[R-SIG-Mac] Problems with Mac and X11.

2010-04-07 Thread steven mosher
I just downloaded the latest version of R for the MAC ( I have 10.5 ) and when I call pot routines I get errors on X11 libs. Any clue [[alternative HTML version deleted]] ___ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch

Re: [R-SIG-Mac] problems with X11 in R 2.11.0

2010-05-02 Thread steven mosher
I had the same Issue with 2.10.1. never got it resolved. I was hoping that 2.11 would fix it...alas On Thu, Apr 29, 2010 at 2:59 PM, Seth Schommer scschom...@gmail.com wrote: I installed R 2.11.0 today and immediately came across an issue I did not experience using version 2.10.1. For some

Re: [R-SIG-Mac] problems with X11 in R 2.11.0

2010-05-03 Thread steven mosher
I'll try that as libpng12.0.dylib is MIA on my system On Mon, May 3, 2010 at 10:00 AM, Payam Minoofar payam.minoo...@meissner.com wrote: Perhaps you can try Xquartz 2.5 from xquartz.macosforge.org and see if the updated X11 package works better. __ Payam Minoofar, Ph.D.

Re: [R-SIG-Mac] problems with X11 in R 2.11.0

2010-05-03 Thread steven mosher
- to build R from the sources against the software on your machine. On Sun, 2 May 2010, steven mosher wrote: I had the same Issue with 2.10.1. never got it resolved. I was hoping that 2.11 would fix it...alas On Thu, Apr 29, 2010 at 2:59 PM, Seth Schommer scschom...@gmail.com

Re: [R-SIG-Mac] Problem with X11

2010-05-03 Thread steven mosher
i've forwarded you the thread discussing this On Mon, May 3, 2010 at 11:02 AM, Anna Buschart anna_busch...@yahoo.dewrote: Dear R- and MacUsers, may be a totally disqualifying question, but I am stuck, because: I keep getting an Error about an X11 module, for example this: Error in png(file

Re: [R-SIG-Mac] problems with X11 in R 2.11.0

2010-05-03 Thread steven mosher
this (and it is not an R issue). I'd start by running the software updater - to build R from the sources against the software on your machine. On Sun, 2 May 2010, steven mosher wrote: I had the same Issue with 2.10.1. never got it resolved. I was hoping that 2.11 would fix it...alas On Thu

Re: [R-SIG-Mac] problems with X11 in R 2.11.0

2010-05-03 Thread steven mosher
Its currently not up to date as I just checked for updates. I'll try that now On Mon, May 3, 2010 at 12:46 PM, Simon Urbanek simon.urba...@r-project.orgwrote: On May 3, 2010, at 3:37 PM, steven mosher wrote: I have 10.5.8. I posted on this a while back. I also had version 36.. I

Re: [R-SIG-Mac] Fwd: [R] extracting a matched string using regexpr Possible BUG

2010-05-06 Thread steven mosher
Thanks David, After struggling with this bug for a day I think Im permanently dain bramaged. On Thu, May 6, 2010 at 3:54 AM, David Winsemius dwinsem...@comcast.netwrote: On May 6, 2010, at 2:21 AM, steven mosher wrote: see below, using a regex in sub() fails if the pattern is //d

[R-SIG-Mac] GUI gone

2010-05-15 Thread steven mosher
Hmm I did security updates to OS X 10.5.8, installed the latest R.11 And the GUI is gone? [[alternative HTML version deleted]] ___ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r-sig-mac

Re: [R-SIG-Mac] rgdal R2.11 on Snow Leopard

2010-05-16 Thread steven mosher
Did you ever have any luck with this. I've just installed GDAL complete 1.7dmg as well OS X 10.5.8 R11. On Sun, May 2, 2010 at 5:33 AM, Viscarra Rossel, Raphael (CLW, Black Mountain) raphael.viscarra-ros...@csiro.au wrote: Hello, I have just upgraded from R 2.9 to 2.11 on my macbook

