GPC Dev 5 Jan agenda and meeting notes

Happy New Year! What else for tomorrow? MCW is scheduled to scribe https://docs.google.com/document/d/1wwHZYjwKxj49aF_yZkAI-M2uiBiLnM8zovIxY64oFmc/edit agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. Zoom Meeting ID:

Re: GPC Dev 1 Dec agenda and meeting notes (hosted on Zoom)

Meeting ID: 954 5765 9561 Passcode: 357039<https://umsystemprotected.zoom.us/j/95457659561?pwd=TDg1dUZCbUFISDNqMFdqMUJsTjNDUT09> https://umsystemprotected.zoom.us/j/95457659561?pwd=TDg1dUZCbUFISDNqMFdqMUJsTjNDUT09 From: Dan Connolly Sent: Monday, November 30, 2

GPC Dev 1 Dec agenda and meeting notes (hosted on Zoom)

What else for tomorrow? MU is scheduled to scribe. https://docs.google.com/document/d/18Jobjx7fOekLcRhbC_1Ptx9hbB8DKSqfKCQ15xY50YQ/edit MU is also hosting the mailing list and teleconference now. new: gpcde...@po.missouri.edu https://po.missouri.edu/cgi-bin/wa?A0=GPCDEV-L old:

Re: gpc-dev 24 Nov agenda and meeting notes

old: http://listserv.kumc.edu/pipermail/gpc-dev/ -- Dan From: Dan Connolly Sent: Monday, November 23, 2020 11:24 AM To: gpc-dev@listserv.kumc.edu Subject: gpc-dev 24 Nov agenda and meeting notes What else for tomorrow? Intermountain is scheduled to scribe https

trailing blanks in SAS

Hi Susan, In our Nov 10 meeting when Alex reported struggles with trailing blanks in SAS, you offered to share some code. If you already sent it, I must have missed it. Help me find it? It's fine if what you have is not a complete solution. -- Dan

Canceled: GPC Dev Weekly Teleconference

:16010101T02 TZOFFSETFROM:-0600 TZOFFSETTO:-0500 RRULE:FREQ=YEARLY;INTERVAL=1;BYDAY=2SU;BYMONTH=3 END:DAYLIGHT END:VTIMEZONE BEGIN:VEVENT ORGANIZER;CN=Dan Connolly;SENT-BY="MAILTO:gpc-dev-boun...@listserv.kumc.edu": MAILTO:dconno...@kumc.edu ATTENDEE;ROLE=REQ-PARTICIPANT;PARTSTAT=NEEDS-ACTION;RSVP=T

GPC Dev Weekly Teleconference

:16010101T02 TZOFFSETFROM:-0600 TZOFFSETTO:-0500 RRULE:FREQ=YEARLY;INTERVAL=1;BYDAY=2SU;BYMONTH=3 END:DAYLIGHT END:VTIMEZONE BEGIN:VEVENT ORGANIZER;CN=Dan Connolly;SENT-BY="MAILTO:gpc-dev-boun...@listserv.kumc.edu": MAILTO:dconno...@kumc.edu ATTENDEE;ROLE=REQ-PARTICIPANT;PARTSTAT=NEEDS-ACTION;RS

gpc-dev 24 Nov agenda and meeting notes

What else for tomorrow? Intermountain is scheduled to scribe https://docs.google.com/document/d/1Tu6FdBmnJ-WjDo4DvfcfC2n1D3VhjJM0-glHbT_5ZI4/edit 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access code:

Fw: GPC Network Progress Report Feedback and Questions

Wow.. the mailing list widget really doesn't like you, does it, Steffani? Hm... it looks like you sent to gpc-dev-boun...@listserv.kumc.edu ; the normal place to send is gpc-dev@listserv.kumc.edu . Anyway... thanks for getting this info! -- Dan From: Roush,

gpc-dev 10 Nov agenda and meeting notes

Anything else for tomorrow? I'm planning to keep the meeting to 30 min. Indiana is scheduled to scribe. https://docs.google.com/document/d/1aOcJFV2fTl0HEgWAeY9neZnNQPR8hnW9QyxXaN92l9U/edit agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00

gpc-dev 3 Nov agenda and meeting notes

I didn't find much in the way of agenda; any suggestions? UTSW was scheduled to scribe Oct 27; are you available tomorrow? https://docs.google.com/document/d/1zd8YdaXoNB5-uc0l5Ky3fjUz7WWWZldeTb4yo7EHMNI/edit logistics: 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 20 Oct agenda and meeting notes

