Re: [need mentor] GSoC Proposal: Enhancement to Debian's BLAS/LAPACK Ecosys

2019-12-12 Thread Sébastien Villemot
GSoC2019, I introduced a blas/lapack runtime switch > > mechanism > >to Gentoo ( > > https://wiki.gentoo.org/wiki/Blas-lapack-switch > > ) > >which is to some extent similar to our update-alternatives. > > 3. currently I co-maintain a portion of blas/lapa

Re: updated vspline package data to upstream version 1.0.0

2020-04-04 Thread Sébastien Villemot
s can happen, since your package is in the main component of Debian (and not in contrib or non-free). Could you give more details about the warning message, and about the tool that displayed it? Thanks for your work, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ https://sebas

Re: OpenBlas Pthread issue with R

2020-04-30 Thread Sébastien Villemot
ckages libopenblas0-openmp and libopenblas0-serial). As a workaround, you can try to install one of these two (and adjust the BLAS alternatives accordingly). Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ https://sebastien.villemot.name ⠈⠳⣄ https://www.debian.org sign

Re: OpenBlas Pthread issue with R

2020-05-01 Thread Sébastien Villemot
applications compiled against Intel’s OpenMP, and we cannot do anything about that). So we should rather fix the bug that you encountered. -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ https://sebastien.villemot.name ⠈⠳⣄ https://www.debian.org signature.asc Description: This is a digitally signed message part

Re: [GSoC] BLAS/LAPACK Ecosystem Enhancement for Debian

2020-05-11 Thread Sébastien Villemot
iculty here is that libblas.so and libblas.so.3 live in different packages (-dev versus shared library). -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ https://sebastien.villemot.name ⠈⠳⣄ https://www.debian.org signature.asc Description: This is a digitally signed message part

Re: [GSoC] BLAS/LAPACK Ecosystem Enhancement for Debian

2020-05-11 Thread Sébastien Villemot
Le lundi 11 mai 2020 à 21:10 +0200, Sébastien Villemot a écrit : > Le mardi 12 mai 2020 à 01:48 +0800, Drew Parsons a écrit : > > 2b) A separate thing to look into is whether the alternative for > > libblas.so.3 can be slaved on to libblas.so (or vice versa) so they >

Re: RFR: build libjulia-openblas64 from src:openblas

2020-05-13 Thread Sébastien Villemot
.org/science-team/openblas/-/merge_requests/2 It looks good to me. I’ve merged your changes. You can go ahead with an upload if you will. Thanks, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ https://sebastien.villemot.name ⠈⠳⣄ https://www.debian.org signature.asc Descr

Re: OpenBlas Pthread issue with R

2020-05-28 Thread Sébastien Villemot
above. Can one of you open that bug, so that we can move the discussion there? Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ https://sebastien.villemot.name ⠈⠳⣄ https://www.debian.org signature.asc Description: This is a digitally signed message part

Re: Newbie OpenBLAS Packaging Question

2020-07-26 Thread Sébastien Villemot
anism, and not OpenBLAS (the libopenblas.so.0 -> > libopenblas-r0.3.8.so). The choice via the update-alternatives mechanism does not matter much at link time, as long as your are doing dynamic linking (and not static linking). It only matters at runtime. Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastie

octave-symbolic and sympy

2021-02-11 Thread Sébastien Villemot
than to have octave-symbolic. But if you have an idea how to fix the problem and have both in bullseye, that would be great. Best, ¹ https://bugs.debian.org/980707 -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ https://sebastien.villemot.name ⠈⠳⣄ https://www.debian.org

Re: double handling of BLAS alternatives: blas.so vs blas.so.3

2021-05-04 Thread Sébastien Villemot
e doing static linking, since that alternative also governs libblas.a. But we don’t use static linking much in Debian. And for someone who is doing static linking, the libblas.so.3 alternative is irrelevant anyways, so there is no risk of confusion. -- ⢀⣴⠾⠻⢶⣦⠀  Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁  Debian D

Re: GraphBLAS and SuiteSparse

2021-09-27 Thread Sébastien Villemot
ersion, and to only add the epoch on the libgraphblas5 binary package (this is technically possible, see e.g. gcc-defaults). And when libgraphblas bumps its SOVERSION (whichs happens quite frequently), then you will be able to drop the epoch and revert to a standard versioning scheme. --

Re: GraphBLAS and SuiteSparse

2021-10-02 Thread Sébastien Villemot
Le samedi 02 octobre 2021 à 11:06 +0200, Vincent Prat a écrit : > Le 27/09/2021 à 17:26, Sébastien Villemot a écrit : > > > > Le samedi 25 septembre 2021 à 17:57 +0200, Vincent Prat a écrit : > > > I recently started packaging python-suitesparse-graphblas [1], which is &

