Dear NCBI and Galaxy Team
I have sent a note to determine when the Megablast option will be
active again. Whether you use Galaxy or NCBI directly, it is
inoperative.
Scott
--
Core Laboratory Research Staff
Advanced Genome Technologies Core
Deep Sequencing (MPS) Facility
Vermont Cancer Cen
Dear Wayne
Here is the error message I get back.
Server Error
Your request could not be processed due to a problem on our Web
server. This could be a transient problem, please try the query again.
If it doesn't clear up within a reasonable period of time, e-mail a
short description of you
Hi Scott,
Could you clarify *which* Galaxy server you are using, and
*which* megablast tool within Galaxy? Most BLAST options
within Galaxy do NOT send the queries to the NCBI servers.
(1) Main Public Galaxy
I would guess you are using the main Galaxy Server, which
only has this megablast wrappe
Hello,
The Megablast htgs, nt, and wgs databases are in the process of being
updated to the latest NCBI releases and are expected to be available by
tomorrow morning (possibly sooner).
Should you wish to continue your analysis using the prior versions,
these are available through our rsync s
Hi Peter,
Thanks for clarifying all of this!
Main (usegalaxy.org) was restarted, perhaps why you encountered an
intermittent access delay. Let us know if are still unable to reach.
For the megablast issue over the weekend, we are updating the databases.
I replied to Scott's first galaxy-u...
Peter
Thank you for your detailed response and I should have noted that I was
using the Main Public Galaxy. Thank you for confirming that it is down!
I appreciate your input!
Scott
Scott Tighe
Senior Core Laboratory Research Staff
Advanced Genome Technologies Core
NextGen Sequencing/Flow Cyt
On Mon, Apr 28, 2014 at 9:01 PM, Scott Tighe wrote:
> Peter
>
> Thank you for your detailed response and I should have noted that I was
> using the Main Public Galaxy. Thank you for confirming that it is down!
>
> I appreciate your input!
>
> Scott
Hi Scott,
Galaxy is back for me now, and yes, t
Peter
Actually I was running blast separately and got error messages from them as
well and I assumed it was a connection problem But in fact it was two separate
problems unrelated. Good catch And thanks again
Scott
Vermont Cancer Center
Advanced Genome Techology Lab
On April 28, 2014 4:28:49
Hello, Scott,
The web blast service, including megablast, is functioning normally. I
don't know how Galaxy submits searches to us, but my guess is via our
blast URLAPI, which is also functioning well at the moment.
If your searches using our web page directly are also not working, please
send me
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