML code associated with the supplied object of
 class xtable.  The package also provides functions converting an R object
 to an xtable object, which can then be printed as a LaTeX or  HTML table.

Kind regards

Andreas.

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Bug#521002: r-cran-sp: long description no sentence

2009-03-24 Thread Andreas Tille

On Tue, 24 Mar 2009, Gerfried Fuchs wrote:


Package: r-cran-xtable


Ahh, I've found the reassign, but I wonder whether you like my change to xtable

--- control (Revision 35604)
+++ control (Arbeitskopie)
@@ -14,7 +14,7 @@
 Architecture: all
 Depends: ${shlibs:Depends}, r-base-core
 Description: GNU R coerce data to LaTeX and HTML tables
- This R package provides functions returning and displaying or writing
- to disk the LaTeX or HTML code associated with the supplied object of
+ This R package provides functions returning, displaying or writing to
+ disk the LaTeX or HTML code associated with the supplied object of
  class xtable.  The package also provides functions converting an R object
  to an xtable object, which can then be printed as a LaTeX or  HTML table.


anyway.  (Private mail is fine.)

Kind regards

Andreas.

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Bug#520747: [Debian-med-packaging] Bug#520747: BioCocoa.app and SequenceConverter.app (Was: Bug#520747: Watch file)

2009-03-25 Thread Andreas Tille

On Tue, 24 Mar 2009, Scott Christley wrote:


There was some copyright/license issues that needed to be resolved.
Those should all be resolved now,


I'd be very happy if somebody might have a look at biococoa.  I have
polished packaging regarding inclusion of documentation and examples,
updating Standards-Version, polishing changelog etc.  The package builds
fine and lintian clean in a pbuilder environment - however I have no
idea about GNUstep and thus can not really test whether everything works
as expected.


I thought that there was a new
release but maybe that didn't happen, I will take a look.


Thanks to Daniel Leidert the watchfile of biococoa is fixed and there is
no need to look.  Packaging SVN is up to date and you can obtain the
latest version via

 uscan --verbose --force-download


Otherwise,
I don't think there is anything blocking an upload.  I'm pretty hectic
this week with an upcoming weekend trip, but hopefully I can resolve
this in the coming week.  I would very much like to see BioCocoa
updated.


Both packages biococoa and sequenceconverter.app build fine and
sequenceconverter starts at least.  If somebody might like to do
some testing (or Scott finds time next week) we might upload
both.

Kind regards

Andreas.

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Bug#520747: [Debian-med-packaging] Bug#520747: BioCocoa.app and SequenceConverter.app (Was: Bug#520747: Watch file)

2009-03-25 Thread Andreas Tille

On Wed, 25 Mar 2009, Yavor Doganov wrote:


GNUstep frameworks are packaged like classic shared libraries (that's
what they are, in fact), i.e. the biococoa source package should build
the binary packages libbiococoa2 and libbiococoa-dev.


Fine.


You don't need
the Replaces/Conflicts/Provides: biococoa.app -- sequenceconverter.app


I had the impression that sequenceconverter.app builds and runs
fine without biococoa - strange, but worked on my machine.


would just build-depend on libbiococoa-dev and end up depending on
libbiococoa2.  If you strongly care about upgrades,
sequenceconverter.app could build also a dummy transitional package
biococoa.app that depends on sequenceconverter.app (to be dropped
after Squeeze).


I'm not sure about this.


If you don't mind, I can provide a patch for that plus some other
fixes that make the package compliant to the (still unwritten) Debian
GNUstep policy.


I would really appreciate any help here - I could even give you
SVN commit permission (if you tell me your alioth login)


Note that there is a GNUstep transition pending (we are currently
waiting for the ffmpeg and poppler transitions), so it would be great
if you upload only when it finishes.


It's fine for me to wait.


Also, one upstream fix is needed: the top-level GNUmakefile should
contain the following line:

LIBRARIES_DEPEND_UPON += $(OBJC_LIBS) $(FND_LIBS)

to actually link against libobjc and libgnustep-base.  If you want to
know the harm this causes for GNUstep transitions, see this subthread:

http://lists.debian.org/debian-release/2009/03/msg00109.html

If you can push this upstream and a new release is pending, that would
be great.  Otherwise, please tell me what patch system do you prefer.


We are using quilt.  You can find the packaging at

  Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/biococoa/trunk/
and
  Vcs-Svn: 
svn://svn.debian.org/svn/debian-med/trunk/packages/sequenceconverter/trunk/

BTW, when doing the actual packaging I was wondering whether a cdbs
module for GNUmake might make sense.  If you are undergoing some
renewal of GNUstep issues this might be an interesting thing to do
to simplify packaging and pushing changes through all packages
quickly in case something might change in the future.

Kind regards and I woudl be happy about any help

   Andreas.

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Bug#520747: [Debian-med-packaging] Bug#520747: BioCocoa.app and SequenceConverter.app (Was: Bug#520747: Watch file)

2009-03-25 Thread Andreas Tille

On Wed, 25 Mar 2009, Yavor Doganov wrote:


On Wed, Mar 25, 2009 at 04:12:11PM +0100, Andreas Tille wrote:

I had the impression that sequenceconverter.app builds and runs
fine without biococoa - strange, but worked on my machine.


Right, I wrongly assumed that it links against BioCocoa.


So most probably we might simply release sequenceconverter.app
completely independant from BioCocoa?


- I could even give you SVN commit permission (if you tell me your
alioth login)


I'm yavor-guest, but maybe it is a good idea to see my patches first :-)


Well, several people read the commit mails and reverting something
should be no problem at all.  So there is no need to hesitate.


BTW, when doing the actual packaging I was wondering whether a cdbs
module for GNUmake might make sense.


There is: /usr/share/cdbs/1/rules/gnustep.mk.  I'll convert biococoa to
use CDBS then, right?


Ahh, that's great - I just not realsied this.  Conversion to CDBS
would be perfectly OK.


If you are undergoing some renewal of GNUstep issues this might be an
interesting thing to do


Yes, although I'm not a fan of CDBS, personally.


Well, I would not call myself a fan - but it works quite good for
team maintainance because you can have a good overview quite quickly.
But only if it fits - there are more complex packages which just
create headaches if you try to turn them to CDBS.  Just decide
what you would regard reasonable for the specific case - it's fine
if you keep the current packaging.

Kind regards

Andreas.

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Bug#520747: [Debian-med-packaging] Bug#520747: BioCocoa.app and SequenceConverter.app (Was: Bug#520747: Watch file)

2009-03-26 Thread Andreas Tille

On Wed, 25 Mar 2009, Yavor Doganov wrote:


Here it is.  I added some comments in debian/rules for things that
might not be entirely obvious to you -- feel free to strip them.