Re: GraphBLAS and SuiteSparse

2021-10-02 Thread Sébastien Villemot
Le samedi 02 octobre 2021 à 14:06 +0200, Vincent Prat a écrit : > Le 02/10/2021 à 13:17, Sébastien Villemot a écrit : > > Le samedi 02 octobre 2021 à 11:06 +0200, Vincent Prat a écrit : > > > Le 27/09/2021 à 17:26, Sébastien Villemot a écrit : > > > > Le samedi 2

Re: suitesparse-graphblas_6.0.0+dfsg-1_amd64.changes is NEW

2021-11-19 Thread Sébastien Villemot
ply to this email. > > > > [1]: https://ftp-master.debian.org/new.html > > or https://ftp-master.debian.org/backports-new.html for *-backports > > -- ⢀⣴⠾⠻⢶⣦⠀  Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁  Debian Developer ⢿⡄⠘⠷⠚⠋⠀  https://sebastien.villemot.name ⠈⠳⣄  https://www.debian.org signature.asc Description: This is a digitally signed message part

Re: suitesparse-graphblas_6.0.0+dfsg-1_amd64.changes ACCEPTED into unstable, unstable

2021-11-26 Thread Sébastien Villemot
o package currently builds against GraphBLAS, so this should not break stuff. What do you think? -- ⢀⣴⠾⠻⢶⣦⠀  Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁  Debian Developer ⢿⡄⠘⠷⠚⠋⠀  https://sebastien.villemot.name ⠈⠳⣄  https://www.debian.org signature.asc Description: This is a digitally signed message part

Re: suitesparse-graphblas_6.0.0+dfsg-1_amd64.changes ACCEPTED into unstable, unstable

2021-12-10 Thread Sébastien Villemot
lds against > > GraphBLAS, so this should not break stuff. What do you think? > I agree with you. Recommends is probably enough. I’ve added the Recommends in suitesparse 1:5.10.1+dfsg-4. Best, -- ⢀⣴⠾⠻⢶⣦⠀  Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁  Debian Developer ⢿⡄⠘⠷⠚⠋⠀  https://sebastien.villemot.na

Re: libsuitesparse-dev and libcholmod4

2023-06-09 Thread Sébastien Villemot
otherwise). I would be interested in hearing the opinion from others on this list who have more experience with this issue. Best wishes, ¹ https://github.com/DrTimothyAldenDavis/SuiteSparse/issues/177#issuecomment-1374828162 -- ⢀⣴⠾⠻⢶⣦⠀  Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁  Debian Developer ⢿⡄⠘⠷⠚⠋⠀  htt

Removing ATLAS?

2023-07-08 Thread Sébastien Villemot
/DebianScience/LinearAlgebraLibraries ² https://github.com/math-atlas/math-atlas/ -- ⢀⣴⠾⠻⢶⣦⠀  Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁  Debian Developer ⢿⡄⠘⠷⠚⠋⠀  https://sebastien.villemot.name ⠈⠳⣄  https://www.debian.org sebastien@coccia:~$ dak rm -nR atlas Will remove the following packages from unstable

Re: Removing ATLAS?

2023-07-13 Thread Sébastien Villemot
Le lundi 10 juillet 2023 à 22:01 +0200, Andreas Tille a écrit : > Hi Sébastian, > > Am Sat, Jul 08, 2023 at 10:01:15AM +0200 schrieb Sébastien Villemot: > > > > So, given all that, I’m inclined to (try to) remove atlas during the > > trixie development cycle. > &g

Re: Removing ATLAS?

2023-07-13 Thread Sébastien Villemot
e: liblapack.so only includes the Fortran routines, while the C interface is provided by the separate liblapacke.so). You can check this for yourself by running the following commands: $ objdump -T /usr/lib/x86_64-linux-gnu/libblas.so $ objdump -T /usr/lib/x86_64-linux-gnu/libcblas.so -- ⢀⣴⠾⠻⢶⣦⠀

Re: Removing ATLAS?

2023-07-13 Thread Sébastien Villemot
Le mercredi 12 juillet 2023 à 15:34 +0200, Rafael Laboissière a écrit : > * Sébastien Villemot [2023-07-08 10:01]: > > > As the maintainer of the atlas package over the last decade, I now > > wonder whether we should remove it from the archive. […] > Thanks for startin

Re: Removing ATLAS?

2023-11-05 Thread Sébastien Villemot
Le samedi 08 juillet 2023 à 10:01 +0200, Sébastien Villemot a écrit : > As the maintainer of the atlas package over the last decade, I now > wonder whether we should remove it from the archive. Since the present thread seems to indicate that there to be a consensus towards removing atla

Re: Removing ATLAS?

