Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-10-03 Thread Michel Petitjean
Karl did an interesting remark. Yes, "circle", "distance", "equal", etc. are terms understood by everybody. But it often happened that mathematicians attribute definitions to terms used in a non math context. E.g., a circle is a set of points in the Euclidean plan lying at a given distance from a p

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-10-03 Thread karl javorszky
On the existence of the term "information" Let me pick up the the idea expressed by a colleague that "... in fact, such a thing as 'information' does not exist at all" (sorry, not a verbatim citation). This is in fact true. The idea can be better understood if one states: "such a thing as a 'circ

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-10-01 Thread Robin Faichney
Thursday, September 29, 2011, 11:11:36 AM, Michel wrote: > *** Karl: [Karl's last paragraph:] > As to the assertion of a colleague that the term "information" can not > be subject to a formal definition: if one wants to use a term in a > rational, logical discourse, then the term has to be define

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-29 Thread Pedro C. Marijuan
Dear Michel and FIS colleagues, Thanks for the excellent discussion, so far. The usual conspiracy of bureaucratic things around me have precluded my involvement in the important aspects dealt with (and cannot properly refer to the individual messages before). Anyhow, three short reflections fo

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-29 Thread Michel Petitjean
Thanks Loet, Karl, Gavin, and Robert, for your contributions. One of the main result of the debate is that, even when focussing on a specific field such as cheminformation, it is necessary to deal with physics, mathematics, sociology, and even with biology. That's ok with me: I like transdisciplina

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-28 Thread karl javorszky
, the selection environments for the variation > > (uncertainty) can then be specified as hypotheses. > > > > Best wishes, > > Loet > > > > > > -Original Message- > > From: fis-boun...@listas.unizar.es [mailto:fis-boun...@listas.uni

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-26 Thread Gavin Ritz
.unizar.es Subject: Re: [Fis] Chemical information: a field of fuzzy contours ? Dear FISers, I thank very much Robin, Xueshan, Stan, and Karl for their examples of information, that I summarized below: *** Robin: Of course, there is no "law" or formula that relates a bi

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-26 Thread Loet Leydesdorff
s] On Behalf Of Michel Petitjean Sent: Monday, September 26, 2011 1:39 PM To: fis@listas.unizar.es Subject: Re: [Fis] Chemical information: a field of fuzzy contours ? Dear FISers, I thank very much Robin, Xueshan, Stan, and Karl for their examples of information, that I summarized below: *** Robin

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-26 Thread Michel Petitjean
Dear FISers, I thank very much Robin, Xueshan, Stan, and Karl for their examples of information, that I summarized below: *** Robin: Of course, there is no "law" or formula that relates a bit of information to, say, quarks, spin, or whatever. These are different ways of looking at the same thin

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-26 Thread karl javorszky
Dear Colleagues, taking the risk of repeating an idea that has been advanced here in FIS a number of times, I'd like to offer answers to Michhel's questions: Michel: " Now, I ask you the following: please can you provide an extremely simple example (the most simple you could imagine) of situation

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-25 Thread Robin Faichney
Two replies in one message, to Michel and Gavin. I hope that this will count as my second in the week ending today, Sunday, so I have another two slots in the week beginning tomorrow, Monday. Saturday, September 24, 2011, 11:07:58 AM, Michel wrote: > Thanks also to Robin Faichney for the example

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-24 Thread Michel Petitjean
Dear FISers, Many thanks to Xueshan Yan for these three examples of cheminformation. I agree that among the various cheminformation concepts, some are technological. E.g., the Infonortics conferences (the 2011 one held in Barcelona: http://www.infonortics.com/call-11.html, http://www.haxel.com/ici

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-23 Thread Xueshan Yan
Dear Michel, It is very interesting for you telling us so many stories about the study of chemical information which took place in France and your university. As an information researcher, I once was invited to deliver a speech on Information Science at a meeting about chmoinformatics here a few

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-23 Thread Robin Faichney
Friday, September 23, 2011, 1:07:07 PM, Michel wrote: > Now, I ask you the following: please can you provide an extremely > simple example (the most simple you could imagine) of situation in > which you can say: << in this situation, information is ... >>. > Chemical information is welcome, but an