No, comments are perfectly OK - in contrary, they should be there.
I committed your changes and thank you very much for cleaning things
up.

The only thing I wonder about is the following:  Should we file an
ITP for either biococoa (2) or sequenceconverter.app?  While
sequenceconverter.app is the real successor of the former biococoa.app
(source and binary package) it might sound like a new for ftpmaster
but in fact biococoa is the new package regarding content and I
also wonder if we even should conserve the old changelog of
biococoa.app - it's just something else.

Any opinions?

Kind regards

   Andreas.

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Bug#520747: [Debian-med-packaging] Bug#520747: BioCocoa.app and SequenceConverter.app (Was: Bug#520747: Watch file)

2009-03-26 Thread Andreas Tille

On Thu, 26 Mar 2009, Yavor Doganov wrote:


All right.  I like comments, but some maintainers consider them
redundant.


I always consider them helpful.


Thanks!  I see that you added me to the project -- does that mean that
I can commit without pre-approval


Yep!  That was the idea as I said in one of my previous mails.


(only to GNUstep packages, of course)?


Why of course.  If you see a problem feel free to fix it.
But well, sticking to the GNUstep packages is fine for sure.


 If that's too pushy, I'll perfectly understand that and will
submit the diff to the list first.


No, that's far from pushy.  As I said: Several people read the commit
logs and reverting a change is no big deal.


IMHO ITPs are primarily to prevent duplicate work and are redundant in
this case.  The only possible benefit is eventually someone to suggest
improvements to the descriptions.  AFAIK ftpmasters do not have
requirements NEW packages to have ITP bugs filed.


This in principle fits my preference.

Kind regards

  Andreas.

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Bug#278650: feh: wrong remote display with different archs.

2009-03-27 Thread Andreas Tille

On Fri, 27 Mar 2009, Laurent Fousse wrote:


I can't reproduce the problem, running feh 1.3.4.dfsg.1-1 on an i386
remotely from a ppc.


So you would agree if I would close this bug?

Kind regards

   Andreas.

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Bug#514023: Status of this bug?

2009-03-01 Thread Andreas Tille

Hi listmasters,

is there any number of promoters which might convince you that this
list is needed?  I have some announcements to make, some work to do
which should be organised over this list.  I would love to see this
list created in the next seven days if possible.  If you are not
yet convinced I will do the announcements without the list and
will rather mention this bug number to let more people respond here
but I would prefer to announce the existence of the new list.

Kind regards

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Bug#517945: ITP: libxray-absorption-perl -- x-ray absorption data for the elements

2009-03-03 Thread Andreas Tille

On Mon, 2 Mar 2009, Carlo Segre wrote:


Package: wnpp
Severity: wishlist
Owner: Carlo Segre se...@debian.org


* Package name: libxray-absorption-perl
 Version : 2.0.1
 Upstream Author : Bruce Ravel bra...@bnl.gov
* URL : http://cars9.uchicago.edu/svn/libperlxray
* License : Artistic
 Programming Lang: Perl
 Description : x-ray absorption data for the elements

This module supports access to X-ray absorption data.  It is designed
to be a transparent interface to absorption data from a variety of
sources.  Currently, the only sources of data are the 1969 McMaster
tables, the 1999 Elam tables, the 1993 Henke tables, and the 1995
Chantler tables.  The Brennan-Cowen implementation of the
Cromer-Liberman tables is available as a drop-on-top addition to this
package.  More resources can be added easily.


Hi Carlo,

can you imagine applications where this variety of sources includes
x-ray data from medical care?  I'm wondering whether this package might
be an interesting target for the Debian Med physics task.  Or are the
ITPed packages rather targeting at particle physics and do not really
targeting at medical care?

IMHO it would not harm if you would add the answer to this question as
a separate paragraph to the description.

Kind regards

   Andreas.

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Bug#516545: ITP: eprover -- The Equational Theorem Prover E

2009-03-03 Thread Andreas Tille

On Tue, 3 Mar 2009, Petr Pudlak (Debian) wrote:


Hi Andreas, everybody,

I moved the package into the git repository:

Vcs-Git: git://git.debian.org/git/debian-science/packages/eprover.git
Vcs-Browser: http://git.debian.org/?p=debian-science/packages/eprover.git

and adapted the package for GIT.

It's lintian clean, except for a pedantic warning that it doesn't use a patch 
system, which I hope is
OK, since I've converted my dpatches into git revisions.


That's fine.


I'd be happy If somebody could upload the package, or perhaps point out that 
there is something that
should be corrected before uploading.


I'm currently busy but if nobody would step up until Friday - just
come back to me ...

Andreas.

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Bug#471410: Installing accessibility packages by default?

2009-03-05 Thread Andreas Tille

On Thu, 5 Mar 2009, Samuel Thibault wrote:


It has been suggested a few times (471410, 511329, 516723) to
add an accessibility item to tasksel, which would e.g. install
gnome-accessibility.  The task would be automatically selected when
accessibility features was used during d-i itself.


I wonder whether this effort might profit from maintaining metapackages
for accessibility as it is done in the blends effort.  The blends-dev
has tasksel support as well - so it is easily possible to include
accessibility related packages into tasksel.  The extra profit would
be that you can provide an easy overview about accesibility related
programs in Debian - the only way I know is

   $ apt-cache search accessibility

which is quite weak.  Thinks of alternatives like

   http://blends.alioth.debian.org/science/tasks/

(which might even work for non native English speakers) and you also
have a developer related overview about bugs

   http://blends.alioth.debian.org/science/bugs/

There is no extra effort to create these web pages once you defined
the tasks.


`While it is a possible approach to have the installer explicitly
select packages for the users who are going to use the machine,
it is also obvious that an administrator might not know in advance
that a person with special needs is going to use this machine.
If we think this through, we realize that what would be most desireable
is to have accessibility infrastructure installed by default on a
default desktop, so that a person with special needs can just activate
it at login time if they need to.'


I admit that my suggestion above does not really help in this aspect.
On the other hand there were some ideas raised in the past to enable
a user to install certain tasks quickly inside the Blends framework.
Perhaps we should raise this topic again.


`What if, for example, you walk up to a friend/coworker and talk about
some issue.  You end up wanting to show them something, so you'd
actually like to login on tehir Linux machine with accessibility enabled
so that you can work together on the project.  However, since nobody
thought their machine would ever be used by a disabled person, the
necessary software would not be installed.'


The problem is that the typical admin does not have the specific
knowledge what actually is needed.  The idea to iron out this knowledge
inside the tasks files to enable admins who have not enough specific
knowledge about the needs of their users is one means to help in
this issue.


