Yes I can't get the file into galaxy at all. Am uploading from a file path. the
file is 35mb.
Musa
From: Ry4an Brase [ry4an+gal...@msi.umn.edu]
Sent: Tuesday, March 08, 2011 11:06 PM
To: Musa A. Hassan
Subject: Re: [galaxy-dev] divide fq into 2
On Tue, Ma
On Tue, Mar 08, 2011 at 03:46:13PM -0500, Bonci, Timothy Daniel wrote:
> I have an interactive applet that visualizes data produced by Galaxy.
> The applet, being run client side, does not have access to the file
> system of the server, so passing history files by reference (path)
> won't work. Al
On Tue, Mar 08, 2011 at 03:43:20PM -0500, Musa A. Hassan wrote:
> Hi All,
> Is there anyone out there who know how I can divide an fq file containing
> illumina short reads randomly into 2 small files contaning approximately
> equal number of reads? I have a huge fq from the illumina high-seq pla
I have an interactive applet that visualizes data produced by Galaxy. The
applet, being run client side, does not have access to the file system of the
server, so passing history files by reference (path) won't work. All the files
are available directly to the browser through a url, but I can'
Hi All,
Is there anyone out there who know how I can divide an fq file containing
illumina short reads randomly into 2 small files contaning approximately equal
number of reads? I have a huge fq from the illumina high-seq platform,
unfortunately, this file is huge and is causing all sorts of pro
Yes! The dynamic_options parameter looks to be just the thing I was looking
for! Many thanks for pointing it out as it is missing from the wiki.
-AR
-Original Message-
From: Hans-Rudolf Hotz [mailto:h...@fmi.ch]
Sent: Tuesday, March 08, 2011 3:56 AM
To: Rodriguez, Aaron (NIH/NCI) [C]
Hi Davide,
The summary_size is just the number of bins to aggregate the data over. It
can be greater than (end - start) because UCSC allows this, and so we allow
it too since we copy their method.
Kanwei
On Tue, Mar 8, 2011 at 2:23 AM, Davide Cittaro <
davide.citt...@ifom-ieo-campus.it> wrote:
Hi, is it just me or when I try to import a dataset from a library to a
history, annotation is not retained (whereas "info" is)?
d
/*
Davide Cittaro, PhD
Cogentech - Consortium for Genomic Technologies
via adamello, 16
20139 Milano
Italy
tel.: +39(02)574303007
e-mail: davide.citt...@ifom-ieo-ca
On 03/07/2011 10:58 PM, Rodriguez, Aaron (NIH/NCI) [C] wrote:
Hello all. First of all thanks to Galaxy developers and supporters for this
great tool -- I'm experimenting with adding my custom tools to galaxy and I'm
very impressed with how simple galaxy makes this process.
Some of the tool
