[galaxy-dev] Recovery of lost DRMAA job?

2014-03-25 Thread Brian Claywell
ends up happening in the Galaxy interface is that the history items turn green as if they completed successfully, but of course they're completely empty, which was a bit of a confusing thing for the user that was having this problem. Thanks! -- Brian Claywell, Systems Analyst/Programmer Fred

Re: [galaxy-dev] Finding cruft in database/files/?

2014-03-23 Thread Brian Claywell
, Dan On Mar 22, 2014, at 9:24 PM, Brian Claywell bclay...@fhcrc.org wrote: Is there an existing method for finding files in $GALAXY_DIR/database/files that have been orphaned due to errors, or leftover from testing, etc? I'm pretty sure ours is bigger than it ought to be, and I'd really like

[galaxy-dev] Finding cruft in database/files/?

2014-03-22 Thread Brian Claywell
. Thanks! -- Brian Claywell, Systems Analyst/Programmer Fred Hutchinson Cancer Research Center bclay...@fhcrc.org ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other

Re: [galaxy-dev] Persistent jobs in cluster queue even after canceling job in galaxy

2014-03-14 Thread Brian Claywell
-dist/stable so those of us that would prefer stable to bleeding-edge don't have to cherry-pick commits? -- Brian Claywell, Systems Analyst/Programmer Fred Hutchinson Cancer Research Center bclay...@fhcrc.org ___ Please keep all replies

Re: [galaxy-dev] slurm drmaaa

2014-03-11 Thread Brian Claywell
replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/ -- Brian

Re: [galaxy-dev] Persistent jobs in cluster queue even after canceling job in galaxy

2014-03-11 Thread Brian Claywell
/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/ -- Brian Claywell, Systems Analyst/Programmer Fred Hutchinson Cancer Research Center bclay...@fhcrc.org ___ Please keep all replies