2023-11-24 Thread Sébastien Villemot
s the last fallback when none of the others are available. > This seems missing from the message draft. It is not necessary to mention libblas3 in Recommends because the Depends field normally already includes libblas.so.3 | libblas3. Hence libblas3 is already the last fallback. -- ⢀⣴⠾

Re: Removing ATLAS?

2023-11-24 Thread Sébastien Villemot
Le dimanche 05 novembre 2023 à 14:02 +0100, Sébastien Villemot a écrit : > Le samedi 08 juillet 2023 à 10:01 +0200, Sébastien Villemot a écrit : > > As the maintainer of the atlas package over the last decade, I now > > wonder whether we should remove it from the archive. > &

Re: Help for emmax needed (Was: Removing ATLAS?)

2023-12-22 Thread Sébastien Villemot
Control: tags -1 + patch Hi Andreas, Le mercredi 29 novembre 2023 à 10:06 +0100, Andreas Tille a écrit : > Control: tags -1 help > > Am Fri, Jul 14, 2023 at 01:40:22AM +0200 schrieb Sébastien Villemot: > > Le lundi 10 juillet 2023 à 22:01 +0200, Andreas Tille a écrit : > &

Re: build-depends on atlas, which is obsolete and scheduled for removal

2023-12-22 Thread Sébastien Villemot
mpleted the migration away from the old CLAPACK in clapack.patch. Only a minor cleanup was still needed to remove ATLAS. I opened a merge request that seems to do the job: https://salsa.debian.org/med-team/phast/-/merge_requests/1 Best, -- ⢀⣴⠾⠻⢶⣦⠀  Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁  Debian Developer ⢿⡄⠘⠷⠚⠋⠀  https://sebastien.villemot.name ⠈⠳⣄  https://www.debian.org signature.asc Description: This is a digitally signed message part

Re: Action needed for R-pkg Uploaders

2024-05-09 Thread Sébastien Villemot
Le lundi 11 mars 2024 à 15:47 +0100, Andreas Tille a écrit : > 1. Verify the list of packages whether you want to keep on working > on this/these package(s) (and if you have different e-mail > addresses please stick to only one) > Sébastien Villemot : > r-cran-bdsm

Re: Autobuild on a specific buildd machine ?

2013-10-03 Thread Sébastien Villemot
ou cannot specify the buildd yourself. However, buildd admins seem to have that power. So I guess the way forward is to write to debian-wb-team@l.d.o asking for a give back and explaining why it needs to happen on a specific buildd. -- .''`.Sébastien Villemot : :' :

Re: Proposal: Add blas.pc, lapack.pc pkg-config files for blas, atlas

2013-11-18 Thread Sébastien Villemot
(because of dependencies) - the other is libatlas.so: it perferctly makes sense to provide a distinct atlas.pc for that one, but it should be a distinct file, totally independent of blas.pc. -- .''`. Sébastien Villemot : :' :Debian Developer `. `' http://www.dynare.

Re: current status of mpi-default-dev for mpich/mpich2 arches (and scalapack in particular)

2014-03-04 Thread Sébastien Villemot
Le mardi 04 mars 2014 à 14:40 +0100, Michael Banck a écrit : > On Tue, Mar 04, 2014 at 02:37:28PM +0100, Sébastien Villemot wrote: > > Le mardi 04 mars 2014 à 13:18 +0100, Michael Banck a écrit : > > > cp2k FTBFS on s390x[1], because: > > > > > > 1. The c

Re: current status of mpi-default-dev for mpich/mpich2 arches (and scalapack in particular)

2014-03-04 Thread Sébastien Villemot
this problem. As long as mpich does not get renamed again in the foreseeable future, this may not be necessary. Cheers, -- .''`.Sébastien Villemot : :' :Debian Developer `. `' http://www.dynare.org/sebastien `- GPG Key: 4096R/381A7594 signature.asc Description: This is a digitally signed message part

Re: gfortran: handling binNMU for .mod file format change

2014-03-12 Thread Sébastien Villemot
forward, provided we reach some consensus on the right technical solution. All comments are therefore very welcome. Cheers, -- .''`.Sébastien Villemot : :' :Debian Developer `. `' http://www.dynare.org/sebastien `- GPG Key: 4096R/381A7594 signature.asc Description: This is a digitally signed message part

Re: gfortran: handling binNMU for .mod file format change

2014-03-24 Thread Sébastien Villemot
Le mercredi 12 mars 2014 à 18:44 +0100, Sébastien Villemot a écrit : > More specifically, I think that dh_fortran_mod should do the following: > > - it would read a file debian/[package.]fortran-mod, which would contain > a list of mod files created by gfortran and to be installed