Let's do meet today. Please excuse the delay in preparing an agenda. I neglected to recruit a scribe last week. Next in rotation are UTHSCSA? UTSW? https://docs.google.com/document/d/18sWA9Z79pEvhM-xI6v_ryCb5_WvJjnVr4p4SR72yV3M/edit logistics: 1. Convene, take roll, review records and plan

large national cohort study that relates to COVID-19 in children, adolescents, and /or young adults.

Russ writes: Could you share on a gpc-dev call tomorrow to see how the network views responses to these questions. Basically not extensive analysis but a best estimate. It's not entirely clear to me what sites should estimate in tomorrow's call. patient counts? Or effort to collect the counts?

gpc-dev 13 Oct agenda and meeting notes

Anything else for tomorrow? Allina is scheduled to scribe. https://docs.google.com/document/d/11DNaadVc3Iv60ZPD53V4jQHDfrgIQCgmzqL7hucvGg0/edit agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 6 Oct agenda and meeting notes

What else for tomorrow? For reference, I cc'd Russ at his new MU address. UNMC is scheduled to scribe. https://docs.google.com/document/d/1Tab0znPmj8A6ecIjLGGleWkJWExXp9fF3H7VFJZG8C4/edit agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00

gpc-dev 29 Sep agenda and meeting notes

What else for today's meeting? KUMC is scheduled to scribe. https://docs.google.com/document/d/18XVjBZvbPuJSLl2GLuFhpk7XrCAFwX_-pEq5BqeSPIc/edit agenda snapshot, including the usual logistics details: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m.

gpc-dev 22 Sep agenda and meeting notes

What else for tomorrow? MCW is scheduled to scribe. https://docs.google.com/document/d/1pd1qChbJ4Hs2LWkh2V8YcsSzgyWIRjbtflNlvqYGvz8/edit current agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access

gpc-dev 15 Sep agenda and meeting notes

What else for tomorrow? Marshfield is scheduled to scribe. https://docs.google.com/document/d/1N3Z0coOHGrc1mXDodKpEWSzycBgtwxSuBiTlcznnrVs/edit current agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and

gpc-dev 8 Sep agenda and meeting notes

I trust you all enjoyed the holiday weekend. Input to today's agenda is welcome. UIOWA is scheduled to scribe. https://docs.google.com/document/d/1XU9-8SpOIXymFp1GOtwtIbEP_yQLnMj0ZPePe0pi63k/edit 1. Convene, take roll, review records, and plan the next meeting(s). * 11:00 a.m.

gpc-dev Sep 1 agenda and meeting notes

What else for today? I haven't spent much time looking for things that changed in the last week... -- Dan From: Dan Connolly Sent: Monday, August 24, 2020 3:39 PM To: gpc-dev@listserv.kumc.edu Subject: gpc-dev Aug 25 agenda and meeting notes What else

Re: [External] DROC 82 Tumor Table Mapping

It was semi-conscious. That is: I asked about it (July 7) and you said OK, but I doubt you realized the impact. Also noted as https://github.com/kumc-bmi/naaccr-tumor-data/issues/19 -- Dan

Re: PCORNet Tumor table

tabase properties file [default: db.properties] -- Dan From: mrkfw Sent: Thursday, August 27, 2020 9:52 AM To: Dan Connolly ; Mandhadi, Vasanthi (Medical Research Office) ; gpc-dev@listserv.kumc.edu Subject: Re: PCORNet Tumor table Hi, According to the “Ge

