[sage-devel] Sage 3.3 sources are out

2009-02-21 Thread mabshoff
Hello folks, the final 3.3 sources are out and now available at http://www.sagemath.org/src/ as well as some of the mirrors already (at least Seattle II, Boston, Germany and France since I personally pushed or pulled the update). Over 3.3.rc3 there were as expected very few merges: Merged

[sage-devel] Re: building sage-3.3 from source fails

2009-02-22 Thread mabshoff
On Feb 22, 5:49 am, Vincent Delecroix 20100.delecr...@gmail.com wrote: Hi, Hi Vincent, I try to compile the sage-3.3 sources on my : Linux iml88 2.6.11-6mdk #1 Tue Mar 22 16:04:32 CET 2005 i686 Intel(R) Pentium(R) 4 CPU 2.80GHz unknown GNU/Linux The m4ri tests fails due to Segmentation

[sage-devel] Re: building sage-3.3 from source fails

2009-02-22 Thread mabshoff
On Feb 22, 5:57 am, mabshoff mabsh...@googlemail.com wrote: On Feb 22, 5:49 am, Vincent Delecroix 20100.delecr...@gmail.com wrote: SNIP libm4ri testsuite failed, please report upstream! sage: An error occurred while installing libm4ri-20090128 We need more context, i.e gzip

[sage-devel] Re: building sage-3.3 from source fails

2009-02-22 Thread mabshoff
On Feb 22, 9:37 am, Vincent Delecroix 20100.delecr...@gmail.com wrote: Hi Michael, Hi Vincent, It will be hard to have a sane gcc on my Mandriva. I built gcc 3.4.6 without any error but I get an error during tests. make -k check [...] make[3]: Entering directory

[sage-devel] Re: building sage-3.3 from source fails

2009-02-22 Thread mabshoff
On Feb 22, 10:07 am, Vincent Delecroix 20100.delecr...@gmail.com wrote: Hi Vincent, Hmm, something strange is going on here. I am surprised boehmgc runs make check, but it isn't a good sign. I launch myself the make check. That's not a part of the compilation (If it's what your

[sage-devel] Re: Harmonic numbers and Stirling numbers

2009-02-22 Thread mabshoff
On Feb 21, 7:58 am, Fredrik Johansson fredrik.johans...@gmail.com wrote: Hi, Hi Fredrik, Looking around, it seems Sage does not yet implement harmonic numbers (except via SymPy)? If anyone is interested, I benchmarked a few different algorithms and blogged about it

[sage-devel] Re: sage package construction howto ?

2009-02-22 Thread mabshoff
On Feb 22, 12:18 pm, Bernie brych...@gmail.com wrote: Hi Bernie, Hi! If not so much problem can anybody tell me how to fix this problems? I'm trying to add some structures as Vincent did, but all my problems are still here after some hours of work :-( I did something similar to

[sage-devel] Re: Sage malloc

2009-02-22 Thread mabshoff
On Feb 22, 2:19 pm, Georg S. Weber georgswe...@googlemail.com wrote: Hi sage-devel, Hi, currently Sage uses, if possible, the system's malloc. This has a big advantage --- that strategy certainly is the one supporting portability of Sage best. I don't know if there is a timeline already

[sage-devel] Re: Sage malloc

2009-02-22 Thread mabshoff
On Feb 22, 2:34 pm, mabshoff mabsh...@googlemail.com wrote: On Feb 22, 2:19 pm, Georg S. Weber georgswe...@googlemail.com wrote: Hi sage-devel, Hi, currently Sage uses, if possible, the system's malloc. This has a big advantage --- that strategy certainly is the one supporting

[sage-devel] Re: Sage malloc

2009-02-22 Thread mabshoff
On Feb 22, 10:01 pm, Georg S. Weber georgswe...@googlemail.com wrote: C'mon, Hi Georg, this does need a very thorough doctesting on as many architectures as possible! My own overnight run with Sage 3.3 with additionally #5344 and #4181 applied has finished: {{{

[sage-devel] Re: Sage 3.3 sources are out

2009-02-22 Thread mabshoff
On Feb 22, 11:16 pm, Jan Groenewald j...@aims.ac.za wrote: Hi Hi Jan, On Sat, Feb 21, 2009 at 10:39:52PM -0800, mabshoff wrote: the final 3.3 sources are out and now available at    http://www.sagemath.org/src/ On a P4 with Ubuntu 8.04.2 with gcc 4.2.3-1ubuntu6 and texlive-common

[sage-devel] Re: building sage-3.3 from source fails

2009-02-22 Thread mabshoff
On Feb 22, 4:08 pm, Vincent Delecroix 20100.delecr...@gmail.com wrote: Hi, hi Vincent, Even with gcc-3.4.6 the compilation fails exactly at the same point (with exactly the same errors). I will ask help tomorrow from the network engineer. Ok, it appears to me that the overly aggressive

[sage-devel] Re: Sage 3.3 sources are out

2009-02-23 Thread mabshoff
On Feb 23, 12:00 am, Jan Groenewald j...@aims.ac.za wrote: Hi Hi Jan, On Sun, Feb 22, 2009 at 11:39:47PM -0800, mabshoff wrote: As I did make html for the docs in sage-devel/doc, I got this error:http://users.aims.ac.za/~jan/make_doc_error.log My guess would be you need to install