Re: Re: Slicot in Debian

2014-04-23 Thread Sébastien Villemot
owever that my help would necessarily be limited, since I am not familiar with the math underlying slicot. Cheers, -- .''`.Sébastien Villemot : :' :Debian Developer `. `' http://www.dynare.org/sebastien `- GPG Key: 4096R/381A7594 signature.asc Description: This is a digitally signed message part

Re: transition: gfortran module version changing from 10 to 12

2014-05-07 Thread Sébastien Villemot
fix to #714730, but in the short term I guess we should manually generate the list of package to be rebuilt. I am willing to do that if agreed by the Release Team. -- .''`.Sébastien Villemot : :' :Debian Developer `. `' http://www.dynare.org/sebastien

Re: Bug#714730: gfortran: handling binNMU for .mod file format change

2014-05-07 Thread Sébastien Villemot
Le samedi 03 mai 2014 à 21:46 +0200, Tobias Burnus a écrit : > Matthias Klose wrote: > > Am 24.03.2014 18:46, schrieb Sébastien Villemot: > >> Le mercredi 12 mars 2014 à 18:44 +0100, Sébastien Villemot a écrit : > >>> More specifically, I think that dh_fortr

Re: Bug#714730: gfortran: handling binNMU for .mod file format change

2014-05-07 Thread Sébastien Villemot
od format (while it is the GCC version for C++). -- .''`. Sébastien Villemot : :' :Debian Developer `. `' http://www.dynare.org/sebastien `- GPG Key: 4096R/381A7594 signature.asc Description: This is a digitally signed message part

Re: transition: gfortran module version changing from 10 to 12

2014-05-16 Thread Sébastien Villemot
Le mercredi 07 mai 2014 à 15:51 +0200, Matthias Klose a écrit : > Am 07.05.2014 15:43, schrieb Sébastien Villemot: > > Le samedi 03 mai 2014 à 21:18 +0200, Matthias Klose a écrit : > >> Package: release.debian.org > >> > >> GCC 4.9 changes the module versi

Re: Bug#746805: transition: gfortran module version changing from 10 to 12

2014-06-12 Thread Sébastien Villemot
report which were the packages needing a binNMU, so the Release Team has all the necessary information for handling this transition. -- .''`.Sébastien Villemot : :' :Debian Developer `. `' http://www.dynare.org/sebastien `- GPG Key: 4096R/381A7594 signature.

Re: Bug#746805: transition: gfortran module version changing from 10 to 12

2014-06-21 Thread Sébastien Villemot
ase give back slepc? It failed to recompile because it build depends on petsc, which was not yet recompiled for the new Fortran. Thanks, -- .''`.Sébastien Villemot : :' :Debian Developer `. `' http://www.dynare.org/sebastien `- GPG Key: 4096R/381A7594 signature.asc Description: This is a digitally signed message part

Re: RFS: sagemath-database-graphs -- databases of graphs [already shipped package]

2015-02-08 Thread Sébastien Villemot
debian. It's part of the work for > sagemath in debian, and should only need a light review since I did > nothing fancy... Uploaded to unstable (I assumed this was your target distribution, despite the freeze, since the package has no rdep and a very low popcon). Thanks for your contrib

Bug#779152: ITP: r-cran-rsdmx -- GNU R package for the Statistical Data and Metadata Exchange (SDMX) framework

2015-02-24 Thread Sébastien Villemot
Package: wnpp Severity: wishlist Owner: "Sébastien Villemot" * Package name: r-cran-rsdmx Version : 0.4.5 Upstream Author : Emmanuel Blondel * URL : http://cran.r-project.org/web/packages/rsdmx/index.html * License : GPL-2+ Programming Lang: R D

Re: parmetis not in testing

2016-03-30 Thread Sébastien Villemot
want suitesparse to stay in main. So either 1) and 3). I'm personally indifferent between the two, because I'm not interested in non-free software. Cheers, -- .''`.Sébastien Villemot : :' :Debian Developer `. `' http://sebastien.villemot.name `- GPG Key: 4096R/381A7594 signature.asc Description: This is a digitally signed message part

Re: parmetis not in testing

2016-03-30 Thread Sébastien Villemot
Le mercredi 30 mars 2016 à 22:33 +0200, Sébastien Villemot a écrit : > Le mercredi 30 mars 2016 à 22:03 +0200, Wolfgang Fütterer a écrit : > > > > IMHO there are the following options to continue: > > > > 1) Removing suitesparse-metis from unstable > > > >

