Hi folks,
I'm attempting something that should be straightforward, but it's not. I
have a tool that runs a JAR file, which I have bundled with the tool. I
simply want to run the JAR file. And to paraphrase Thomas Edison, I've
tried several thousand things that do not work (at least for me), fro
.g2.bx.psu.edu/view/devteam/sam_merge
>
>
> --Dave B.
>
>
> On 2014-08-30 08:13, Lukasse, Pieter wrote:
>
>> Hi Melissa,
>>
>> See also
>>
>> https://toolshed.g2.bx.psu.edu/view/pieterlukasse/prims_masscomb
>> or
>> https://toolshed.g2.bx.
Hi folks,
I'm working on a tool that queries a database based on user input, where
this user input is a text parameter. The wildcard for the database is the
percent (%) character. The user input, which is ultimately translated into
the query, should be able to contain a % character. For example
2.bx.psu.edu/repos/galaxyp/dbbuilder
>
> Hope this helps.
>
> -John
>
> On Tue, Sep 9, 2014 at 10:08 PM, Melissa Cline wrote:
> > Hi folks,
> >
> > I'm working on a tool that queries a database based on user input, where
> > this user input is a text par
Hi Folks,
Okay, I really need debugging ideas on this one.
I have three repositories I'm developing under the test toolshed. They're
named start_xena, xena_import and xena_find_datasets (they're all under
visualization). start_xena contains a simple tool dependency to a package
named installXen
2062.94 Safari/537.36"
Just in case this is from some cruft from a previous installation, I tried
starting over with a brand new galaxy-dist directory. It doesn't look like
that changed anything.
Any ideas? Many thanks in advance!
Melissa
On Fri, Sep 12, 2014 at 10:30 AM, Dav
y installation, I started with a clean install today (including an
'hg update stable') and a clean shed_tools subdirectory.
I hope this helps. In the meantime, thanks, everyone for all of your help!
Melissa
On Fri, Sep 12, 2014 at 12:02 PM, Melissa Cline wrote:
> Thanks, folks! Eve
Hi Folks,
I suspect I know the answer to this question already, but I have to ask
just for the sake of completeness...
I'm working on a tool for which I'd like to query an external server for
the set of expected inputs, and then make that set available as input
options. The tool in question will
Hi folks,
We're working on developing a VM which we'd like to be tightly coordinated
with Galaxy, such that VM users can export data from the VM into Galaxy,
perform further analyses on that data, and then import the analysis results
into the VM for storage (from where it will serve additional app
Hi folks,
Hopefully this is a quick question. I'm working on a set of tools that
will fire off a VM from within Galaxy and will then communicate with the
VM. The VM will create a local database. The vision is that this won't be
a shared database; in a shared Galaxy instance, each user will have
, schrieb Melissa Cline:
>
> Hi folks,
>>
>> Hopefully this is a quick question. I'm working on a set of tools that
>> will fire off a VM from within Galaxy and will then communicate with the
>> VM. The VM will create a local database.
>>
>
> Are we talki
l reload/extend the existing database.
If we have access to the user name, and can create user-specific data
within one single database, that should address our needs.
Thanks!
Melissa
On Tue, Jun 17, 2014 at 12:32 PM, Björn Grüning
wrote:
> Hi,
>
> Am 17.06.2014 21:25, schrieb Meliss
Hi folks,
Quick question. When two different users use the same Galaxy instance
without logging in, how does Galaxy keep their identities straight, such
that when they come back to their computers the next day, they see only
their own workspace and not the other user's workspace?
Thanks!
Meliss
Hi folks,
A few days ago, I asked how Galaxy maintains its knowledge of the user,
even if the user hasn't logged in, such that two different anonymous users
see their respective histories (and not each other's) when they return to
Galaxy sometime later. I got the response that I was guessing I mi
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