`That is why I think ultimately, accessibility infrastructure needs to be part
of the default desktop installation.  There are a few other scenarios as well,
like public workstations (for instance in universities) running Linux.
Currently, for them to be accessible, the admin staff needs to know all the ins
and outs of accessibility, or they at least have to make a conscious decission
about providing it to users.  If accessibility would work by default,
the chance of success for disabled people trying to find an accessible
computer would be much higher.'


I perfectly see the point here.  On the other hand I assume there are
most probably urgently needed packages who should be installed per
default and others which are just Recommended and Suggested.  So IMHO
it makes sense to have a accessibility-gnome / accessibility-kde
(perhaps accessibility-desktop) metapackages which are part of a
default installation.  But most probably there are other packages
which should be handled with different priority and you can perfectly
handle these by using metapackages.  The advantage of using
accessibility-gnome / accessibility-kde metapackages is that you
can perfectly handle the dependencies inside the accessibility project
because there will be no need to change d-i or the Gnome / KDE tasks.
They need only depend from one single package and you can change the
dependencies on your own in case some additional packages will show up
or some names will be changed for whatever reason.


So, I'm asking: would it seem reasonable to ask tasksel to install
accessibility packages along desktop packages?


IMHO yes - but in the way I suggested above and not by using explicite
package names.

Kind regards

 Andreas.

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Bug#517945: ITP: libxray-absorption-perl -- x-ray absorption data for the elements

2009-03-05 Thread Andreas Tille

On Thu, 5 Mar 2009, Carlo Segre wrote:


This module supports access to X-ray absorption data.  It is designed
to be a transparent interface to absorption data from a variety of
sources.  Currently, the only sources of data are the 1969 McMaster
tables, the 1999 Elam tables, the 1993 Henke tables, and the 1995
Chantler tables.  The Brennan-Cowen implementation of the
Cromer-Liberman tables is available as a drop-on-top addition to this
package.  More resources can be added easily.


Hi Carlo,

can you imagine applications where this variety of sources includes
x-ray data from medical care?  I'm wondering whether this package might
be an interesting target for the Debian Med physics task.  Or are the
ITPed packages rather targeting at particle physics and do not really
targeting at medical care?

IMHO it would not harm if you would add the answer to this question as
a separate paragraph to the description.



Hmm, the answer is that these modules allow the calculation of how matter 
absorbs xrays of different energies.  The McMaster tables are the basic 
reference and have been extended by the Elam and Henke tables to provide 
additional quantities (fluorescence and total cross-section).  The 
calculations can beused byt many different kinds of researchers, basically 
anyone who is interested in the interaction of x-rays with matter.  I am sure 
that this includes medical physicists but I do not know if there are other 
tabulations of data specifically made for medical physics.


Well, I just propagate this information to Debian Med list.  If nobody
raises explicit interest we will leave it out.  IMHO a suggests in med-physics
will not really harm if anybody might see some use for it.  Thanks for
the clarification anyway.

The calculations are probably not terribly useful to particle physicists 
though, more to condensed matter and materials physicists and chemists. These 
modules are necessary components for the horae suite of programs for analysis 
of x-ray absorption spectroscopy and they used to be hidden in the horae 
package but have been split out now.


So this might make sense in science-physics and science-chemistry as well.

i will certainly consider improving the long description in future releases. 
For now, i prefer to leave them in the incoming queue as they are.


That's fine for sure.

Kind regards

Andreas.

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Bug#516545: ITP: eprover -- The Equational Theorem Prover E

2009-03-05 Thread Andreas Tille

On Tue, 3 Mar 2009, Petr Pudlak (Debian) wrote:


I moved the package into the git repository:

Vcs-Git: git://git.debian.org/git/debian-science/packages/eprover.git
Vcs-Browser: http://git.debian.org/?p=debian-science/packages/eprover.git

and adapted the package for GIT.


I commited some changes (basically changed the Debian version of the package
to -1 and moved the doc/examples to /usr/share/doc/eprover instead of the
doc directories of these packages.  You might consider adding symlinks for
cosistency reasons - but users will look for the docs in /usr/share/doc/eprover
and if I'm not completely missleaded this is usual style of packaging (I did
not consulted the docs).

If you are happy with these changes I might upload in the next couple of days

  Andreas.

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Bug#471410: Installing accessibility packages by default?

2009-03-06 Thread Andreas Tille

On Thu, 5 Mar 2009, Samuel Thibault wrote:


   $ apt-cache search accessibility

which is quite weak.


Tags FTW.  Look for Accessibility tags and you'll find a lot of
packages.


Sure.  But do all our package handling tool support DebTags?
Are our users aware of DebTags.  (Well I admit they might fail
to find metapackages as well.)  So I'd regard DebTags as a very
important technique and joining DebTags information with Blends
techniques is quite high on my todo list.


Thinks of alternatives like

   http://blends.alioth.debian.org/science/tasks/
   http://blends.alioth.debian.org/science/bugs/


Let me point out something which I think is important (even if I think
that's not what you meant): accessibility is not a task. It's like i18n,
it's orthogonal to tasks: for all the tasks above you actually need
accessibility support.


I perfectly got this information out of your last mail.  But IMHO this
is rather a question of terminology.  I'd try to find out what might be
helpful for users and IMHO the Blends technique is quite useful.  Feel
free to suggest a better terminus than task which fits all needs.


I do not mean that the tool itself shouldn't be used of course.


Fine. ;-)


The admin, no, but you (the disabled person) do know and just ask your
friend/coworker to run e.g. orca (already installed by default). With
USB braille devices, it would even be possible to automatically start
it, no even need to sudo.


That's fine for this specific case.  But my idea is that it is easier
to ask for not by default installed packages on the phone line to your
local admin if you have to ask for a single metapackage rather than a
list of packages.  While I share your point that a default machine should
have all needed accessibility features there might be a list of suggested
packages or even new packages.   In the later case would an apt-get update
be sufficient to include new software if the metapackage was properly
adjusted and net even a phone call would be needed.


The idea to iron out this knowledge inside the tasks files to enable
admins who have not enough specific knowledge about the needs of their
users is one means to help in this issue.


Yes, we definitely need to have some sort of database that allows people
to know the name of the tools they can try to use to help them anyway.


Fine.  That's what I'm talking about.


So IMHO it makes sense to have a accessibility-gnome /
accessibility-kde (perhaps accessibility-desktop) metapackages which
are part of a default installation.


Which can Depend/Recommend/Suggest depending on the criticity of the
help provided by various packages:
- can't use the computer without it (e.g. screen reader for blind people).
- hard for me to use the computer without it (e.g. color scheme).
- makes me more efficient (e.g. dasher).


Yes, that's the idea.