Re: building petsc 3.7.0: python can't pickle file objects

2016-05-13 Thread Sébastien Villemot
2. > Sébastien, are you available for updating superlu? No, sorry. -- .''`.Sébastien Villemot : :' :Debian Developer `. `' http://sebastien.villemot.name `- GPG Key: 4096R/381A7594

Re: Please categorise your packages for the Debian Science metapackages

2017-01-15 Thread Sébastien Villemot
Le mardi 10 janvier 2017 à 12:05 +0100, Andreas Tille a écrit : > > On Tue, Jan 10, 2017 at 11:29:14AM +0100, Sébastien Villemot wrote: > > If it is the former, it makes senses to remove r-base (+ octave and > > julia). But if it is the latter (and it is what I was implicitly &

Re: science-optimisation (Was: About the sense of removing -march=native)

2017-02-10 Thread Sébastien Villemot
f to make that change for buster. -- .''`.Sébastien Villemot : :' :Debian Developer `. `' http://sebastien.villemot.name `- GPG Key: 4096R/381A7594

Re: science-optimisation (Was: About the sense of removing -march=native)

2017-02-10 Thread Sébastien Villemot
apparently that build-profiles are meant to be compatible with reproducible builds (while by definition optimized-build are not reproducible across machines). Cheers, -- .''`.Sébastien Villemot : :' :Debian Developer `. `' http://sebastien.villemot.name `- GPG Key: 4096R/381A7594

Re: Sundials is way outdated

2017-02-11 Thread Sébastien Villemot
m > back > on, be my guest and revert that commit. Debian Policy §8.3: “The static library (libraryname.a) is usually provided in addition to the shared version.  It is placed into the development package.” Cheers, -- .''`.Sébastien Villemot : :' :Debian Developer `. `&#

Re: Sundials is way outdated

2017-02-14 Thread Sébastien Villemot
single shared library.” Looking at package names, shared libraries have different SOVERSIONs (0, 1 and 2 seem to be used). So it seems that this constraint is not fulfilled by sundials, though I am not sufficiently familiar with the package to make a definitive judgment. Cheers, -- .

Re: libsundials-dev

2017-05-28 Thread Sébastien Villemot
package for several dynamic libraries with different SOVERSIONs). The only benefit of splitting the -dev package is to save some disk space on developers' machines who don't need all the libraries. IMHO it is not worth the trouble (in comparison with the extra maintenance work and the overhead on Debian mirrors). -- .''`.Sébastien Villemot : :' :Debian Developer `. `' http://sebastien.villemot.name `- GPG Key: 4096R/381A7594

Re: tbb git?

2017-07-03 Thread Sébastien Villemot
dscs --debsnap". If the maintainer does not answer you then you may contact the MIA team in order to have the packaged orphaned. For more details, see: https://wiki.debian.org/Teams/MIA Since this process is likely to take time, you can also work on an NMU in the meantime. Cheers, --

Re: Bug#867382: ITP: vspline -- generic C++ code for uniform b-splines, remap functions

2017-07-14 Thread Sébastien Villemot
ively fork? Would you be interested in maintaining it (upstream and/or in Debian)? Cheers, -- ⢀⣴⠾⠻⢶⣦   Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁  Debian Developer ⢿⡄⠘⠷⠚⠋⠀  http://sebastien.villemot.name ⠈⠳⣄   http://www.debian.org

Re: libsundials-dev

2017-07-25 Thread Sébastien Villemot
hesitate to ask me. By the way, I see that there are now two sundials repositories on alioth (sundials.git and sundials_dima_kogan.git). Which one is the right one? Some clean-up would probably be warranted. Cheers, -- ⢀⣴⠾⠻⢶⣦ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org

Re: libsundials-dev

2017-07-25 Thread Sébastien Villemot
ense > just to drop octave build-depends on sundials (which should make your > life easier). No, the dependency on sundials that will be introduced in Octave 4.4 has to do with new functions introduced in the Octave interpreter (for solving ODEs). -- ⢀⣴⠾⠻⢶⣦   Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁  Debia

Re: mathic/mathicgb RC bugs -- sponsorship request

2017-08-06 Thread Sébastien Villemot
of the libraries Obviously, libmathicgb is underlinked. It misses at least a dependency on libmathic, and maybe more. Cheers, -- ⢀⣴⠾⠻⢶⣦   Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁  Debian Developer ⢿⡄⠘⠷⠚⠋⠀  http://sebastien.villemot.name ⠈⠳⣄   http://www.debian.org

Re: Bug#867382: ITP: vspline -- generic C++ code for uniform b-splines, remap functions

2017-08-07 Thread Sébastien Villemot
Le vendredi 04 août 2017 à 11:52 +0200, Kay F. Jahnke a écrit : > Am 14.07.2017 um 15:40 schrieb Sébastien Villemot: > > I am the maintainer of einspline in Debian (under the Debian Science > > umbrella). > > > > I am wondering what should be done with that pack