[sage-devel] Re: Sage malloc

2009-02-23 Thread mabshoff
On Feb 23, 12:44 am, Georg S. Weber georgswe...@googlemail.com wrote: On 23 Feb., 08:10, mabshoff mabsh...@googlemail.com wrote: Hi Georg, We definitely *are* closing in on this devious bunch of bugs. I had touched four Cython files (the ones noted in that other recent Singular thread

[sage-devel] Re: Windows Sage Project

2009-02-23 Thread mabshoff
On Feb 23, 3:31 am, ahmet alper parker aapar...@gmail.com wrote: Hi, If you need visual studio 2008, I have one, which is purchased by my university. The Sage project has several MSVC 2008 Professional licenses donated by Microsoft Research for the port, so we are good. The point William

[sage-devel] Re: Windows Sage Project

2009-02-23 Thread mabshoff
On Feb 23, 3:37 am, Kenny masso.ke...@gmail.com wrote: Hi Rob, There is no need for a window$ server... don't waste your time in such a bad way... it is easy to use the wmplayer and the image that the sage team provides from the website. There are *plenty* of reasons to do a native

[sage-devel] Re: Sage malloc

2009-02-23 Thread mabshoff
Hi Georg, here is the result of Sage 3.3 + your spkg patch for 64 bit. This is compiled using --with-malloc=system: sage -t devel/sage/sage/calculus/calculus.py # 0 doctests failed sage -t devel/sage/sage/crypto/mq/sr.py # Segfault sage -t

[sage-devel] Re: pexpect problem.

2009-02-23 Thread mabshoff
On Feb 21, 1:54 am, Florent Hivert florent.hiv...@univ-rouen.fr wrote:       Dear all, Hi Florent, It seems that I'm having a pexpect problem on my computation server. Maybe you already know that but it is not deterministic, ie doctest hangs in some more or less randomly chosen file. I've

[sage-devel] Re: make check mit Singular-3-1-0 und sage-3.3

2009-02-23 Thread mabshoff
On Feb 23, 5:41 am, Martin Albrecht m...@informatik.uni-bremen.de wrote: Simon reported this doctest failure with his custom Singular 3-1-0 and sage-3.3: Hi, File /home/king/SAGE/devel/sage-3.2.3/devel/sage/sage/interfaces/singular.py , line 116:     sage: I2 Expected:    

[sage-devel] Re: Windows Sage Project

2009-02-23 Thread mabshoff
On Feb 23, 5:16 am, ahmet alper parker aapar...@gmail.com wrote: Hi, I think one of the main idea behind developing a real alternative for Magma, Matlab, Mathematica etc. is their license costs and restrictions on altering the source code etc. Personally, if I had chance to not to use

[sage-devel] Re: Sage server for many students...

2009-02-23 Thread mabshoff
On Feb 23, 6:10 am, Thierry Dumont tdum...@math.univ-lyon1.fr wrote: Hi Thiery,  After many months waiting for computers, I am now ready to start an installation of Sage for all the undergraduate students of my University. Nice. We will have a maximum of about 250 simultaneous

[sage-devel] Re: Sage server for many students...

2009-02-23 Thread mabshoff
On Feb 23, 7:04 am, Thierry Dumont tdum...@math.univ-lyon1.fr wrote: mabshoff a écrit : Hi Thierry, In general there are a bunch of suggestions like setting timeouts for the python processes and so on to avoid overloading the server. Do you have any more info about the setup, i.e

[sage-devel] Re: Windows Sage Project

2009-02-23 Thread mabshoff
On Feb 23, 7:41 am, ahmet alper parker aapar...@gmail.com wrote: Hi, The article was:http://thebetaguy.com/exclusives/?postid=1029344029 I am not sure about it's technical correctness.. AAP Thanks for the link. Note that the article was posted on Thursday, April 03, 2008 - I thought maybe

[sage-devel] Re: Windows Sage Project

2009-02-23 Thread mabshoff
On Feb 23, 7:45 am, kcrisman kcris...@gmail.com wrote: Hi, Just FYI, there is a miniscule typo onhttp://wiki.sagemath.org/windows/msvc64-issues insofar as it refers to the 32-bit port. This is correct since for now we are doing 32 bits only, at least from my end which is complementary to

[sage-devel] Re: Windows Sage Project

2009-02-23 Thread mabshoff
On Feb 23, 7:52 am, Alfredo Portes doyenatc...@gmail.com wrote: Hi Alfredo, On Mon, Feb 23, 2009 at 10:46 AM, mabshoff mabsh...@googlemail.com wrote: Anyway, that was a little less than a year ago and I have so far heard zero complaints about Windows 7 breaking the binary API of code

[sage-devel] Re: Notebook editing and interactive plotting (jquery?)