The advantage of using accessibility-gnome / accessibility-kde
metapackages is that you can perfectly handle the dependencies inside
the accessibility project because there will be no need to change d-i
or the Gnome / KDE tasks.


Yes, I also think that'd be better.


IMHO yes - but in the way I suggested above and not by using explicite
package names.


Sure. We don't want to have to bother d-i each time new accessibility
packages get added :)


Fine.

If you want to follow this idea I'd suggest the following things:

  0. Try to convince listmaster to fix bug #514023 and subscribe the
 resulting mailing list debian-blends.  I see a big need to have
 at least one member of the accessibility team lurking on the
 Blends list to make sure that we do not trap into the pitfalls
 of choosing narrow minded names (like tasks) or just do other
 things which are contra productive for your goal.
  1. I used your nice classification page [1] to create the stuff
 you need to create tasks and bugs pages which are linked here:
  http://blends.alioth.debian.org/accessibility/
 You can adjust the informatio in the related SVN

  
svn://svn.debian.org/wsvn/blends/projects/accessibility/trunk/debian-accessibility/tasks

 Please read my comments and fix the info there!
 I can add you to the blends team or you can send me a patch.
 BTW, thanks to your fine software categorisation page the
 creation of the tasks files took me about 15 minutes.  IMHO
 the result of the tasks and bugs pages is worth this effort.
  2. Try to investigate whether something is wrong with your packages.
 a) http://blends.alioth.debian.org/accessibility/tasks/console.html
says that these packages do not have a homepage.  This is possibly
not true but the control file of the package is lacking the
Homepage field.  If you fix the package control information
the tasks page will be fixed after the next cron job run
(twice a day).
 b) Consider group maintenance in a common repository - it has
turned out a good means to fix things like missing Homepage

Bug#370822: About xteddy bug #370822

2009-03-07 Thread Andreas Tille

On Fri, 6 Mar 2009, Kumar Appaiah wrote:


I just wanted to ask you whether you have seen my patch for #370822
already, and whether you need something else to be done there as well.

I usually don't nag people, but I took the liberty of asking you since
you are usually quick with mail (unless you are busy, of course), and
hoped you wouldn't mind.

Your nagging is perfectly OK.  I applied your patch and builded a
new upstream version from it (as I did with previous versions of
XTeddy because upstream does not work any more on XTeddy but volunteers
to put new versions on his official homepage.  This sounds reasonable
to me to let other distribs profit from it.  Once this new version
is online (or after a couple of further days of waiting) I'll upload.

Kind regards and thanks for your patch (as well as sorry for the unusual
long delay)

 Andreas.

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Bug#471410: Installing accessibility packages by default?

2009-03-07 Thread Andreas Tille

On Sat, 7 Mar 2009, Samuel Thibault wrote:


I'll send you a patch to expand it to a somewhat bigger list.


Great.  It is applied and shows up at the tasks pages now.


I'm sthibaul-guest on alioth.


You are now able to commit the changes yourself.

Kind regards

  Andreas.

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Bug#370822: About xteddy bug #370822

2009-03-08 Thread Andreas Tille

On Sat, 7 Mar 2009, Kumar Appaiah wrote:


Wonderful to hear that upstream will support your release. It would
be nice to synchronize the upload with the release on the official
homepage.


This exactly is my plan

 Andreas.

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Bug#518880: #518880 ITP: dots -- braille translation user interface

2009-03-09 Thread Andreas Tille

On Mon, 9 Mar 2009, Samuel Thibault wrote:


* Package name: dots
 Version : 0.0.20090222
 Upstream Author : Eitan Isaacson ei...@ascender.com
* URL : https://github.com/eeejay/dots/tree
* License : GPLv3
 Description : braille translation user interface
Dots is a user interface for liblouisxml, a braille translation engine
that can translate XML and MS Word documents into transcribed braille.


I just want to mention that it is perfectly possible to include
dots at this state inti the tasks files.  I usually do this to
make sure I'll not forget it later.  The metapackage building tools
are clever enough to turn dependencies of not (yet) existing packages
into Suggests - so the metapackage will be valid from the beginning.
The web page building tools will ignore it (there is a warning issued
at command line - see
alioth:/var/lib/gforge/chroot/home/groups/blends/webtools/logs/ )
and you might even add some additional information (including the
number of the WNPP bug) to get it listed as prospective package -
see the examples in Debian Med tasks files or read the blends doc[1].

I'd leave it to your decision how long you estimate the delay between
issuing the WNPP bug and the final upload.  BTW, it is planed to even
parse the new queue to obtain the needed information for the tasks
page (but this needs some preparation).

Kind regards

  Andreas.

[1] http://blends.alioth.debian.org/blends/ch-sentinel.en.html#s-packageslist

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Bug#585457: IGV dependencies

2010-06-11 Thread Andreas Tille
Hi Shaun,

On Thu, Jun 10, 2010 at 11:55:54AM -0700, Shaun Jackman wrote:
 IGV has a lot of dependencies, and the list follows. Many of these
 dependencies are already in Debian; many others are not. Where the
 dependency is satisfied, I've given the Debian package name. Where
 it's not satisfied, I've given the upstream URL.

thanks for your ITP which is quite interesting for Debian Med.  Will you
consider also packaging the dependencies?  I woud suggest coordination
with debian-j...@lists.debian.org.  Perhaps there is some work ongoing
or some help can be given.
 
Kind regards

Andreas.

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Bug#586066: libcomplearn: Typo in watch file leads to reporting new upstream version

2010-06-16 Thread Andreas Tille
Package: libcomplearn
Severity: minor
Tags: patch


Hi,

I was alarmed by the new version available message I've got but then
I noticed that there is just a missing '.' in the debian/watch file.
Please use this as watch file content:


version=3
http://complearn.org/download.html \
  downloads/libcomplearn-([\d\.]*)\.tar\.gz


BTW, I wonder whether you might be interested in putting the package
under team maintenance of the Debian Science team.  This would mean
using the mailing list as maintainer and putting yourself as uploader.
It is suggested to either use the Debian Science Git or SVN repository
to enable other team members to cooperate.

Kind regards and thanks for maintaining libcomplearn

  Andreas.

-- System Information:
Debian Release: squeeze/sid
  APT prefers stable
  APT policy: (500, 'stable')
Architecture: i386 (i686)

Kernel: Linux 2.6.18-xenU (SMP w/1 CPU core)
Locale: lang=de...@euro, lc_ctype=de...@euro (charmap=ISO-8859-15)
Shell: /bin/sh linked to /bin/bash



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Bug#586291: wesnoth-1.8: Please rename to wesnoth and remove older versions

2010-06-18 Thread Andreas Tille
Package: wesnoth-1.8
Severity: normal


Hi,

I would regard it as highly confusing if the new version of a program is
hidden behind a version number and I stick to the old version after an
upgrade.  It took me some time to realise that we actually have wesnoth
1.8 in Debian (I admit I was not particularly interested).  Morover I
really fail to see any reason why Debian should provide different
versions of random games.  So I would strongly suggest to replace the
wesnoth packages of version 1.6 by the packages which are now named
wesnoth-1.8.