Re: [R-SIG-Mac] [R] Trouble loading saved Rdata

2010-08-16 Thread steven mosher
Winsemius dwinsem...@comcast.netwrote: cross-posting to R-SIG-Mac On Aug 15, 2010, at 4:07 PM, steven mosher wrote: I think it came down to my actual program having a function that saved the objects it was passed with a .RData extension as opposed to .Rdata I guess you have figured out

[R-SIG-Mac] NetCDF and raster on MAC

2010-08-22 Thread steven mosher
I'm looking for some examples of how to read a NetCDF file with raster directly. The manual is a bit terse on the matter. The dats in question is a 3D (lon,lat,time) 72*36, 161 bands On the MAC I get a request to load RNetCDF, which is not available in Binary. I found a few mails on geting

Re: [R-SIG-Mac] NetCDF and raster on MAC

2010-08-23 Thread steven mosher
and installer from the GUI that I did have to exit and restart R to get the newer version of raster to attach properly.. or for sessionInfo() to report the proper version. On Mon, Aug 23, 2010 at 6:46 AM, Simon Urbanek simon.urba...@r-project.orgwrote: On Aug 22, 2010, at 3:14 PM, steven

[R-SIG-Mac] Weird package Installer behavior

2010-08-30 Thread steven mosher
I was having issues installing the latest version of ' raster' from CRAN. The behavior was that the repository showed a version 1.4-10 available. So I installed it using the GUI installer. In installed properly as 1.4-10. Then I switched to the package manager to load the package. The GUI for

Re: [R-SIG-Mac] Weird package Installer behavior

2010-08-30 Thread steven mosher
-wide (for all users) install of a new package, but it seems like the GUI (with your setup) always installs into the system-wide dir. Kasper On Mon, Aug 30, 2010 at 5:06 PM, steven mosher mosherste...@gmail.com wrote: I was having issues installing the latest version of ' raster' from CRAN

[R-SIG-Mac] stupid question on abline

2010-09-16 Thread steven mosher
I must be missing something very obvious data -ts(rnorm(120,0,1),start=1900,frequency=12) plot(data) abline(a=0,b=1) # draws nothing abline(a=0,b=0) #works abline(a=1,b=0) #works abline(a=0,b=.5) # doesnt work abline will only draw if b=0 sessionInfo() R version 2.11.1 (2010-05-31)

Re: [R-SIG-Mac] stupid question on abline

2010-09-16 Thread steven mosher
that abline only works for b = 0 as those were your only attempts that yielded a line within the plot frame. Steven McKinney From: r-sig-mac-boun...@stat.math.ethz.ch [ r-sig-mac-boun...@stat.math.ethz.ch] On Behalf Of steven mosher [ mosherste

Re: [R-SIG-Mac] config problems

2010-09-17 Thread steven mosher
:53 AM, steven mosher wrote: So, It appears that I have to install a compiler. Looking at Xcode the package that was available required an OS upgrade is Xcode the only option or is there another option I can use.. From the XCode download page you need to go to Developer Downloads

Re: [R-SIG-Mac] config problems

2010-09-17 Thread steven mosher
website: http://connect.apple.com/ then look under developer tools in the right hand column Thanks guys. On Fri, Sep 17, 2010 at 3:28 PM, Simon Urbanek simon.urba...@r-project.orgwrote: On Sep 17, 2010, at 5:53 PM, steven mosher wrote: I've come to the point where some of the packages I want

Re: [R-SIG-Mac] config problems

2010-09-18 Thread steven mosher
happy. Thanks Simon! On Sat, Sep 18, 2010 at 6:55 AM, Simon Urbanek simon.urba...@r-project.orgwrote: On Sep 17, 2010, at 10:55 PM, steven mosher wrote: Found this for future reference in case anybody else needs it Apple’s developer website only links to the latest version of Xcode, which

[R-SIG-Mac] upgrading libcurl on MAC for Rcurl

2010-09-18 Thread steven mosher
I recently installed RCurl on 10.5.8 (intel) and I had an old version of libcurl loaded 17.16.4 Since some curlOptions() were missing, I went about upgrading to libcurl to version 17.17.1-2. after reinstalling RCurl, I am still showing the old version of libcurl on the command curlVersion()