2009-02-23 Thread mabshoff
On Feb 23, 9:00 am, Jason Grout jason-s...@creativetrax.com wrote: Kenny wrote: Is there any good reason for using flotr, protochart or any other instead of flot?? I don't know.  In order to standardize on flot or anything else, though, someone needs to post a message to sage-devel

[sage-devel] Re: Windows Sage Project

2009-02-23 Thread mabshoff
On Feb 23, 9:37 am, Tim Lahey tim.la...@gmail.com wrote: On Feb 23, 2009, at 12:32 PM, Blair wrote: My last name is Sutton and my trac id is bsutton. I don't mind using Mercurial. I hope it has an interface similar to Tortoise SVN. How long would it take to set up the repository with

[sage-devel] Re: Sage malloc

2009-02-23 Thread mabshoff
On Feb 23, 4:42 am, mabshoff mabsh...@googlemail.com wrote: Hi Georg, here is the result of Sage 3.3 + your spkg patch for 64 bit. This is compiled using --with-malloc=system: Ok, it turns out the failures I listed here are caused by oMalloc, but they are not caused by Georg's patch

[sage-devel] Re: Sage 3.3 sources are out

2009-02-23 Thread mabshoff
On Feb 23, 10:42 am, kcrisman kcris...@gmail.com wrote: Hi, Upgraded from 3.3.rc2 more or less successfully.  But: Upon restarting, got 3.3 banner but then immediate ImportError SNIP Just FYI in case this helps track down something else which you've been noticing. I can also reproduce

[sage-devel] Re: sage 3.3 FTBFS with g++ 3.3

2009-02-23 Thread mabshoff
On Feb 23, 3:07 pm, Ondrej Certik ond...@certik.cz wrote: Hi, is Sage supposed to build with g++ 3.3? No, it needs gcc 3.4 or higher due to the requirement for C99 support. There is a ticket to move the check from the FLINT.spkg to the start of Sage, but no one has done that yet. And who

[sage-devel] Re: spkg dependencies

2009-02-23 Thread mabshoff
On Feb 23, 3:08 pm, Ondrej Certik ond...@certik.cz wrote: Hi, Hi, I was trying to find if it was discussed before, but didn't find anything -- what is your view on spkg dependencies? It is not that bad so far, but still I need to remember in which order to install all my aditional

[sage-devel] Re: savefig from pylab in 3.3

2009-02-23 Thread mabshoff
On Feb 23, 9:25 pm, William Stein wst...@gmail.com wrote: On Mon, Feb 23, 2009 at 9:22 PM, mark mcclure mcmcc...@unca.edu wrote: SNIP My recollection is hazy, but I strongly suspect the very issue you posted about was a problem in some of the rc* releases caused by upgrading matplotlib

[sage-devel] Re: Sage 3.3 sources are out

2009-02-23 Thread mabshoff
On Feb 23, 11:22 pm, Stan Schymanski schym...@gmail.com wrote: I get a similar error message after compiling from scratch on Intel Mac OSX 10.4.11. Is this related? I don't think so, the problem might only apply to upgrade. See full report below. Cheers Stan SNIP The linker indicate a

[sage-devel] Re: Sage malloc

2009-02-24 Thread mabshoff
On Feb 24, 12:10 am, Georg S. Weber georgswe...@googlemail.com wrote: On 23 Feb., 18:53, mabshoff mabsh...@googlemail.com wrote: Hi Gerog, Hi Michael, I could not put that much effort into it yesterday evening, but one overnight complete build testlong of Sage 3.3 with a singular

[sage-devel] Re: Sage 3.3 sources are out

2009-02-24 Thread mabshoff
On Feb 24, 12:18 am, Stan Schymanski schym...@gmail.com wrote: Hi Georg and Michael, Hi Stan, Thanks for your help. I use Xcode 2.4.1 only. I suppose I should upgrade then? After upgrading, can I run make again or do I have to delete the directory and start again? Here is my gcc version

[sage-devel] Re: Notebook server as a separate python package?

2009-02-24 Thread mabshoff
On Feb 24, 4:10 am, David Joyner wdjoy...@gmail.com wrote: On Tue, Feb 24, 2009 at 5:58 AM, gidiko gid...@gmail.com wrote: Hi all, Are there plans for a fork of the notebook server as a separate python package not integrated into sage? Seehttp://www.knoboo.com/ That is a different

[sage-devel] Re: I cannot compile 3.3 in gentoo

2009-02-24 Thread mabshoff
On Feb 24, 2:49 am, water waterloo2...@gmail.com wrote: Hi, I can not emerge =dev-lisp/clisp-2.46. Does gentoo patch the clisp sources in any way? below is my install log's last several lines. Ok, thanks. gcc -Igllib -O2 -march=pentium-m -pipe -ggdb -W -Wswitch -Wcomment -

[sage-devel] Re: Sage 3.3 sources are out

2009-02-24 Thread mabshoff
On Feb 24, 1:37 am, Stan Schymanski schym...@gmail.com wrote: Hi Michael, Hi Stan, Thanks a lot for your help, it works now (./sage -ba did it for me). Good, I am not surprised. I should really fix that ticket to check for a minimum amount of space to avoid this happening to other people

[sage-devel] Re: Notebook editing and interactive plotting (jquery?)