Re: Bug#867382: ITP: vspline -- generic C++ code for uniform b-splines, remap functions

2017-08-07 Thread Sébastien Villemot
Le lundi 07 août 2017 à 10:42 +0200, Sébastien Villemot a écrit : > Concerning vspline, I am of course willing to help you get it into > Debian. However, you should be aware that you are expected to do proper > ABI tracking of the library once it is packaged (see [1]; see also [2] > i

Re: mathic/mathicgb RC bugs -- sponsorship request

2017-08-13 Thread Sébastien Villemot
On Sat, Aug 12, 2017 at 06:39:00PM -0400, Doug Torrance wrote: > On 08/06/2017 07:02 AM, Sébastien Villemot wrote: > > Le vendredi 04 août 2017 à 21:47 -0400, Doug Torrance a écrit : > > > Would anyone be able to sponsor mathic and mathicgb? > > > > > > I&

Re: libsundials-dev

2017-08-18 Thread Sébastien Villemot
see the point of it). Hopefully it will pass NEW, and when it does, we can contact the Release Team for starting the transition. Thanks Dima, James and Andreas for your contribution to this update. -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villem

Re: Issue in numpydoc (Was: Further help needed for statsmodels)

2017-08-18 Thread Sébastien Villemot
issue had to do with a broken makefile rule for binary-indep. I also fixed a lintian error and the autopkgtest failure. However, this may not be the end of the story. Version 0.8.0-1 failed to build on several release archs, so we may have to deal with some additional portability issues, we’ll see.

Re: Issue in numpydoc (Was: Further help needed for statsmodels)

2017-08-19 Thread Sébastien Villemot
On Sat, Aug 19, 2017 at 10:09:31AM +0200, Andreas Tille wrote: > On Fri, Aug 18, 2017 at 11:19:26PM +0200, Sébastien Villemot wrote: > > > > > I just want to announce that I will not have time for any relevant > > > Debian work and that it would really help if somebody

Re: ITP: vspline -- generic C++ code for uniform b-splines, remap functions

2017-08-25 Thread Sébastien Villemot
endencies of vspline-dev + In the Vcs-Browser field, replace "/git/" by "/cgit/" + The indentation in the long description of vspline-dev is wrong. You can fix automatically it by running "cme fix dpkg" (after installing the libconfig-model-dpkg-perl package) Thanks for your work, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Re: Why does r-cran-rcppgsl not migrate to testing?

2017-09-02 Thread Sébastien Villemot
This is because of #861333 (essentially an ABI breakage). r-base is therefore prevented to migrate to testing, and since R packages have a tight dependency on the latest version of R, they cannot migrate either. Lots of R packages are currently stuck in unstable for that reason. Cheers, --

Re: Why does r-cran-rcppgsl not migrate to testing?

2017-09-06 Thread Sébastien Villemot
roblem, and my understanding is that the Release Team would be ready to schedule binNMUs once this is done. The difficult point is to deal with binNMU’d version number of reverse dependencies, which can differ across architectures. But this list can probably be generated by some smart query against

Re: ITP: vspline -- generic C++ code for uniform b-splines, remap functions

2017-09-09 Thread Sébastien Villemot
(note that you can use "dch --create" to recreate the changelog from scratch with the correct entry). Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Removing clapack?

2017-09-09 Thread Sébastien Villemot
, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Re: Removing clapack?

2017-09-09 Thread Sébastien Villemot
On Sat, Sep 09, 2017 at 09:28:23PM +0200, Sébastien Villemot wrote: > In the process of multi-archifying our BLAS and LAPACK packages (src:lapack, > src:atlas, src:openblas), I realized that there is now a src:clapack package > in > the archive, maintained by our team. > > The

Re: Removing clapack?

2017-09-09 Thread Sébastien Villemot
t rid of clapack. Best, > On Sat, Sep 09, 2017 at 09:55:59PM +0200, Sébastien Villemot wrote: > > On Sat, Sep 09, 2017 at 09:28:23PM +0200, Sébastien Villemot wrote: > > > > > In the process of multi-archifying our BLAS and LAPACK packages > > > (src:lapack, >

Re: Removing clapack?