Re: PCORNet Tumor table

Yes, that's the right documentation and jar file*. Does the "Getting Started" section of the README make sense? *for the jar file, the commit hash is not part of its URL: https://github.com/kumc-bmi/naaccr-tumor-data/releases/download/v0.7.4/naaccr-tumor-data.jar -- Dan

gpc-dev Aug 25 agenda and meeting notes

What else for tomorrow? Intermountain is scheduled to scribe. https://docs.google.com/document/d/1D7AgAmKNSg249kunB7eVADsfH69YEqkajt3Cmsniorw/edit agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access

gpc-dev 28 Aug agenda and meeting notes

agenda is in progress Intermountain is scheduled to scribe https://docs.google.com/document/d/19fcbBd4xJsKH3mkkqyKDxYxpaN0OMI5x-yAPv34suag/edit 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 11 Aug agenda and meeting notes

Today's agenda is in progress; please excuse the delay. MU is scheduled to scribe. https://docs.google.com/document/d/1S9iKXo8nd-pe03qSrnqewLcgWlaWvPNeylVeo_hWOF4/edit 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and

Re: Follow up on the Data WG Meeting 7/17

Ah. OK. I understand now. From: Keith Marsolo Sent: Monday, August 3, 2020 1:19 PM To: Dan Connolly Cc: Mei Liu ; Russ Waitman ; gpc-dev@listserv.kumc.edu Subject: Re: Follow up on the Data WG Meeting 7/17 Hi Dan. The purpose of the lookup table is to handle

Re: Follow up on the Data WG Meeting 7/17

Hi Kieth and company, I think the concern here is that at a site like Intermountain, there are N lab systems, and building one normal range metadata table to rule them all is somewhere between a large engineering project and an open research project. Given that we already have

gpc-dev 21 July agenda and meeting notes

What else for tomorrow? UTHSCSA is scheduled to scribe https://docs.google.com/document/d/18NSOQU1dKCc6Hzv_-TpJQnNQ_TBo-zs5Af1AfXH051Y/edit 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access code:

SNOMED in Condition? for Bardet-Biedel Syndrome (BBS) Request [was: gpc-dev July 14 agenda]

From: Roush, Steffani Sent: Monday, July 13, 2020 12:42 PM To: Dan Connolly Subject: RE: gpc-dev July 14 agenda and meeting notes Hi Dan, Can you add something to the agenda for me? I would add it myself, but MCHS IS recently revoked my access to google

gpc-dev July 14 agenda and meeting notes

What else for tomorrow? UNMC is scheduled to scribe https://docs.google.com/document/d/1Bs0kkY7wI9SPZnmQBHEg9lfNDzuS-T2M_MJoT-aAajk/edit agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev Jul 6 agenda and meeting notes

What else for tomorrow? KUMC is scheduled to scribe. https://docs.google.com/document/d/1XE6aYYWS8eNhtlWCc_3y4kL9cd6KgwXIdJh74baRnZc/edit Agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access code:

Re: GPC Request #77, Dr. Brixner COVID Counts

Maren, I see UTSW submitted data for this. That's all I had pending on the gpc-dev agenda, so I'm leaving this off tomorrow's agenda unless I hear otherwise. -- Dan From: Gpc-dev on behalf of Maren Lowrance Sent: Tuesday, June 23, 2020 11:06 AM To:

gpc-dev 23 Jun agenda and meeting notes

Please excuse the delay; I was out yesterday. MCW is scheduled to scribe https://docs.google.com/document/d/1mZR0XvEh0JRZdff6avic9pqDsvyRyGVAVhmoqRTPKB0/edit 11:00 a.m. Central Time. ​Meeting ID and access code: 817-393-381; call +1 (571)

gpc-dev 9 Jun agenda and meeting notes

What else for tomorrow? I found just a few things but they seem worth a short meeting. Intermountain is scheduled to scribe https://docs.google.com/document/d/1LjxSYeJFeeAhdwNrzXAoACslKS6spEG_jItGScmt1fU/edit agenda snapshot: 1. Convene, take roll, review records and plan the next

gpc-dev 2 Jun agenda and meeting notes

What else for tomorrow? UIOWA is scheduled to scribe: https://docs.google.com/document/d/1b2YUTZdYvtAezYwZt_5ilbqvHTRFuMaYkmeouKAEb2Y/edit agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 25 May agenda and meeting notes