2009-02-24 Thread mabshoff
On Feb 24, 5:14 am, Kenny masso.ke...@gmail.com wrote: I've worked with Maurizio and we came out with a working example of a bode diagram plotted into a popup. It is good looking and we would like to shere this code with the community. Is anybode there that feels like to help us posting

[sage-devel] Re: ReST rereading...

2009-02-24 Thread mabshoff
On Feb 23, 2:27 pm, Florent Hivert florent.hiv...@univ-rouen.fr wrote:       Dear All, Hi, Michael suggested on irc to put here some hint about things to look at when checking ReST doc. Here are some thing that I have seen lost in sage-combinat:  - comparison sign outside maths   and

[sage-devel] Re: I cannot compile 3.3 in gentoo

2009-02-24 Thread mabshoff
On Feb 24, 6:53 am, water waterloo2...@gmail.com wrote: Hi, I change to : CFLAGS=-O0 -march=pentium-m -pipe CXXFLAGS=-O0 -march=pentium-m -pipe No, that is not what I wrote. *Unset* them completely since clisp is miscompiled by gcc 4.x if you look at it from the wrong angle. I am

[sage-devel] Re: something went wrong updating the easy-install.pth file

2009-02-24 Thread mabshoff
On Feb 24, 2:25 pm, Mike Hansen mhan...@gmail.com wrote: Hi Ralf, Hi Ralf, On Tue, Feb 24, 2009 at 2:21 PM, Ralf Hemmecke r...@hemmecke.de wrote: -- | Sage Version 3.3, Release Date: 2009-02-21                         |

[sage-devel] Re: ReST rereading...

2009-02-24 Thread mabshoff
On Feb 24, 3:27 pm, Robert Bradshaw rober...@math.washington.edu wrote: On Feb 24, 2009, at 3:07 PM, mabshoff wrote: Hi Robert, On Feb 24, 2:51 pm, Robert Bradshaw rober...@math.washington.edu wrote: On Feb 24, 2009, at 6:01 AM, mabshoff wrote: SNIP How about merging the patches

[sage-devel] Sage 3.4.alpha0 released - ReST patch update

2009-02-24 Thread mabshoff
it will involved touching code in a lot of places. This will also cause doctest failures with make check for example All the bits as usual are in http://sage.math.washington.edu/home/mabshoff/release-cycles-3.4/ No bdist this time - build from sources! Other than that nothing but trivial

[sage-devel] Re: Sage 3.3 build fails at md5 module failed to import

2009-02-25 Thread mabshoff
On Feb 25, 12:30 pm, Amir amirn...@gmail.com wrote: Got the following error: Hi Amir, SNIP export MAKE=make -j1, with the same error. Machine is a node of a heterogeneous cluster of 'Rocks' linux opteron and xeon machines. Ok, any chance you do not have any OpenSSL installed by the

[sage-devel] Re: CUDD

2009-02-25 Thread mabshoff
On Feb 25, 11:34 am, Burcin Erocal bur...@erocal.org wrote: Hi, On Wed, 25 Feb 2009 10:53:48 -0800 William Stein wst...@gmail.com wrote: I received this question from a potential Sage developer.  Any thoughts? Hi William.  I notice that the package Polybori is included with SAGE

[sage-devel] Re: Sage 3.4.alpha0 released - ReST patch update

2009-02-25 Thread mabshoff
On Feb 25, 11:55 am, Jaap Spies j.sp...@hccnet.nl wrote: John Cremona wrote: I get the same two failures as John Palmieri.  This is on Suse linux. John I join the party with the same two failures on Fedora 9 and 10, 32 bits. Jaap Ok, I am in Athens, UGA and ready to work a while

[sage-devel] Re: Sage malloc

2009-02-25 Thread mabshoff
On Feb 24, 9:25 pm, Georg S. Weber georgswe...@googlemail.com wrote: Hi Michael, Hi Georg, this got me a bit high-spirited :) , so I assembled another singular.spkg with some bigger cleanups w.r.t memory allocator usage. I did a complete build with this spkg dropped into Sage 3.3

[sage-devel] Re: #auto is still broken in Sage 3.3

2009-02-25 Thread mabshoff
On Feb 24, 7:17 pm, M. Yurko myu...@gmail.com wrote: OK, upon further inspection, I realized that something must have gone wrong during the upgrade, so I''l just recompile from scratch again. The terminal when I launch sage says 3.3 and version() gives 3.3, but the number below the sage

[sage-devel] Re: I cannot compile 3.3 in gentoo

2009-02-25 Thread mabshoff
On Feb 25, 3:05 am, water waterloo2...@gmail.com wrote: if I need to wait sage 3.4 ? Hi, Sage 3.4 won't fix the issue since it needs to be out by friday at the latest and I will need to work on other things until then. I have thought about this some more and it seems strange that the

[sage-devel] Re: Sage 3.4.alpha0 released - ReST patch update

2009-02-26 Thread mabshoff
On Feb 26, 2:51 am, Georg S. Weber georgswe...@googlemail.com wrote: Hi, Hi Georg, is currently someone working on trac #4933 (lots of files in sage.schemes.elliptic_curves are not included in the reference manual)? Or is it intended to get these missing files' documentation in 3.4 (as

[sage-devel] Re: Cardinality of a set...

