Hi,
I'm trying to get data from UCSC table browser. However, the browser
always show "Waiting for main.g2.bx.psu.edu...". Is there any problem
with the galaxy server?
--
Regards,
Peng
___
The Galaxy User list should be used for the discussi
Sussed it. Need to login as user ubuntu. Sorry.
GE
On Thu, Dec 22, 2011 at 10:07 AM, Greg Edwards wrote:
> Greg,
>
> Thanks. All clear.
>
> It could be comforting for me to see a date stamp on that build number,
> just to know I am using a recent build. But I'm sure you're following
> normal pr
Greg,
Thanks. All clear.
It could be comforting for me to see a date stamp on that build number,
just to know I am using a recent build. But I'm sure you're following
normal practice.
When I fire up the Amazon Cloud service, using the recommended AMI
da58aab3 galaxy-cloudman-2011-03-22 (ami-)
t
Baohua and Jane,
As David noted, there is a Trinity wrapper for Galaxy, it works, and Trinity is
great.
However, Trinity is not enabled/installed on our public server (main.g2) or on
Galaxy cloud instances (Amazon) right now. You'll need a little programming
expertise to set up Trinity locall
Hello Greg,
Galaxy does not have versions as you'd find in commercial products. There is a
strict requirement that Galaxy provide reproducible behavior always, so any new
feature introduced into Galaxy (or any enhancement to an existing feature) must
not break any older feature that came befor
Hi folks,
I've researched this in the new global Google Search tool
http://galaxy.psu.edu/search/web/ but didn't see the answer I needed.
Is there actually a single "version" of Galaxy ? or is it a collection of
components with their own versions ?
Can that can be seen on or near the Main front
Hi Jane,
I have used Trinity on a local installation here at Bristol University. The
main reason its not on Galaxy main is because its very very memory intensive
(we run it on nodes with 256GB RAM). So you really need access to a big machine
to run it. Having said all that the output is astound
Ok I got past that part. I hadn't applied my rules :-(.
Now when I go to the public DNS it prompts me for a username and
password but it's not accepting the password I entered in the user
data. Any idea what went wrong?
Thanks again,
Greg
On Mon, Dec 19, 2011 at 2:24 PM, mailing list wrote:
Hello Efthymios,In case no one on this list answers, you may be able to get an answer to your question by contacting the owner of the velvetoptimiser repository. You can do this by selecting the "Contact repository owner" menu item on the View repository page.On Dec 20, 2011, at 4:02 AM, Makis Lad
Dear Galaxy Expert,
I would like to use Galaxy to de-novo assembly single-end read illumina
data (140bp) for plant transcriptomes (without reference). I remember
early emails mention trinity in Galaxy. But I could not see at Galaxy web
http://main.g2.bx.psu.edu/root
. Maybe it is installed in Ama
Dear Galaxy Expert,
I would like to use Galaxy to de-novo assembly single-end read illumina
data (140bp) for plant transcriptomes (without reference). I remember
early emails mention trinity in Galaxy. But I could not see it at Galaxy
web http://main.g2.bx.psu.edu/root. Maybe it is installed in A
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