Welcome back from the holiday. As a result, I don't have a detailed agenda yet. Utah is scheduled to scribe https://docs.google.com/document/d/1NmbAFrlaiSfXSOPviTHUw1856SMpzQ-gbOreafc3wOk/edit 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central

KUMC COVID i2b2 & Data Informational Session (May 8, 2020)

FYI, some materials from a recent presentation at KUMC are available: * COVID Data Resources - KUMC Medical Informatics Thanks to Maren, Song, and Noor for

gpc-dev 19 May agenda and meeting notes

What else for tomorrow? MU is scheduled to scribe https://docs.google.com/document/d/1bjBEk9b9PdtZIu5zLW8sWWesVY6O-1M4tU4C8pZl_Sk/edit agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access code:

titles of COVID docs on imeetcentral from last week's notes

Steffani, help? I'm trying to clean up last week's notes. I'd like to make it clear which of these documents is what. Would you please give me the titles? (bonus point for date and author) https://pcornet.imeetcentral.com/pcornet20folderwziwldewodeymzc1xq/folder/WzIwLDEyNzY0MjQ5XQ/

gpc-dev 5 May agenda and meeting notes

What else for tomorrow? UTSW is scheduled to scribe https://docs.google.com/document/d/1g4i2VLsf-dwt2fzEbB3OhzgItqa0caVpdlh0M0ImO-o/edit agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access code:

Re: tumor table

Interesting... can you point us to the materials that the Cancer CRG developed? I'm still working with the design I shared March 19. https://informatics.gpcnetwork.org/trac/Project/attachment/ticket/749/tumor_data.sql I haven't worked on the duplicate issue but I included it in a list of

ACT Derived Variables: how?

Lav, did you and Maren just update our Covid ETL to handle the new ACT Derived Variables spreadsheet? How did we do it? Point me / us to the code or whatever? ref: gpc-dev 28 Apr agenda and meeting

gpc-dev 28 Apr agenda and meeting notes

What else for tomorrow? UTHSCSA is scheduled to scribe https://docs.google.com/document/d/10K5iZI7kLI3q8b89Khd74iQj29f2xq1UCrksKkpKzl0/edit agenda snapshot: 1. Convene, take roll, review records and plan the next meeting(s). * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 21 Apr agenda and meeing notes

What else for tomorrow? UNMC is scheduled to scribe https://docs.google.com/document/d/1IuLp9z_GWGGy2XnPsPhi6QzKsGZoPWwDIalPNWmdUUg/edit agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

CDM+ in May for COVID19? revised SOW

lies in writing. From: Russ Waitman Sent: Monday, April 20, 2020 8:47 AM To: Dan Connolly Subject: COVID CDM revised SOW COVID-19 Subset-CDM+_SOW.docx Description: COVID-19 Subset-CDM+_SOW.docx ___ Gpc-dev mailing list

Re: Date shifting for GROUSE

We don't require date shifting before you send your data; we just require that you tell us to what extent each patient's record has been shifted. details are in... #597 (spec for crosswalk to accompany i2b2 datamarts for GROUSE) cited

Re: De-id notes questions

a. yes, KUMC has an SOP for de-id clinical notes; we presented our adjudication process, a REDCap based regulatory review process at

gpc-dev 7 Apr agenda and meeting notes

What else for tomorrow? Allina is scheduled to scribe. https://docs.google.com/document/d/179Zx9pA7eaqdKGHFj7jXtUsGR32DDWWQeSNK7gxOd8I/edit# Agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev Mar 31 agenda and meeting notes

What else for tomorrow? MCW is scheduled to scribe. https://docs.google.com/document/d/1YUBJFrGgxGSyea9_XUi3e9NIAUSdT4cjxDNQl4OdHJ0/edit# agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 24 Mar agenda and meeting notes