2009-02-26 Thread mabshoff
On Feb 26, 5:26 am, Ralf Hemmecke r...@hemmecke.de wrote: Please vote for your favorite names:  - NaturalNumbers  - Naturals  - NaturalIntegers  - NonNegativeIntegers /  - PositiveNaturals  - PositiveIntegers If I'd have a say... then I would choose NonNegativeInteger and

[sage-devel] Re: Sage 3.4.alpha0 released - ReST patch update

2009-02-26 Thread mabshoff
On Feb 26, 8:23 am, Jaap Spies j.sp...@hccnet.nl wrote: mabshoff wrote: Hello folks, this is Sage 3.4.alpha0, more or less on time. We merged a massive number of ReST patches (Mike Hansen) and additionally fixed a number of long standing libSingular issues (Georg Weber, Carl Witty

[sage-devel] Re: Inverse laplace transform and Post integration formula - symbolic derivative?

2009-02-26 Thread mabshoff
) class 'sage.calculus.calculus.SymbolicArithmetic' sage: k 4 Ok, now this wouldn't blow up now, wouldn't it? sage: diff(f,k) --- TypeError Traceback (most recent call last) /home/mabshoff/.sage

[sage-devel] Re: minimum rank worksheet

2009-02-26 Thread mabshoff
On Feb 26, 12:18 pm, Jason Grout jason-s...@creativetrax.com wrote: Jason Grout wrote: Leslie, Hi Jason, I published the minimum rank worksheet at:http://sagenb.org/home/pub/293 The code is in the top block and is hidden by default.  Click on the hide to show it.  It is

[sage-devel] Re: minimum rank worksheet

2009-02-26 Thread mabshoff
On Feb 26, 2:52 pm, Jason Grout jason-s...@creativetrax.com wrote: mabshoff wrote: Hi Jason, I glanced at the code and it seems doctested and documented, so what is the holdup for submission for inclusion? I don't have written permission from one of the authors (but I do have verbal

[sage-devel] Re: I cannot compile 3.3 in gentoo

2009-02-26 Thread mabshoff
On Feb 26, 2:57 pm, François Bissey fbis...@slingshot.co.nz wrote: On Thu, 26 Feb 2009, mabshoff wrote: SNIP Hi Michael, Hi Francois I haven't time to look into that before the release date of sage-3.4, but at least with 3.4 he may have binaries. Ok, AFAIL we (== William me) do

[sage-devel] Re: [sage-combinat-devel] Re: Cardinality of a set...

2009-02-26 Thread mabshoff
On Feb 26, 3:39 pm, Craig Citro craigci...@gmail.com wrote: I don't particularly like s.card(), because the abbreviation is too opaque -- Ah, is it? Hmm, well, maybe. Short poll: who finds card opaque? I think it's pretty opaque. If I was looking for something like size already, I

[sage-devel] Re: help? doesn't work in sage 3.3 notebook

2009-02-27 Thread mabshoff
On Feb 27, 4:24 am, mark mcclure mcmcc...@unca.edu wrote: Hi Mark, The basic help mechanism doesn't seem to work in the the sage 3.3 notebook.  For example, if I type 'plot?' in the Sage 3.2.3 notebook, I get the description of the plot function.  I can also type 'plot?' into the command

[sage-devel] Re: Slowdown in is_isomorphic?

2009-02-27 Thread mabshoff
On Feb 27, 4:44 am, Jason Grout jason-s...@creativetrax.com wrote: mark mcclure wrote: On Feb 26, 11:35 pm, Jason Grout jason-s...@creativetrax.com wrote: What is the Networkx timing?  That seems like the best. That's just straight up NetworkX run independently of Sage. Of course, the

[sage-devel] Re: help? doesn't work in sage 3.3 notebook

2009-02-27 Thread mabshoff
On Feb 27, 5:10 am, mark mcclure mcmcc...@unca.edu wrote: On Feb 27, 7:44 am, mabshoff mabsh...@googlemail.com wrote: Hi Mark, On Feb 27, 4:24 am, mark mcclure mcmcc...@unca.edu wrote: Overall I am tending to disable App bundles for 3.4 per default due to time constraints and get

[sage-devel] Re: I cannot compile 3.3 in gentoo

2009-02-27 Thread mabshoff
On Feb 27, 2:08 am, François Bissey fbis...@slingshot.co.nz wrote: On Fri, 27 Feb 2009, mabshoff wrote: SNIP Ok Michael, I attached a hopefully detailed and thorough snippet. I will see about the vmware image that you and William would like but I make no promise. I thought

[sage-devel] Re: how to link lapack with C

2009-02-27 Thread mabshoff
On Feb 27, 11:53 am, Ondrej Certik ond...@certik.cz wrote: Hi, Hi, I have some C code that uses lapack (http://www.openmx-square.org/) --- how should I link with it in Sage? It depends, C code can either use either Fortran code directly or might rely on a CLapack implementation. In