Kind regards

 Andreas.


-- System Information:
Debian Release: squeeze/sid
  APT prefers stable
  APT policy: (500, 'stable')
Architecture: i386 (i686)

Kernel: Linux 2.6.18-xenU (SMP w/1 CPU core)
Locale: lang=de...@euro, lc_ctype=de...@euro (charmap=ISO-8859-15)
Shell: /bin/sh linked to /bin/bash



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Bug#586291: wesnoth-1.8: Please rename to wesnoth and remove older versions

2010-06-18 Thread Andreas Tille
On Fri, Jun 18, 2010 at 09:58:00AM +0200, Gerfried Fuchs wrote:
  There will be a meta package, as outlined in my blog post:
 http://rhonda.deb.at/blog/debian/2010/06/09

I'm lacking an explanation what might make Wesnoth so special compared
to other games that Debian (aka Release team and Security team) need to
support two different versions.  IMHO this is unneeded work and
over-engineering.  Having a metapackage which picks the recent stable
upstream version might be OK.  I do not think that we should actually
release two different versions in stable Debian.

Kind regards

Andreas.

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Bug#586291: wesnoth-1.8: Please rename to wesnoth and remove older versions

2010-06-18 Thread Andreas Tille
On Fri, Jun 18, 2010 at 11:19:19AM +0200, Gerfried Fuchs wrote:
  I'm lacking the information that you are part of either team or are
 needed to specifically be made aware of the communication with those
 teams.

I can give you precise information about this: I'm not a part of either
team - I just was trying to apply common sense and was deducing from
former similar cases (for instance Zope, where RC team was fighting hard
about reducing the number of versions inside Debian).
 
  Let me cite again from the blog entry, maybe you missed that paragraph:
 
 People asked for a way to be able to install different branches
 side-by-side so that they can keep the old stable branch around for
 finishing started campaigns there while still being able to play with
 their friends multiplayer games using the new stable branch. Also people
 using the development version wanted to not having to get rid of the
 stable version just to use the development branch.

I can confirm that I have read this.  Do you want me to quote numerous
requests of scientists who need some specific versions of certain
programs?  IMHO Debian will fail in consistently support all those
requests and I fail to see why Wesnoth (BTW, I like it as well) should
make here an exception.
 
  IMHO this is unneeded work and over-engineering.
 
  IMNSHO you are not the package maintainer and neither involved in the
 upstream development or the bug management of the package, might it be
 in the wesnoth forums, the Debian BTS or Ubuntu lanuchpad. Also you
 aren't the one doing the work so I'm not sure what makes you competent
 to judge the benefits in respect to the needed work for it.

I reported a bug as a user of Debian and specifically wesnoth and the
problem I detected was that I was failing in realising that Debian has
packages for never versions but no smooth upgrade path.  This
information belongs to the BTS and the fact that you have a promise for
your solution does not solve this bug report.

Up to now I was not aware of the fact that a user needs to have some
specific features as you are requesting above to be able to report a
problem.

I have drawn the line further by proposing a solution for the problem -
I did not called it patch and considering your answer this would not
have been accepted.  BTW, I see no need to question the qualification
for certain opinions of fellow DDs.
 
  Having a metapackage which picks the recent stable upstream version
  might be OK.  I do not think that we should actually release two
  different versions in stable Debian.
 
  I do not think that I anywhere mentioned that it is actually planed to
 release two different versions in stable Debian. We didn't and we don't
 plan to.

So why are you making so much fuzz about my bug report instead of
just answering this way?

Kind regards

Andreas.

PS: For me the issue is OK and needs no further discussion and so I
will probably stay silent about this.

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Bug#586618: Finding wrong packages in depencency list (Was: education-desktop-lxde: Mistake in its suggested packages)

2010-06-21 Thread Andreas Tille
Hi,

when reading this bug report I would like to *repeat* my hint which
I have given since about 1.5 years in different forms that anybody
with a login on Alioth can see this kind of problems by doing a

   less 
/var/lib/gforge/chroot/home/users/tille/blends/webtools/logs/debian-edu.err

For your comfort I'm attaching a (little bit stripped) version from
today in the end of this mail.  I would strongly advise to browse your
tasks files for the packages below and check for the reasons why the
packages mentioned in the log are not in the Debian package pool.  The
reasons might be various.  One might be misspellings as in this bug
report and there might be more of them which needs fixing.  Other
reasons might be that a package was removed from Debian - it makes
no sense to keep them in the tasks files any more.  A further reason
might be that you wanted to add the package as a prospective package
but forgot the Pkg-Description field in the tasks file.  

If you want to prevent bugs like this just work down this list.

BTW, I fixed this actual bug in SVN.

Kind regards

  Andreas.

Missing description for package gstar.  This package will be ignored completely.
Missing description for package xephem.  This package will be ignored 
completely.
Warning: Dependency with unknown status: lum (Task chemistry)
Missing description for package xpovchem.  This package will be ignored 
completely.
Missing description for package mek.  This package will be ignored completely.
Missing description for package xem.  This package will be ignored completely.
Missing description for package lum.  This package will be ignored completely.
-- nullidentd is mentioned explicitely in dependency list
Do not keep a record of virtual package ident-server which has explicite 
package dependencies
Missing description for package dpt-raidutil.  This package will be ignored 
completely.
Missing description for package smartsuite.  This package will be ignored 
completely.
Missing description for package gnome2-user-guide.  This package will be 
ignored completely.
Missing description for package language-support-en.  This package will be 
ignored completely.
Missing description for package sessreg.  This package will be ignored 
completely.
Missing description for package xdriinfo.  This package will be ignored 
completely.
Missing description for package xkeyboard-config.  This package will be ignored 
completely.
Missing description for package xmessage.  This package will be ignored 
completely.
Missing description for package nbsmtp.  This package will be ignored 
completely.
Missing description for package ipmasqadm.  This package will be ignored 
completely.
Missing description for package libsasl2-modules-mysql.  This package will be 
ignored completely.
Missing description for package libgnutls12.  This package will be ignored 
completely.
Missing description for package libconfigfile-perl.  This package will be 
ignored completely.
Missing description for package update.  This package will be ignored 
completely.
Missing description for package nvidia-kernel-legacy-2.6.18-4-486.  This 
package will be ignored completely.
Missing description for package nvidia-kernel-legacy-2.6.18-4-686.  This 
package will be ignored completely.
Missing description for package nvidia-kernel-legacy-2.6.18-4-k7.  This package 
will be ignored completely.
Missing description for package fvwm95.  This package will be ignored 
completely.
Missing description for package sysv-rc-bootsplash.  This package will be 
ignored completely.
Warning: Dependency with unknown status: linux-headers-2.6.24-1-686 (Task 
common)
Missing description for package linux-image-2.6.24-1-686.  This package will be 
ignored completely.
Missing description for package linux-headers-2.6.24-1-686.  This package will 
be ignored completely.
Missing description for package cupsomatic-ppd.  This package will be ignored 
completely.
Missing description for package gnome-mag (= 1:0.14.10).  This package will be 
ignored completely.
Missing description for package x-window-manager.  This package will be ignored 
completely.
Missing description for package kpaint.  This package will be ignored 
completely.
Missing description for package kmidi.  This package will be ignored completely.
Missing description for package kpm.  This package will be ignored completely.
Missing description for package koffice-i18n-se.  This package will be ignored 
completely.
Warning: Dependency with unknown status: kschoolmenu (Task desktop-kde)
Missing description for package kschoolmenu.  This package will be ignored 
completely.
Missing description for package potoxx.  This package will be ignored 
completely.
Missing description for package mtpint.  This package will be ignored 
completely.
Missing description for package xfonts-base-transcoded.  This package will be 
ignored completely.
Missing description for package openoffice.org-hyphenation.  This package will 
be ignored completely.