I added the COVID-19 item, but otherwise, I propose pretty much the same agenda as last week. -- Dan From: Dan Connolly Sent: Monday, March 16, 2020 10:52 AM To: gpc-dev@listserv.kumc.edu Subject: gpc-dev 17 Mar agenda and meeting notes What else for tomorrow

toward 2x/week refresh for COVID-19 cohort

A lot of discussion has been going around; here's hoping I find time to summarize. Meanwhile, everybody is welcome to chime in by email here and in tomorrow's call. -- Dan ___ Gpc-dev mailing list Gpc-dev@listserv.kumc.edu

Canceled: GPC Dev Weekly Teleconference

BEGIN:VCALENDAR METHOD:CANCEL PRODID:Microsoft Exchange Server 2010 VERSION:2.0 BEGIN:VTIMEZONE TZID:Central Standard Time BEGIN:STANDARD DTSTART:16010101T02 TZOFFSETFROM:-0500 TZOFFSETTO:-0600 RRULE:FREQ=YEARLY;INTERVAL=1;BYDAY=1SU;BYMONTH=11 END:STANDARD BEGIN:DAYLIGHT

gpc-dev 17 Mar agenda and meeting notes

What else for tomorrow? I didn't find a lot, and none of it is urgent, so I welcome proposals to skip to next week. Intermountain is scheduled to scribe. If we skip to next week, are you available? If not, Allina? MCW?

gpc-dev 10 Mar agenda and meeting notes

Please excuse the delay; I got caught up in NAACCR development (#739) yesterday. Marshfield is scheduled to scribe https://docs.google.com/document/d/1-PbVjnSZ7berUFkI6iUfWbX7rC_YBH9jH_MmjvrDOZA/edit I'm just starting on the agenda...

gpc-dev 3 Mar agenda and meeting notes

What else for tomorrow? UIowa is scheduled to scribe. https://docs.google.com/document/d/1g688XbUyPledK84jEL9Ym0d9RVQ74dUmpqIv3QZOuPA/edit# agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 25 Feb agenda and meeting notes

What else for our meeting today? Utah is scheduled to scribe: https://docs.google.com/document/d/1rCc1rOxWV21LrVuJE8LLxOSdA2Aq1t_H3MyfiF1HSjc/edit agenda snapshot (please excuse the delay; I was home sick yesterday): 1. Convene, take roll, review records and plan next meeting(s) *

Re: Record Linkage/ Datavant work estimation

FYI, in the course of answering some questions as part of KUMC's security review, I started summarizing what I know about the PPRL project in a wiki page: https://informatics.gpcnetwork.org/trac/Project/wiki/PPRL From: Gpc-dev on behalf of Mandhadi, Vasanthi

18 Feb gpc-dev agenda and meeting notes

What else for tomorrow? IU is scheduled to scribe. https://docs.google.com/document/d/1pMTfnbjVmLaydjsSxJJIwpBhi9-GTUqczpqZhwP0sos/edit agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 11 Feb agenda and meeting notes

oops! I neglected to send this yesterday... What else for today's meeting? MU is scheduled to scribe https://docs.google.com/document/d/1mPEv7ScfeM8ElsxLSQf_BsqwsUUR3ycrOTTlJ_qHtUM/edit 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time.

Re: SSDMF updates

"As part of each HERON release (ideally, monthly) KUMC staff get recent weekly updates from NTIS and prepare and distributes a table of hashed data." -- https://informatics.gpcnetwork.org/trac/Project/wiki/DeathDataSharing From: Gpc-dev on behalf of Gryzlak,

gpc-dev 4 Feb agenda and meeting notes

What else for tomorrow? UTHSCSA is scheduled to scribe https://docs.google.com/document/d/1wzDdai4M45kusR_NTtLxlcNBn-Kz2FW5YZOh9IDwZz0/edit agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