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-23 Thread Michel Petitjean
Dear FISers, Pedro raises several points. Among them: 1. "Chemoinformatics" or "Cheminformatics" ? Both terms are encountered. I would say that unless some authority takes a decision, both terms will continue to be used. 2. Despite I gave an example of what could be cheminformation in a concrete

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-22 Thread Pedro C. Marijuan
Dear Michel and FIS colleagues, Thanks for the very accurate Intro. I am reluctant to discuss about biological information right now, as there are other aspects you have dealt with that deserve further discussion. The story itself is funny: the way new fields of multidisciplinary origins have t

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-21 Thread Igor Gurevich
2011/9/16 Michel Petitjean : > Chemical information: a field of fuzzy contours ? > - > > Before turning to chemistry, I would recall some facts that I noticed > on the FIS forum: > although many people consider that a unifying definition of > informat

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-19 Thread Gordana Dodig-Crnkovic
x27;Michel Petitjean'; fis@listas.unizar.es Subject: Re: [Fis] Chemical information: a field of fuzzy contours ? Dear Michel, > Stating that information does not exist may be compared to stating that a > cloud does not exist: it is hard to define it rigorously and its frontiers &g

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-19 Thread Loet Leydesdorff
: fis-boun...@listas.unizar.es [mailto:fis-boun...@listas.unizar.es] On Behalf Of Michel Petitjean Sent: Monday, September 19, 2011 4:44 PM To: fis@listas.unizar.es Subject: Re: [Fis] Chemical information: a field of fuzzy contours ? Dear Loet, Thanks for your very good reply. Yes information cannot be fo

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-19 Thread Michel Petitjean
Dear Loet, Thanks for your very good reply. Yes information cannot be found as res extensa, justs as mathematics: mathematics exist in our head, and can be communicated, can be taught, etc., but do not exist as concrete objects. However, starting from data (and databanks), we can extract knowledge

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-19 Thread Loet Leydesdorff
Dear Michel, Ø Stating that information does not exist may be compared to stating that a cloud does not exist: it is hard to define it rigorously and its frontiers are highly fuzzy, but everybody is sure that it exists. The problem is here the “exist”. This easily lead to reification. For

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-19 Thread Michel Petitjean
ent: Monday, 19 September 2011 11:26 a.m. > To: joe.bren...@bluewin.ch > Cc: fis@listas.unizar.es > Subject: Re: [Fis] Chemical information: a field of fuzzy contours ? > > Hi there Joseph > > Can you show me where information is in chemistry? > > What part of chemis

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-18 Thread Gavin Ritz
...@listas.unizar.es] On Behalf Of joe.bren...@bluewin.ch Sent: Sunday, 18 September 2011 2:50 a.m. To: petitjean.chi...@gmail.com; fis@listas.unizar.es Subject: Re: [Fis] Chemical information: a field of fuzzy contours ? Dear Michel and FIS Colleagues, This will be an interesting discussion, since the

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-18 Thread Michel Petitjean
Dear Stan, I would not insert an 'organic realm' in the hierarchy: it is part of the chemical realm, but it is broader than expected. The rules of Organic Chemistry are not universal as the theorems of mathematics are: many exceptions exist, at least due to the existence of multifunctional compound

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-17 Thread Stanley N Salthe
Michel -- Organic chemistry was known to be the most difficult course in Columbia University. But I got interested in it, worked very hard constantly, and I achieved an 'A'. But what you say here indicates several orders of magnitude more difficulty than what I played with in university. For me

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-17 Thread Michel Petitjean
Dear Joe, dear FISErs, An organic chemist is able to predict a number of properties from the structural formula, including much about reactivity of the compound. But as you know, doing that properly is extremely difficult in a number of cases, because the rules governing reactivity are much more c

Re: [Fis] Chemical information: a field of fuzzy contours ?

2011-09-17 Thread joe.bren...@bluewin.ch
doing chemistry". Can this be captured by another system? Best wishes, Joseph Ursprüngliche Nachricht Von: petitjean.chi...@gmail.com Datum: 16.09.2011 09:44 An: Betreff: [Fis] Chemical information: a field of fuzzy contours ? Chemical information: a fie

[Fis] Chemical information: a field of fuzzy contours ?

2011-09-16 Thread Michel Petitjean
Chemical information: a field of fuzzy contours ? - Before turning to chemistry, I would recall some facts that I noticed on the FIS forum: although many people consider that a unifying definition of information science is possible (to be constructed