Bug#588445: Bug#588445: imagej: fails to start

2010-07-08 Thread Andreas Tille
On Thu, Jul 08, 2010 at 03:25:42PM +0200, François Boulogne wrote:
 I installed openjdk-6-jre, and it works like a charm here. :)

So I'll upload a package which just drops the alternative java2-runtime
as Dependency.

Greetings from Bordeaux (LSM)

   Andreas.

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Bug#588632: ITP: freediams -- Pharmaceutical drugs prescriptor

2010-07-10 Thread Andreas Tille
Package: wnpp
Severity: wishlist
Owner: Andreas Tille andr...@an3as.eu

* Package name: freediams
  Version : 0.4.2
  Upstream Author : Eric Maeker eric.mae...@free.fr
* URL : http://www.freemedforms.com/
* License : BSD
  Programming Lang: C++
  Description : Pharmaceutical drugs prescriptor
 FreeDiams prescriber is the result of FreeMedForms prescriber
 plugins built into a standalone application.
 FreeDiams is a multi-platform (MacOS, Linux, FreeBSD, Windows),
 free and open source released under the new BSD license
 application. It is developed by medical doctors and is intended
 for use by these same professionals. It can be used alone to
 prescribe and / or test drug interactions within a prescription.
 It can be linked to any application thanks to its command line
 parameters. FreeDiams can use several drugs database. Are
 currently under development: Drugs database for the Canada and
 the USA. The french drugs database is available and allows the
 calculation of drug interactions through data AFSSAPS.

The packaging is done in the Debian Med team and available at
 svn://svn.debian.org/svn/debian-med/trunk/packages/freediams/trunk/

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  APT policy: (500, 'stable')
Architecture: i386 (i686)



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Bug#588812: lists.debian.org: Please create Debian GIS mailing list

2010-07-12 Thread Andreas Tille
Package: lists.debian.org
Severity: wishlist

Hi listmasters,

after some discussion on the pkg-grass mailing lists[1] which are currently
used to do general discussions and not only issues about packaging GRASS
we came up with the conclusion that it is better to have a dedicated
mailing list for Debian GIS.  The fact that metapackages of a Debian GIS
Blend were just accepted by ftpmaster lets us think there now is a good
moment to do so.

Here is some description of the scope:

  The goal of the Debian GIS project is improving Debian to make it the
  best distribution for professional Geographical Information Systems,
  support of GPS devices and providing various OpenStreetMap tools to make
  Debian the distribution of choice for mappers.

  Home: http://wiki.debian.org/DebianGis

Kind regards and thanks for maintaining lists.debian.org

  Andreas.


[1] 
http://lists.alioth.debian.org/pipermail/pkg-grass-devel/2010-July/007756.html

-- System Information:
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  APT prefers stable
  APT policy: (500, 'stable')
Architecture: i386 (i686)

Kernel: Linux 2.6.18-xenU (SMP w/1 CPU core)
Locale: lang=de...@euro, lc_ctype=de...@euro (charmap=ISO-8859-15)
Shell: /bin/sh linked to /bin/bash



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Bug#588812: [DebianGIS] Bug#588812: lists.debian.org: Please create Debian GIS mailing list

2010-07-12 Thread Andreas Tille
On Mon, Jul 12, 2010 at 08:15:10AM -0700, Hamish wrote:
 Yo!! more than 29 minutes between publicly posting a request-
 for-comments (in a CC) and declaring a motion passed and acting
 on it, please!  Not cool.

Sorry, if I stepped on anybodys shoes (and yes, it is actually not so
cool here (32°C in my office :-().  I had some private mail exchange
with David at the weekend which leaded me to a probably quicker action
than needed.
 
 Francesco may have more to say re. the associated -dev
 notification list.  I suggest to wait for his input.

Yes.

KInd regards

   Andreas. 

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Bug#588812: [DebianGIS-dev] Debian GIS metapackages available [Was: debian-gis_0.0.1_i386.changes ACCEPTED]

2010-07-14 Thread Andreas Tille
Hi Francesco,

On Tue, Jul 13, 2010 at 03:40:53PM +0200, Francesco P. Lovergine wrote:
 
 I have not specific preferences about lists, I simply would note that
 pkg-grass-general/devel were born at the time to manage a low traffic
 packaging oriented list and listmasters had the opinion that alioth
 lists were appropriate for that.

I hope that listmasters will agree that this is not the case any more.

 That said, I would also note that
 current -general list is closed to subscribers, while debian-gis
 would be open to the world (as generally done for all listmasters lists), 
 with obvious consequence for subscribers about spamming...

The pros and cons are heavily discussed in the past and I do not think
it makes sense to repeat this discussion.  I personally get about one or
two mails per month from each mailinlist @l.d.o thanks to the
spamfilters the listmasters applied (thanks to the effort of
listmasters!) and local SPAM filters.  That's IMHO acceptable.

I take your mail as somethink like it is fine for me to create the list
if you care for it and thus I hope the mailing list can be created soon.

Question to listmasters:  Is it possible to take over the content of the
list archive of pkg-grass-general to debian-gis archive?  I guess the
different listservers might make this hard and I do not really want to
put this on you.  But if there would be a reasonable way to do this it
would be probably a good idea.

Kind regards

   Andreas.