[R-SIG-Mac] R 2.12. killing X.11

2010-11-12 Thread steven mosher
I just installed R 2.12 on Mac (leopard) R version 2.12.0 (2010-10-15) Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) and the X11 app now quits on launch. Ideas? [[alternative HTML version deleted]] ___ R-SIG-Mac mailing list

Re: [R-SIG-Mac] R 2.12. killing X.11

2010-11-12 Thread steven mosher
Nevermind, installing system updates requires a re install of X11. Fixed. On Fri, Nov 12, 2010 at 11:33 AM, steven mosher mosherste...@gmail.comwrote: I just installed R 2.12 on Mac (leopard) R version 2.12.0 (2010-10-15) Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) and the X11 app

Re: [R-SIG-Mac] How to revert back to R 2.11

2010-11-14 Thread steven mosher
think MAC needs to be capitalized ... it's not an acronym ;-) On Fri, Nov 12, 2010 at 3:50 PM, steven mosher mosherste...@gmail.com wrote: I recently noticed that R was having memory race condition on my MAC. At start up it would race to 1.3GB of memory used. Just on start up

[R-SIG-Mac] memory race

2010-11-14 Thread steven mosher
I recently started getting what I can best describe as a memory race condition in my R ( OSX 10..5.8) It started a while back with R2.11, so I upgraded to 2.12 and have the same issue System Updates have been installed. Then 2.12 was installed. Updates for X11 installed. The phenomena appears

Re: [R-SIG-Mac] memory race

2010-11-14 Thread steven mosher
don't replicate this behaviour on my system, running OSX 10.6.5 and R 2.11.1. I also updated to R 2.12.0 and still failed to replicate the reported behaviour. On Sun, Nov 14, 2010 at 7:09 PM, steven mosher mosherste...@gmail.com wrote: I recently started getting what I can best describe

Re: [R-SIG-Mac] memory race

2010-11-14 Thread steven mosher
: _iconv_open Referenced from: /Library/Frameworks/R.framework/Resources/lib/i386/libR.dylib Expected in: /sw/lib/libiconv.2.dylib On Sun, Nov 14, 2010 at 5:41 PM, Steve Lianoglou mailinglist.honey...@gmail.com wrote: Hi, On Sun, Nov 14, 2010 at 6:09 PM, steven mosher mosherste...@gmail.com wrote

Re: [R-SIG-Mac] memory race

2010-11-14 Thread steven mosher
on. On Sun, Nov 14, 2010 at 9:30 PM, steven mosher mosherste...@gmail.com wrote: It sure looks like it is trying to access a file or something. The problem may have started when I was accessing some large files. is it possible there is a connection open I'm guessing not ... weird

Re: [R-SIG-Mac] R2.12 for Mac

2010-11-15 Thread steven mosher
111.1.5) /usr/lib/libiconv.2.dylib (compatibility version 7.0.0, current version 7.0.0) /usr/lib/libgcc_s.1.dylib (compatibility version 1.0.0, current version 1.0.0) On Mon, Nov 15, 2010 at 12:20 PM, Berend Hasselman b...@xs4all.nl wrote: On 15-11-2010, at 20:45, steven mosher

Re: [R-SIG-Mac] R2.12 for Mac

2010-11-15 Thread steven mosher
I found the offending file. .bashrc export PATH=$PATH:/sw/bin:sw/sbin:/usr/local/bin:usr/local/sbin:/usr/bin:usr/sbin:bin:sbin export DYLD_LIBRARY_PATH=/sw/lib:/usr/local/lib: export CURL_CONFIG=/sw/bin/curl-config When I was trying to get RCurl working this was suggested as the way to do it.

Re: [R-SIG-Mac] R2.12 for Mac

2010-11-15 Thread steven mosher
things to my system I read on random websites. Ok, that is a little tough, but you do realize this is all your own doing, right. Actually, it was advice I got here, But Ya. I'm suitably chastised Kasper On Mon, Nov 15, 2010 at 7:11 PM, steven mosher mosherste...@gmail.com wrote: I