Re: i2b2 on CDM, ACT integration

session, but we can see how it goes. From: Mazumder, Narayana Sent: Monday, February 3, 2020 9:20 AM To: Dan Connolly ; gpc-dev@listserv.kumc.edu Cc: Nathan Hensel ; Raj, Vino S ; Rodgers, Cassandra R Subject: RE: i2b2 on CDM, ACT integration Hi Dan, We

i2b2 on CDM, ACT integration

Russ and company had a conversation about non-CTSA hubs joining ACT. We've heard Narayana at Allina is working on i2b2 on CDM. Nathan here at KUMC is doing related work. We'd like to have a show and tell of progress in that area and brainstorm about integrating it with the ACT network. -- Dan

gpc-dev 28 Jan agenda and meeting notes

What else for tomorrow? UNMC is scheduled to scribe. https://docs.google.com/document/d/1Pw4UCDfVLyMG0ADnYSmvo_j96beCfmnNcDNWiPM8_YQ/edit agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 21 Jan agenda and meeting notes

What else for today's meeting? UTSW is scheduled to scribe https://docs.google.com/document/d/1GnzV370VxbLvDF4_F4Ej9NTU-kjwOQmoEwEIlQ1q2xU/edit# agenda snapshot (please excuse the delay; yesterday was a KUMC holiday to honor Dr. Martin Luther King): 1. Convene, take roll, review records

gpc-dev 14 Jan agenda and meeting notes

What else for tomorrow? KUMC is scheduled to scribe https://docs.google.com/document/d/1pcfwNwRdOsHUq5KHBtnaQqffD6Gn2RdTzUNJuzimAvI/edit# agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 7 Jan agenda and meeting notes

What else for tomorrow? Intermountain is scheduled to scribe https://docs.google.com/document/d/1oLHW-TbXAAEZrPVX1c6cAzw_9fc-zwJY0sudZqUWcoU/edit# agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 17 Dec agenda and meeting notes

What else for tomorrow? MCW is scheduled to scribe. https://docs.google.com/document/d/185CYDURwRRYPMhe32zXn1YgaCUKWyMmFDtxXKlyew60/edit# agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

Re: GPC DROC Feasibility Request #57

Does this merit discussion in tomorrow's gpc-dev meeting? Sravani, is KUMC done? From: Dan Connolly Sent: Monday, December 9, 2019 12:39 PM To: Maren Lowrance ; 'gpc-d...@listserv.kumc.edu' ; gpc-dev@listserv.kumc.edu Cc: han...@health.missouri.edu ; Sravani

Re: gpc-dev 10 agenda and meeting notes

Sigh. The bad guys have made it so difficult that the KUMC enterprise defences decided to encrypt the PDF copy of our meeting notes. https://docs.google.com/document/d/1aaWD6XFKNkMyG8YO3mjqG6b3tdBT5Zr42Q8D66SBtMU/edit ___ Gpc-dev mailing list

Canceled: GPC Dev Weekly Teleconference

BEGIN:VCALENDAR METHOD:CANCEL PRODID:Microsoft Exchange Server 2010 VERSION:2.0 BEGIN:VTIMEZONE TZID:Central Standard Time BEGIN:STANDARD DTSTART:16010101T02 TZOFFSETFROM:-0500 TZOFFSETTO:-0600 RRULE:FREQ=YEARLY;INTERVAL=1;BYDAY=1SU;BYMONTH=11 END:STANDARD BEGIN:DAYLIGHT

Canceled: GPC Dev Weekly Teleconference

BEGIN:VCALENDAR METHOD:CANCEL PRODID:Microsoft Exchange Server 2010 VERSION:2.0 BEGIN:VTIMEZONE TZID:Central Standard Time BEGIN:STANDARD DTSTART:16010101T02 TZOFFSETFROM:-0500 TZOFFSETTO:-0600 RRULE:FREQ=YEARLY;INTERVAL=1;BYDAY=1SU;BYMONTH=11 END:STANDARD BEGIN:DAYLIGHT

gpc-dev 10 agenda and meeting notes

Anything else for tomorrow? My usual scan didn't turn up much. 1. Convene, take roll, review records and plan next meeting(s) 11:00 a.m. Central Time. Meeting ID and access code: 817-393-381; call +1 (571) 317-3131 Allina is scheduled