2017-09-10 Thread Sébastien Villemot
On Sun, Sep 10, 2017 at 07:36:19AM +0200, Andreas Tille wrote: > On Sun, Sep 10, 2017 at 12:14:17AM +0200, Sébastien Villemot wrote: > > > > Since clapack and lapack provide exactly the same API and ABI, and actually > > exactly the same algorithms (the only difference

Re: ITP: vspline -- generic C++ code for uniform b-splines, remap functions

2017-09-10 Thread Sébastien Villemot
On Sun, Sep 10, 2017 at 10:43:48AM +0200, Kay F. Jahnke wrote: > Am 09.09.2017 um 13:26 schrieb Sébastien Villemot: > > Dear Kay, > > > > On Sat, Sep 09, 2017 at 12:46:39PM +0200, Kay F. Jahnke wrote: > > > > > I've started afresh in the way y

Re: Removing clapack?

2017-09-12 Thread Sébastien Villemot
On Tue, Sep 12, 2017 at 10:11:24AM +0200, Andreas Tille wrote: > PS: Feel free to ask for removal of clapack (or alternatively ask me to > do so) Thanks, done in #875564 (for sid) and #875565 (for stretch). -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀

Re: Bug #866601: RFS: segyio package is ready

2017-09-19 Thread Sébastien Villemot
that patches that you contribute will not be under a license suitable for upstream. So the recommended practice is to use the same license in the packaging as upstream, but in the last analysis this is your call. Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ h

Re: Upcoming new round of R package rebuilds [FWD: [Rd] R-devel object header changes that require reinstalling packages]

2017-09-20 Thread Sébastien Villemot
n ABI break, but this is a rather theoretical debate. In practice this proposed change does the job. Then the Release Team will schedule binNMUs for all R reverse dependencies, and everything will migrate to testing. Of course this means more rebuilds than strictly necessary, but who cares

Re: Bug #866601: RFS: segyio package is ready

2017-09-22 Thread Sébastien Villemot
ase push it there (note that I will be uploading what is in the git, not on mentors). I recommend that you create the git repository using: gbp import-dsc --pristine-tar segyio_.dsc Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.

Re: Bug #866601: RFS: segyio package is ready

2017-09-22 Thread Sébastien Villemot
don’t top-post :) Thanks for your work, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Re: Bug #866601: RFS: segyio package is ready

2017-09-22 Thread Sébastien Villemot
ese binaries are not the main product, but just a few auxiliary utilities, then segyio-bin is probably a good choice. -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Re: Bug #866601: RFS: segyio package is ready

2017-09-22 Thread Sébastien Villemot
should not be "1", but the upstream version in which the symbol appeared in Debian, which is "1.3.3". - in debian/copyright, the pycmake/ stanza contains a link to the LGPL text, not the GPL text - in debian/control, "section: libs" should be capitalized (&qu

Re: Bug #866601: RFS: segyio package is ready

2017-09-22 Thread Sébastien Villemot
load of ftpmasters. So please be patient. Future uploads won’t have to go through this, unless you introduce a new binary package. Thanks for your contribution to Debian, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.o

Re: Bug #866601: RFS: segyio package is ready

2017-09-22 Thread Sébastien Villemot
oth.debian.org (which is high traffic, because it gets the bug reports of all packages maintained by the team); or you can subscribe to segyio on http://tracker.debian.org (once it appears there, i.e. after your upload has been accepted). -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian

Re: r-api-3.4 (Was: Upcoming new round of R package rebuilds [FWD: [Rd] R-devel) object header changes that require reinstalling packages]

2017-09-24 Thread Sébastien Villemot
ully rebuilt? Done. I reopened #868558 and transformed it into a transition bug, with a request for rebuilds. -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Re: sponsor for trilinos 12.12.1 bump

2017-10-04 Thread Sébastien Villemot
; > Could anyone take it from here? I tried to compile from the git but it fails at the very beginning: find-netcdf.patch does not apply… Also note that I pushed a small change, so don't forget to git pull before working on it. Cheers, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debia

Re: How to deal with pandas

2017-10-04 Thread Sébastien Villemot
lution (I guess the debate is then about how broken they are). -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Re: How to deal with pandas

2017-10-04 Thread Sébastien Villemot
On Wed, Oct 04, 2017 at 03:52:56PM +0200, Sébastien Villemot wrote: > On Wed, Oct 04, 2017 at 03:43:00PM +0200, Anton Gladky wrote: > > > one more option is to drop pandas on those archs (filing > > RM bug) and fill the list of supported archs explicitly > > in d/con

Re: How to deal with pandas

2017-10-04 Thread Sébastien Villemot
On Wed, Oct 04, 2017 at 04:05:46PM +0200, Andreas Tille wrote: > On Wed, Oct 04, 2017 at 04:00:23PM +0200, Sébastien Villemot wrote: > > On Wed, Oct 04, 2017 at 03:52:56PM +0200, Sébastien Villemot wrote: > > > On Wed, Oct 04, 2017 at 03:43:00PM +0200, Anton Gladky wrote: >

