Hello,
In my tool UI, I have a select tool as follows:
param name=site type=select multiple=true label=Execution
Location help=Multi-select list - hold the appropriate key while clicking
to select multiple items
option value=localhostLocalhost/option
option
Great! Thanks.
On Wed, Feb 19, 2014 at 2:18 PM, Saket Choudhary sake...@gmail.com wrote:
Hi Ketan,
You can specify selected=true[1]
[1]
https://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax#A.3Coption.3E_tag_set
On 19 February 2014 20:14, Ketan Maheshwari ketancmaheshw
command template - eg something like:
python myscript.py $text_with_spaces $param2 $param3
Please confirm that this solves the problem?
On Tue, Feb 18, 2014 at 12:47 PM, Ketan Maheshwari
ketancmaheshw...@gmail.com wrote:
Hi,
My tool in galaxy accepts text argument which can have zero
Hi,
I am trying to set up Galaxy to interface with a Cray system which runs
Torque/PBS.
After reading this Galaxy wiki page:
https://wiki.galaxyproject.org/Admin/Config/Performance/Cluster#PBS
I was able to scramble torque egg with the following command:
you taken a look at galaxy's built-in parallelism framework? For a
great current example of a tool using this, look at Peter's NCBI BLAST+
wrappers. https://github.com/peterjc/galaxy_blast
-Dannon
On Thu, Feb 6, 2014 at 10:32 AM, Ketan Maheshwari
ketancmaheshw...@gmail.com wrote:
Hi
cool. I browsed the code but could not find the exact mechanism. Is the
parallelism at workflow level aka branch parallelism or is it at the tool
level that is the tool invokes parallel code?
Thanks,
Ketan
On Sun, Feb 9, 2014 at 7:50 PM, Ketan Maheshwari ke...@mcs.anl.gov wrote:
Thanks Dannon
how you would like to enhance
Galaxy - what it cannot do that you would like it to do - I or others
may be able to provide more specific ideas. Otherwise, sorry I have
not been or more help.
-John
On Tue, Feb 4, 2014 at 2:51 PM, Ketan Maheshwari ke...@mcs.anl.gov
wrote:
Hi
Hi,
While developing a tool, I am facing Cheetah code issue. I looked up the
mailing list archive and found many similar issues reported earlier but
could not debug this. Any tips in debugging is appreciated.
File cheetah_DynamicallyCompiledCheetahTemplate_1391530084_29_71368.py,
line 97, in
2014-02-04 Ketan Maheshwari ketancmaheshw...@gmail.com:
Hi,
While developing a tool, I am facing Cheetah code issue. I looked up the
mailing list archive and found many similar issues reported earlier but
could not debug this. Any tips in debugging is appreciated.
File
Hi,
This is a question I posted to galaxy user mailing list a while back and
was redirected to dev for possible answers:
Is it possible in Galaxy to design a tool whose sole purpose is to run
other tools. This is motivated by our desire to enhance execution
capabilities of existing tools via a
Hi,
This is a question I posted to galaxy user mailing list a while back and
was redirected to dev for possible answers:
Is it possible in Galaxy to design a tool whose sole purpose is to run
other tools. This is motivated by our desire to enhance execution
capabilities of existing tools via a
indexed data.
Thanks,
Ketan
On Tue, Jan 28, 2014 at 2:42 AM, Peter Cock p.j.a.c...@googlemail.comwrote:
On Tuesday, January 28, 2014, Ketan Maheshwari ketancmaheshw...@gmail.com
wrote:
Is there a data type in Galaxy that identifies executables uniquely, eg.
from the executable bit in the file
.
Were there any scenarios you had in mind that would lead to security
issues?
Thanks,
Ketan
On Tue, Jan 28, 2014 at 4:17 PM, Peter Cock p.j.a.c...@googlemail.comwrote:
On Tue, Jan 28, 2014 at 8:26 PM, Ketan Maheshwari ke...@mcs.anl.gov
wrote:
Is it possible to write a type file bin_or_exe
Is there a data type in Galaxy that identifies executables uniquely, eg.
from the executable bit in the file perms or some other way?
Thanks,
--
Ketan
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Please keep all replies on the list by using reply all
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to find the master), it seems like Swift could benefit from
having a Mesos based framework. Do you think it would enable you to have a
'zero-config' startup of a distributed Swift application?
Kyle
On Mon, Oct 28, 2013 at 1:51 PM, Ketan Maheshwari
ketancmaheshw...@gmail.com wrote:
Hi
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