Re: GPC DROC Feasibility Request #57

Sravani has been in touch with MU folks about technical issues. Jarrah, what news since "Will update group with new ETA status later today Dec 3"? From: Gpc-dev on behalf of Maren Lowrance Sent: Wednesday, November 13, 2019 11:16 AM To:

gpc-dev 3 Dec agenda and meeting notes

What else for tomorrow? UIowa is scheduled to scribe. https://docs.google.com/document/d/1OrEVmW6YfzbwK5sIU3ugue6_hJSq5KQVyQCm9s4ZZnI/edit agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 26 Nov agenda and meeting notes

What else for tomorrow? Marshfield is scheduled to scribe https://docs.google.com/document/d/150DTZLyEDR-PljEBUxnduCd3ljUNhjt0Jv76dopw12I/edit agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

gpc-dev 19 Nov agenda and meeting notes

What else for tomorrow? Utah is scheduled to scribe https://docs.google.com/document/d/1wa4QmQl8PE1zhcboUH7B25afgoRoMNVahr_L2Bv_cKE/edit# agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

Re: Adaptable: how to send death data? [was: gpc-dev weekly...]

m/document/d/1EDUyksQTDa7ZK96nCpIYUX6eU6j1O9dWvJ_nKNoRJb4/edit ________ From: Dan Connolly Sent: Tuesday, November 12, 2019 9:25 AM To: Mandhadi, Vasanthi (Medical Research Office) Cc: gpc-dev@listserv.kumc.edu Subject: Adaptable: how to send death data? [was: gp

Re: gpc-dev weekly: scribe for Nov 12? cancel Nov 5

7-3131 From: McNeeley, Todd Alexander Sent: Monday, November 4, 2019 9:41 AM To: Dan Connolly ; gpc-dev@listserv.kumc.edu Subject: RE: gpc-dev weekly: scribe for Nov 12? cancel Nov 5 MU can scribe on the Nov. 12th. From: Gpc-dev On Behalf Of Dan Connolly Sent: Monday, November 4, 2019 9

Adaptable: how to send death data? [was: gpc-dev weekly...]

From: Mandhadi, Vasanthi (Medical Research Office) Sent: Monday, November 11, 2019 1:02 PM To: Dan Connolly Subject: Re: gpc-dev weekly: scribe for Nov 12? cancel Nov 5 Hi Dan, Can you please add this to tomorrow’s agenda (Nov 12). Adaptable team requested

Canceled: GPC Dev Weekly Teleconference

BEGIN:VCALENDAR METHOD:CANCEL PRODID:Microsoft Exchange Server 2010 VERSION:2.0 BEGIN:VTIMEZONE TZID:Central Standard Time BEGIN:STANDARD DTSTART:16010101T02 TZOFFSETFROM:-0500 TZOFFSETTO:-0600 RRULE:FREQ=YEARLY;INTERVAL=1;BYDAY=1SU;BYMONTH=11 END:STANDARD BEGIN:DAYLIGHT

gpc-dev weekly: scribe for Nov 12? cancel Nov 5

MU, are you available to scribe next week? (Nov 12). In case they're not, how about you, Utah? I don't see enough business to merit a meeting tomorrow, so let's cancel. Congrats on getting CDM C7R1 approved, KUMC, MCW, MCRI, UNMC, UTHSCSA, MU, Utah, Allina, Intermountain. -- Dan

CDM C7R1 status at UIOWA, UTSW, IU?

Brian, Phillip, Jarrah, what's the current status at your site? *UIOWA: Approved 25 Oct, but will need to re-submit with values of FACILITY_ID populated for the BP Track study. * UTSW: (29 Oct): having challenges

gpc-dev 22 Oct agenda and meeting notes

What else for tomorrow? UTHSCSA is scheduled to scribe https://docs.google.com/document/d/1fPoDn0pdVvC-Mct58X7wkGD2rNiId8aNZ9JG_WCbcf4/edit agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

Re: Babel/ DROC 55 question

Do you have PortQuery installed? The "XML Message Stack" stuff is a little obscure. I can demo on Tuesday. PortQuery user directions 1. In the other i2b2 (i.e. babel): * Run a query. * Make sure debug mode is

gpc-dev 15 Oct agenda and meeting notes

What else for today's agenda? Sorry for the delay; I got distracted yesterday... UNMC is scheduled to scribe https://docs.google.com/document/d/1ClOGXUgtOMP4vxCkpRYXfufgkt4tKusPP1msSf7kzWc/edit Agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00

gpc-dev 8 Oct agenda and meeting notes

What else for tomorrow? UTSW is scheduled to scribe https://docs.google.com/document/d/1iGRtMHogyWSKreMcFEemSLX0VGqR5rc5jdEc5stcHKM/edit# agenda snapshot: Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

portable NAACCR ETL: is Docker close enough?