Re: How to deal with pandas

2017-10-04 Thread Sébastien Villemot
On Wed, Oct 04, 2017 at 04:41:52PM +0200, Andreas Tille wrote: > On Wed, Oct 04, 2017 at 04:17:29PM +0200, Sébastien Villemot wrote: > > > > > > So who is going to file the RM bug? > > > > And the good news is that there is no dependency problem (even if it

Re: sponsor for trilinos 12.12.1 bump

2017-10-04 Thread Sébastien Villemot
p of a package that did not build in the first place, and that is not lintian clean either. This is clearly a waste of sponsors' time. Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Re: sponsor for trilinos 12.12.1 bump

2017-10-06 Thread Sébastien Villemot
ou can probably get access even as a non-DD), or someone else has to do it. I am leaving it here for now, because I only have the time for sponsorship, not for maintenance of the package. Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ ht

Re: sponsor for trilinos 12.12.1 bump

2017-10-06 Thread Sébastien Villemot
to sponsor your request. Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Re: Bug#868558: Would you please not upload new r-* packages until transition is finalised (Re: r-api-3.4)

2017-10-12 Thread Sébastien Villemot
act of the most recent uploads. This will soon be reflected in the tracker and various web pages. R-related uploads can therefore be resumed. Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc D

Re: Bug#868558: Would you please not upload new r-* packages until transition is finalised (Re: r-api-3.4)

2017-10-12 Thread Sébastien Villemot
On Thu, Oct 12, 2017 at 09:13:54AM -0500, Dirk Eddelbuettel wrote: > > On 12 October 2017 at 15:58, Sébastien Villemot wrote: > | Thanks Charles for explaining this. > | > | Actually the migration has already happened, thanks to the Release Team that > | took appropriate acti

Re: ITP: vspline -- generic C++ code for uniform b-splines, remap functions

2017-10-21 Thread Sébastien Villemot
Dear Kay, On Sat, Oct 21, 2017 at 11:59:04AM +0200, Kay F. Jahnke wrote: > Am 10.09.2017 um 14:13 schrieb Sébastien Villemot: > > > I uploaded your package. Note that it has to go through the so-called NEW > > queue, which means it is waiting manual processing by ftpmasters.

Re: Bus error on armhf (Was: Bug#877419: Bug#877700: RM: pandas [arm64 armel armhf mips mips64el mipsel s390x] ...)

2017-10-24 Thread Sébastien Villemot
lder? Could somebody > please have a look? If not the only chance I see is to deactivate armhf > for pandas. pandas is uncompiled on armhf, so this is not a blocker for testing migration. -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.

Re: Bus error on armhf (Was: Bug#877419: Bug#877700: RM: pandas [arm64 armel armhf mips mips64el mipsel s390x] ...)

2017-10-26 Thread Sébastien Villemot
On Thu, Oct 26, 2017 at 10:24:57AM +0200, Andreas Tille wrote: > On Tue, Oct 24, 2017 at 02:17:26PM +0200, Sébastien Villemot wrote: > > > (see build log[2]). My suspicion is that this is not really an error in > > > the test suite but some problem with the autobui

Re: DDs in Berlin for key signing?

2017-11-01 Thread Sébastien Villemot
ber of DDs who are offering key signing in various places (including Berlin): https://wiki.debian.org/Keysigning/Offers#DE Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Re: scilab: not O anymore?

2017-11-02 Thread Sébastien Villemot
ckage by several people (Gilles Filippini and Sébastien Villemot) > under the Debian Science Team umbrella. > > Finally the upstream homepage says 6.0.0 is out since february. > > So my questions are: > - is it O or not? > - who's working on packaging 6.0.0? > - is it

Re: ITP: vspline -- generic C++ code for uniform b-splines, remap functions

2017-11-18 Thread Sébastien Villemot
oad. Thanks for your contribution. Best, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Re: RFS: scram/0.16.0-1

2017-11-22 Thread Sébastien Villemot
and package is uploaded to mentors for review. I made the upload. I just added a fix for bug #871662. Thanks for your contribution, -- ⢀⣴⠾⠻⢶⣦⠀ Sébastien Villemot ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://sebastien.villemot.name ⠈⠳⣄ http://www.debian.org signature.asc Description: PGP signature

Re: ITP: vspline -- generic C++ code for uniform b-splines, remap functions

2017-11-22 Thread Sébastien Villemot
On Sun, Nov 19, 2017 at 08:48:52AM +0100, Kay F. Jahnke wrote: > Am 18.11.2017 um 14:10 schrieb Sébastien Villemot: > > On Sat, Nov 18, 2017 at 10:58:22AM +0100, Kay F. Jahnke wrote: > > > I also modified the lists of files to be installed, to reflect one added > > &

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