[sage-devel] Re: non-english chars causing run-time errors in a clone

2009-02-27 Thread mabshoff
On Feb 27, 1:26 pm, John Cremona john.crem...@gmail.com wrote: Hi John, From my newly built 3.4.alpha0 I made a clone but it will not run, complaining about things like this: SyntaxError: Non-ASCII character '\xc3' in file

[sage-devel] Re: spkg dependencies

2009-02-27 Thread mabshoff
On Feb 27, 1:24 pm, Ondrej Certik ond...@certik.cz wrote: SNIP One more question: -- I am trying to take sage-3.3.tar and strip it from unnecessary spkgs that I don't need -- seems to me that I can just delete them? Yes I am learning the dependencies in spkg/standard/deps, because it's

[sage-devel] Re: how to link lapack with C

2009-02-27 Thread mabshoff
On Feb 27, 1:16 pm, Ondrej Certik ond...@certik.cz wrote: On Fri, Feb 27, 2009 at 12:12 PM, mabshoff mabsh...@googlemail.com wrote: SNIP ATLAS does not depends on CBLAS because it uses the CBLAS interface. This should read ATLAS does depends ... obviously ;) But if you need the F77

[sage-devel] Re: Graphviz Spkg build fails (missing malloc)

2009-02-27 Thread mabshoff
On Feb 27, 1:40 pm, David M. Monarres dmmonar...@gmail.com wrote: Hello all, Hi David, The build of  graphviz-2.16.1.p0 with sage 3.3  on Intel Mac fails. The spkg is quite outdated and likely broken in some other way. The current graphviz release is 2.21 IIRC with 2.22 about to be

[sage-devel] Re: spkg dependencies

2009-02-27 Thread mabshoff
On Feb 27, 1:58 pm, Ondrej Certik ond...@certik.cz wrote: On Fri, Feb 27, 2009 at 1:36 PM, mabshoff mabsh...@googlemail.com wrote: SNIP Two points:  * just don't call it Sage I won't. I did not expect you to do that :)  * what license do you want to use for the code from the local

[sage-devel] Re: help? doesn't work in sage 3.3 notebook

2009-02-27 Thread mabshoff
On Feb 27, 2:20 pm, mark mcclure mcmcc...@unca.edu wrote: On Feb 27, 7:44 am, mabshoff mabsh...@googlemail.com wrote: SNIP Hi Mark, Please keep an eye on this for 3.4 I built Sage 3.4.alpha0 today on my MacPro with OSX 10.5.5. I get the same problem; the Traceback message looks pretty

[sage-devel] Re: I cannot compile 3.3 in gentoo

2009-02-27 Thread mabshoff
On Feb 27, 2:30 pm, François Bissey fbis...@slingshot.co.nz wrote: On Sat, 28 Feb 2009, mabshoff wrote: SNIP Hi Francois, I.e. not all Gentoo releases fail when building clisp, i.e. at least one person hanging out in IRC has reported to me that Sage 3.3 just build for him on a 64  bit

[sage-devel] Re: Sage 3.4.alpha0 released - ReST patch update

2009-02-28 Thread mabshoff
On Feb 28, 3:26 am, Georg S. Weber georgswe...@googlemail.com wrote: Hi Michael, it seems that the libgcrypt-1.4.3.p0.spkg in the sage-3.4.alpha0.tar I had downloaded is gzip'ed, not bz2'ed ... Yep, we noticed too and corrected it two days ago. Ironically the problem only happens on OSX

[sage-devel] Re: spkg dependencies

2009-02-28 Thread mabshoff
On Feb 28, 11:27 am, William Stein wst...@gmail.com wrote: On Sat, Feb 28, 2009 at 3:09 AM, Simon King k...@mathematik.uni-jena.de wrote: Hi William, On 28 Feb., 04:49, William Stein wst...@gmail.com wrote: You should use Sage in such cases.  Type  sage: email? for more details.  

[sage-devel] Re: non-english chars causing run-time errors in a clone

2009-02-28 Thread mabshoff
On Feb 28, 5:25 pm, Rob Beezer goo...@beezer.cotse.net wrote: I've had the same problem in a clone of 3.4.alpha0. Seems to perhaps just be  Grobner in singular.py, and Mobius in sloane_functions.py, since I ran a computation successfully after editing those two files. Would a patch

[sage-devel] Re: non-english chars causing run-time errors in a clone

2009-02-28 Thread mabshoff
On Feb 28, 5:27 pm, Ronan Paixão ronanpai...@yahoo.com.br wrote: Personally I'd vote for making all files utf-8 encoded. That would increase accuracy in names and would also enable easier translations for all languages under the sky. Ronan No, we already agreed on not doing that, i.e. I

[sage-devel] Re: Interested in collaborating

2009-02-28 Thread mabshoff
On Feb 28, 5:54 pm, Minh Nguyen nguyenmi...@gmail.com wrote: Hi Fidel, On Sat, Feb 28, 2009 at 5:30 PM, Fidel fidel.barr...@gmail.com wrote: Hello, I'm interested in collaborating to develop sage. I'm mainly interested in doing things for the graph theoretic component of sage. I know