At the hackathon, I talked about goals for portable NAACCR ETL (#44). UTSW was very interested in the idea of a single jar file. As much as I'd like to do that, in keeping with sticking with just the i2b2 platform (JVM, JDBC, ant) my

HackathonSeven notes, in progress

Everybody is welcome to help take note or tweak them to clarify... https://docs.google.com/document/d/14290PkEf_Q_Q7hzodldUq51NviDCsG4NrPIWyLsJ9q8/edit# also linked from https://informatics.gpcnetwork.org/trac/Project/wiki/HackathonSeven#Records -- Dan

Re: Project Outcomes Associated with Medication

Several sites worked together on the Cancer RCR project where we looked at outcomes associated with medication using the CDM. For reference: #651 Load infusion data to CDM v 4.0 med_admin table and

gpc-dev 1 Oct agenda and meeting notes (Datavant demo)

etwork.org/trac/Project/wiki/HackathonSeven> is scheduled for October 2-3, 2019 in Kansas City * DataBuilder installation instructions OK? <http://listserv.kumc.edu/pipermail/gpc-dev/2019q3/005327.html> Dan Connolly Ref #335<https://informatics.gpcnetwork.org/trac/Project/ticket/335

Re: Data Quality Report - Cycle 6, Refresh 3 (July 2019)

Hi Susan, Russ tells me cell size restrictions went away along with date shifting in the revised statement of work. He suggests contacting DRN-OC for the revised regulatory documents. From: Gpc-dev on behalf of Susan Rea Sent: Tuesday, September 24, 2019

Re: [External] Re: How can I get access to babel.kumc.edu ?

at their site. What are you trying to do? Have you considered using ACT SHRINE? From: Gryzlak, Brian M Sent: Friday, September 27, 2019 1:51 PM To: Dan Connolly ; gpc-dev@listserv.kumc.edu Subject: RE: [External] Re: How can I get access to babel.kumc.edu

Re: How can I get access to babel.kumc.edu ?

The password request button at the top takes you to a page that says "To get a babel account, contact one of the account representatives (e.g. from your site)." I recently cleaned up the site account reps as part of

Re: [External] HASH_TOKEN and Datavant

Hi Brian, I expect all will be revealed next week (Oct 1) when DataVant does their demo / walthru. Jas, bonus points if you want to share anything by email in advance. -- Dan From: Gpc-dev on behalf of Gryzlak, Brian M Sent: Tuesday, September 24, 2019

DataBuilder installation instructions OK?

Yesh, You asked about DataBuilder installation documentation. Is the README good enough? For reference: DataBuilder 2157042460dc release,

Re: Lab Normal Value Processing

In our CDM, we don't seem to use normal ranges from individual results (yet) either; we us an age/sex adjusted table: https://github.com/kumc-bmi/i2p-transform/blob/db7cf8809d810385d2e6d4e4f1e66ac7cb02ed57/curated_data/labnormal.csv

gpc-dev 24 Sep agenda and meeting notes

What else for tomorrow? Intermountain is scheduled to scribe. https://docs.google.com/document/d/1NqHOoHZMnAKsrIh86ZFOZvBDViI2T84RfrOWHJ9pr0o/edit#

gpc-dev 17 Sep agenda and meeting notes

What else for tomorrow? MCW is scheduled to scribe https://docs.google.com/document/d/1BR0L8GPt-5qNn0tKonuZ0JVF8DNdvI0nYYWHykJ8OAo/edit# agenda snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00 a.m. Central Time. ​Meeting ID and access code:

  1   2   3   4   5   6   7   8   >