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Bug#589042: ITP: debichem -- Set of Blends metapackages for DebiChem

2010-07-14 Thread Andreas Tille
Package: wnpp
Severity: wishlist
Owner: Andreas Tille ti...@debian.org

* Package name: debichem
  Version : 0.0.1
  Upstream Author : Michael Banck mba...@debian.org, Andreas Tille 
ti...@debian.org
* URL : Native package
* License : GPL
  Description : Set of Blends metapackages for DebiChem

 The source package will create a set of metapackages for the different
 tasks defined by the DebiChem project to support people working with in
 the field of chemistry finding their stuff easily in the pool of Debian
 packages.  The metapackages should help the DebiChem project to support
 their users better by simpler installation as well better documentation
 because the work of the project will be easily displayed by the Blends
 tools at
 http://blends.alioth.debian.org/debichem/tasks/


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Bug#589928: games-thumbnails: Please use screenshots.debian.net service to obtain screenshots

2010-07-22 Thread Andreas Tille
Package: games-thumbnails
Severity: wishlist

Hi,

I would like to suggest that you obtain the screenshots directly from
screenshots.debian.net to build the source of this package instead of
asking users to send screenshots via mail.  I'm really sure that you
will be able to find a way to set up a query to the database which is
running screenshots.debian.net which also has a simple json interface.
The screenshots might be reduced to the needed size afterwards.

The advantage of this procedure would be to make the way you provide
screenshots for Debian packages uniform and attractive for users.  Also
please make sure all screenshots gathered by the GoPlay e-mail
interface will be propagated to screenshots.debian.net.

If you think this wishlist bug makes sense but you might need some
help for realisation I'd volunteer to do so.

Kind regards

Andreas.

-- System Information:
Debian Release: squeeze/sid
  APT prefers stable
  APT policy: (500, 'stable')
Architecture: i386 (i686)

Kernel: Linux 2.6.18-xenU (SMP w/1 CPU core)
Locale: lang=de...@euro, lc_ctype=de...@euro (charmap=ISO-8859-15)
Shell: /bin/sh linked to /bin/bash



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Bug#584194: tclcl-dev and libctapimkt0-dev: error when trying to install together

2010-06-02 Thread Andreas Tille
Hi Claudia,

the naming conflicts with ctapimkt become worse as you see.  Both
header files

   /usr/include/config.h in this bug report and
   /usr/include/ctapi.h  in #557495

have naming conflicts.  Putting a header file with such a generic name
like config.h into a default directory is bad and should be changed.  So
my advise to solve both issues by creating a subdirectory

   /usr/include/ctapimkt

and move both files to this location.  This is one suggestion I made
previousely according to #557495 and the reason to follow this
suggestion now, after Simon Richter who tried to provide a general
ctapi.h has resigned from most of his Debian work, becomes much
stronger.  So please fix this in your upstream code.  Otherwise the
library will not make it into the next Debian release and I will ask
ftpmaster for removal of this package because it causes other packages
to fail.

Remark: IMHO also tclcl-dev should not provide a file
 /usr/include/config.h
and I would consider this also as very bad style.

Kind regards

 Andreas.

On Wed, Jun 02, 2010 at 08:27:32AM +0200, Ralf Treinen wrote:
 Package: libctapimkt0-dev,tclcl-dev
 Version: libctapimkt0-dev/1.0.1-1
 Version: tclcl-dev/1.20~RC2-1
 Severity: serious
 User: trei...@debian.org
 Usertags: edos-file-overwrite
 
 Date: 2010-06-02
 Architecture: amd64
 Distribution: sid
 
 Hi,
 
 automatic installation tests of packages that share a file and at the
 same time do not conflict by their package dependency relationships has
 detected the following problem:
 
 
 WARNING: The following packages cannot be authenticated!
   libc-dev-bin linux-libc-dev libc6-dev libctapimkt0 libctapimkt0-dev
   tclcl-dev
 Authentication warning overridden.
 Can not write log, openpty() failed (/dev/pts not mounted?)
 Selecting previously deselected package libc-dev-bin.
 (Reading database ... 12205 files and directories currently installed.)
 Unpacking libc-dev-bin (from .../libc-dev-bin_2.11.1-2_amd64.deb) ...
 Selecting previously deselected package linux-libc-dev.
 Unpacking linux-libc-dev (from .../linux-libc-dev_2.6.32-15_amd64.deb) ...
 Selecting previously deselected package libc6-dev.
 Unpacking libc6-dev (from .../libc6-dev_2.11.1-2_amd64.deb) ...
 Selecting previously deselected package libctapimkt0.
 Unpacking libctapimkt0 (from .../libctapimkt0_1.0.1-1_amd64.deb) ...
 Selecting previously deselected package libctapimkt0-dev.
 Unpacking libctapimkt0-dev (from .../libctapimkt0-dev_1.0.1-1_amd64.deb) ...
 Selecting previously deselected package tclcl-dev.
 Unpacking tclcl-dev (from .../tclcl-dev_1.20~RC2-1_amd64.deb) ...
 dpkg: error processing /var/cache/apt/archives/tclcl-dev_1.20~RC2-1_amd64.deb 
 (--unpack):
  trying to overwrite '/usr/include/config.h', which is also in package 
 libctapimkt0-dev 0:1.0.1-1
 dpkg-deb: subprocess paste killed by signal (Broken pipe)
 Processing triggers for man-db ...
 Errors were encountered while processing:
  /var/cache/apt/archives/tclcl-dev_1.20~RC2-1_amd64.deb
 E: Sub-process /usr/bin/dpkg returned an error code (1)
 
 
 This is a serious bug as it makes installation fail, and violates
 sections 7.6.1 and 10.1 of the policy. An optimal solution would
 consist in only one of the packages installing that file, and renaming
 or removing the file in the other package. Depending on the
 circumstances you might also consider Replace relations or file
 diversions. If the conflicting situation cannot be resolved then, as a
 last resort, the two packages have to declare a mutual
 Conflict. Please take into account that Replaces, Conflicts and
 diversions should only be used when packages provide different
 implementations for the same functionality.
 
 Here is a list of files that are known to be shared by both packages
 (according to the Contents file for sid/amd64, which may be
 slightly out of sync):
 
   /usr/include/config.h
 
 This bug is assigned to both packages. If you, the maintainers of
 the two packages in question, have agreed on which of the packages will
 resolve the problem please reassign the bug to that package.
 
 -Ralf.
 
 PS: for more information about the detection of file overwrite errors
 of this kind see http://edos.debian.net/file-overwrites/.
 