[sage-devel] Re: non-english chars causing run-time errors in a clone

2009-02-28 Thread mabshoff
On Feb 28, 6:07 pm, Minh Nguyen nguyenmi...@gmail.com wrote: Hi Michael, SNIP Hi Minh, A number of the library files under sage/combinat has French texts scattered around them. Some has English texts, followed by their French translation. Yes, I have complained about that a while ago to

[sage-devel] Re: Interested in collaborating

2009-02-28 Thread mabshoff
On Feb 28, 6:26 pm, Minh Nguyen nguyenmi...@gmail.com wrote: Hi Minh, SNIP I would not do that. There is very little of networkX left in Sage - at least for all performance critical things and Sage's graph code has been moving further and further away from it. There should be a lot of

[sage-devel] Re: trouble installing optional spkg gap_packages-4.4.10_6 in sage-3.3

2009-02-28 Thread mabshoff
On Feb 28, 9:17 pm, Alex Ghitza aghi...@gmail.com wrote: Hi, Hi Alex, I was trying to install gap_packages-4.4.10_6 in sage-3.3, but got an error after the download.  It turns out that this optional package hardcodes that it wants gap-4.4.10, and meanwhile we had upgraded to gap-4.4.12.  

[sage-devel] Re: Shared python library or fPIC issue on AMD64

2009-03-01 Thread mabshoff
the libpython2.5.a and turn it into a shared library: mabsh...@sage:/scratch/mabshoff/sage-3.4.alpha0/local/lib/python2.5/ config$ cd foo/ mabsh...@sage:/scratch/mabshoff/sage-3.4.alpha0/local/lib/python2.5/ config/foo$ ar xf ../libpython2.5.a mabsh...@sage:/scratch/mabshoff/sage-3.4.alpha0/local/lib

[sage-devel] Re: Interested in collaborating

2009-03-01 Thread mabshoff
On Mar 1, 7:44 am, Fidel fidel.barr...@gmail.com wrote: Hi Fidel, Sorry for explaining so little about myself. During my undergrad I took 5 courses which involved programming (structured programming, OOP, data structures, computer graphics, cryptography) and a graph theory course. I

[sage-devel] Re: Sage clone not working after upgrade.

2009-03-01 Thread mabshoff
On Mar 1, 9:40 pm, Phaedon Sinis phaedonsi...@gmail.com wrote: Hi Phaedon, I just upgraded my installation of sage, using sage -upgrade, and now my sage-finance-test clone won't work. I followed the directions to run %upgrade, deleted the indicated file manually, and reran it... and it

[sage-devel] Re: bug in plot

2009-03-02 Thread mabshoff
On Mar 2, 6:15 am, Stan Schymanski schym...@gmail.com wrote: Dear all, I get a ZeroDivisionError: float division if I try to plot the following function: var('kab') fun = kab*((2*kab + 1)/(600*kab + 200) - (2*kab + 1)/(400*(kab + 1) + 200*kab))*((400*(kab + 1) + 200*kab)/(2*kab + 1) -

[sage-devel] Re: Sage clone not working after upgrade.

2009-03-02 Thread mabshoff
On Mar 2, 6:09 am, Phaedon Sinis phaedonsi...@gmail.com wrote: Thanks Carl, Hi Phaedon, I am pretty sure I used a relative pathname... No, you didn't: hg_sage.add('/finance/FinanceDate.py') - i.e. don't use the '/' at the start. the only command I typed was the first line. The cd

[sage-devel] Sage 3.4.rc0

2009-03-02 Thread mabshoff
handy for the AWS. Note that we will not do two minor releases between SD 13 and AWS, but get 3.4 out soon and then do 3.4.1 in time for the AWS. The bits are in the usual place in http://sage.math.washington.edu/home/mabshoff/release-cycles-3.4/ Upgrades as well as a sage.math binary is also

[sage-devel] Re: sage 3.3 fails to build (preserving permissions problem)

2009-03-04 Thread mabshoff
On Mar 4, 10:51 am, Ondrej Certik ond...@certik.cz wrote: SNIP Any chance you could build in /tmp instead of /scratch?  You could also try changing the spkg-install for NTL to not have the -p and see what happens. Unfortunately it doesn't allow me to do so --- I need to submit all

[sage-devel] Re: sage 3.3 fails to build (preserving permissions problem)

2009-03-04 Thread mabshoff
On Mar 4, 11:27 am, Ondrej Certik ond...@certik.cz wrote: On Wed, Mar 4, 2009 at 2:02 PM, mabshoff mabsh...@googlemail.com wrote: On Mar 4, 10:51 am, Ondrej Certik ond...@certik.cz wrote: SNIP Any chance you could build in /tmp instead of /scratch?  You could also try changing

[sage-devel] Re: 4ti2 new release 1.3.2

2009-03-04 Thread mabshoff
On Mar 4, 1:58 pm, Nicolas M. Thiery nicolas.thi...@u-psud.fr wrote:         Hi! SNIP I have spkgs glpk-4.28.spkg and 4ti2-1.3.2.spkg at http://sage.math.washington.edu/home/mhansen/that play nice with the Sage ecosystem.  I guess they just need a bit more widespread testing (on

[sage-devel] Re: Sage 3.4.rc0

2009-03-04 Thread mabshoff
On Mar 4, 2:48 pm, Arnaud Bergeron aberge...@gmail.com wrote: Hi Arnaud, This does not build on Mac OS X 10.5.6 PPC 64-bits.  It does build fine in 32-bit mode though The first issue is rather trivial.  The gmp-mpir-0.9 spkg fails to build because spkg-install passes the option ABI=64

[sage-devel] Re: Sage 3.4.rc0

2009-03-04 Thread mabshoff
On Mar 4, 2:59 pm, mabshoff mabsh...@googlemail.com wrote: SNIP Hi Arnaud, I tried adding -mlongcall to the gcc options without success. Yeah, I also found this pagehttp://lists.apple.com/archives/carbon-dev/2007/aug/msg00154.html - for now you might just want to remove the -g from

[sage-devel] Re: sage 3.2.3 os x 10.5 extension loading...

2009-03-06 Thread mabshoff
On Mar 6, 11:29 am, Georg S. Weber georgswe...@googlemail.com wrote: Hi, AFAIK, the patch at trac #5217 (and other paches mentioned there) should have resolved this long standing OS X libpng annoyance --- all that went into Sage 3.3rc1. I'd propose to wait until Sage 3.4 binaries are out,

[sage-devel] Re: should cloning copy documentation output?

2009-03-10 Thread mabshoff
On Mar 10, 11:33 am, John H Palmieri jhpalmier...@gmail.com wrote: Is there a good reason why cloning should not copy the 'output' directory in sage/doc? I can think of lots of good reasons why it *should* be copied... It is a bug. Please open a ticket. There was some discussion about this

[sage-devel] Re: Test failing on ImportError: cannot import name Set...

2009-03-10 Thread mabshoff
On Mar 6, 9:52 am, Nicolas M. Thiery nicolas.thi...@u-psud.fr wrote: On Fri, Mar 06, 2009 at 05:42:17PM +0100, Florent Hivert wrote: I've been stuck an entire day on a problem which may hits you. So I'm putting it there if someone get against it. The problem is the following: Some

[sage-devel] Re: Question about determinants failing over GF(2)

2009-03-10 Thread mabshoff
On Mar 4, 11:13 am, Jonathan Hanke jonha...@gmail.com wrote: Hi, Hi John, I'm getting a strange error message in the library that I'm having trouble reproducing at the prompt for determinants over GF(2).  The full commands to create the message are below, using the sage in

[sage-devel] Sage 3.4 sources released

2009-03-12 Thread mabshoff
Hello folks, after more delay than hoped for here goes the final 3.4. Sources are available from http://www.sagemath.org/src/ Upgrading Sage via the official channel also works already. There is also a sage.math only binary in http://sage.math.washington.edu/home/mabshoff/release-cycles

[sage-devel] Re: Sage 3.4 sources released

2009-03-12 Thread mabshoff
On Mar 12, 12:35 am, Jason Grout jason-s...@creativetrax.com wrote: mabshoff wrote: #5220: Jason Grout: Weird or non-appearance of default in input_box in interact [Reviewed by William Stein] William should get credit for this as well.  I think it'd be best to list us both as authors

[sage-devel] Re: Error installing sage on Mac OSX 10.4.11 [cython]

2009-03-12 Thread mabshoff
fat chat, member, , no email, allowed, 2006, 11, 1, 18, 24, 35 wrote: Hi, Build is not working, here are some details: SNIP What are you trying to do? Build from sources? Then something went very wrong since Cython not working is a serious failure earlier and you should have never gotten

[sage-devel] Re: http://hg.sagemath.org/sage-main/

2009-03-12 Thread mabshoff
On Mar 12, 3:00 am, Martin Albrecht m...@informatik.uni-bremen.de wrote: Hi there, Hi Martin, it seems    http://hg.sagemath.org/sage-main/ is out of date. Yeah, William and I started looking into fixing this last night, but we didn't get it done before having to take off. I am not

[sage-devel] Re: Sage 3.4 sources released

2009-03-12 Thread mabshoff
On Mar 12, 2:25 pm, M. Yurko myu...@gmail.com wrote: Hi, I'm running 64-bit Ubuntu 8.10 on a Core 2 processor, and Sage 3.4 has failed to build for me twice on the same error. It appears to occur on the compilation of PolyBoRi and I get the following error:

[sage-devel] Sage 3.4 binaries are mostly available

2009-03-13 Thread mabshoff
Hello folks, the download section of sagemath.org has over 20 different 3.4 binaries available. So far the only uptodate mirror is sage.math.washington.edu while the other mirrors are catching up, so please check your local mirror before hitting the main download site. I am working on the

[sage-devel] Re: 4ti2 problem

2009-03-14 Thread mabshoff
On Mar 14, 11:12 am, David Perkinson dav...@reed.edu wrote: Using Sage 3.4, sage -i 4ti2-20061025 does not work for me.  I have attached the relevant section of install.log. Dave Somewhere in 4ti2 you need to #include limits.h to work around gcc 4.3 header problems. I guess someone

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