 
 
 ___
 Debian-med-packaging mailing list
 debian-med-packag...@lists.alioth.debian.org
 http://lists.alioth.debian.org/mailman/listinfo/debian-med-packaging
 

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Bug#592725: release.debian.org: Non-free Packages hit by non-functional non-free autobuilders

2010-08-16 Thread Andreas Tille
On Sun, Aug 15, 2010 at 07:13:36PM +0200, Philipp Kern wrote:

 Most of the non-free Debian Science / Med packages suffer from this in  
 some way.

Yes. :-(

 I've made some efforts to get non-free reactivated and at  
 least for powerpc it should be fixed now.

Great.

 We will try to add more  
 builders on other architectures to the set of non-free building  
 machines, if no unexpected events happen again (like there were the last  
 time we tried).

Thanks you for this service!  Do you think it makes sense just to wait
until phylip/armel and others might be builded?  This would enable me
doing some other work.

Thank you very much for your work on non-free autobuilders

Andreas.

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Bug#592306: debian-i18n: Upstream source translation information seems to lack Java support

2010-08-17 Thread Andreas Tille
Hi again,

as an additional note there is another form of translations missing from
the data you are providing.  The Qt way to do the translations which ends
up in files progname_lang.qm as the can for instance be found in
texmaker

  /usr/share/texmaker/texmaker_lang.qm

are also not covered by the data files you are providing at

  http://i18n.debian.net/material/data/

I'm a bit curious why I did not got any response from Nicolas who was
formerly wuite quick in responding?  Any information (preferably in
private) about reasons would be great to let me estimate a time frame
for tackling the reported problem.

Kind regards

   Andreas.

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Bug#592244: libvcl.so existing in both packages

2010-08-23 Thread Andreas Tille
On Sun, Aug 22, 2010 at 09:44:29PM +0200, Stig Sandbeck Mathisen wrote:
 I suggest we add Conflicts: headers for varnish-dev and libvxl1-dev
 against each other, as I do not like the idea of renaming any of the
 libraries.

There was recently a discussion on debian-de...@l.d.o[1] concerning a
similar case (bug #592242):  Simply using conflicts is nont policy
conform and should be avoided.  Please see the reasoning there.

Kind regards

   Andreas.

[1] http://lists.debian.org/debian-devel/2010/08/msg00314.html

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Bug#586243: education-desktop-sugar: please remove this package, it's outdated and confuses users

2010-06-28 Thread Andreas Tille
On Sat, Jun 26, 2010 at 01:06:15PM +, Sascha Silbe wrote:
 Excerpts from Omar Alejandro Silva's message of Thu Jun 17 17:42:26 + 
 2010:
  Accessing Sugar from desktop terminals or thinstations is important, please 
  don`t forget it while removing packages.
 education-desktop-sugar is a pure meta package, so removing it shouldn't 
 affect usage of Sugar with thin clients.

What is the problem in having pure metapackages?

Kind regards

Andreas.

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Bug#586243: education-desktop-sugar: please remove this package, it's outdated and confuses users

2010-06-28 Thread Andreas Tille
On Mon, Jun 28, 2010 at 01:35:56PM +0200, Sascha Silbe wrote:
 If someone cares about this package enough to maintain it, changing the
 description (to point out that it's LTSP + Sugar, not Sugar on a desktop)
 and updating the dependencies should be enough. But without an active
 maintainer removing the package is the best option and should be done
 ASAP.

Makes sense - thanks for the clarification

  Andreas.


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Bug#587856: ITP: debian-gis -- Set of Blends metapackages for Debian GIS

2010-07-02 Thread Andreas Tille
Package: wnpp
Severity: wishlist
Owner: Andreas Tille andr...@an3as.eu

* Package name: debian-gis
  Version : 0.0.1
  Upstream Author : Petter Reinholdtsen p...@debian.org, Andreas Tille 
ti...@debian.org
* URL : native package
* License : GPL
  Description : Set of Blends metapackages for Debian GIS

 The source package will create a set of metapackages for the different
 tasks defined by the Debian GIS project to support people working with
 Geographical Information Systems finding their stuff easily in the
 pool of Debian packages.  The metapackages should help the Debian GIS
 project to support their users better by simpler installation as well
 better documentation because the work of the project will be easily
 displayed by the Blends tools at
 http://blends.alioth.debian.org/gis/tasks/

The packaging of debian-gis is just prepared in the Blends SVN at
  svn://svn.debian.org/blends/projects/gis/trunk/

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Bug#590471: josm: missing images

2010-07-26 Thread Andreas Tille
Package: josm
Version: 0.0.svn3376-1
Severity: minor

Hi,

when starting Josm and quiting it immediately I get the following
error messages on console:


$ josm
Using /usr/lib/jvm/java-6-openjdk/bin/java to execute josm.
Debian-Release: 0.0.svn3376-1
Build-Date: 2010-07-18 15:51:31
Revision: 3376
Is-Local-Build: true

Fatal: failed to locate image 'service/fire_hydrant.png'. This is a serious 
configuration problem. JOSM will stop working.
Mappaint style standard icon service/fire_hydrant.png not found.
Fatal: failed to locate image 'fixme.png'. This is a serious configuration 
problem. JOSM will stop working.
Mappaint style standard icon fixme.png not found.
Fatal: failed to locate image 'fixme.png'. This is a serious configuration 
problem. JOSM will stop working.
Mappaint style standard icon fixme.png not found.


Kind regards and thanks for maintaining Josm

Andreas.


-- System Information:
Debian Release: squeeze/sid
  APT prefers stable
  APT policy: (500, 'stable')
Architecture: i386 (i686)

Kernel: Linux 2.6.18-xenU (SMP w/1 CPU core)
Locale: lang=de...@euro, lc_ctype=de...@euro (charmap=ISO-8859-15)
Shell: /bin/sh linked to /bin/bash



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Bug#590785: maxima: Please enable alternative pdf-viewer / postscript-viewer

2010-07-29 Thread Andreas Tille
Package: maxima
Severity: minor

Hi,

maxima recommends gv explicitely as pdf-viewer or postscript-viewer.
Please use

   pdf-viewer | gvor
   postscript-viewer | gv

depending of what type of documents will be really viewed.

The rationale is that people who install maxima will currently be forced
to install gv even if they do not want to.  For instance if you install
the education-mathematics package of Debian Edu which in principle
prefers okular you can not avoid installing gv without extra effort and
users become confused by more pdf-viewers / postscript-viewers than
needed.

Kind regards

 Andreas.

-- System Information:
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  APT prefers stable
  APT policy: (500, 'stable')
Architecture: i386 (i686)

Kernel: Linux 2.6.18-xenU (SMP w/1 CPU core)
Locale: lang=de...@euro, lc_ctype=de...@euro (charmap=ISO-8859-15)
Shell: /bin/sh linked to /bin/bash



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