[spctools-discuss] Re: ReadW and Orbitrap Exactive output files

2009-11-16 Thread Andris Jankevics
Hi Matt and Dominik, thank you for replay. As I understand data have 4 scanfilters: 1) negative with lockmass, 2) negative raw, 3) positive with lockmass, and 4) positive raw. Functions 1 and 3 are corrected to lockmass signal (no like in Water's, just lock scans ), and 2,4 raw data. {1;1}

[spctools-discuss] Re: ReadW and Orbitrap Exactive output files

2009-11-16 Thread Matthew Chambers
If you could upload the data I'll take a crack at it. So if in {x;y} the y refers to the scan event, what does the x refer to? Method segment? If you need a server to upload it to:

[spctools-discuss] Re: building on windows

2009-11-16 Thread Bill Nelson
Okay, I got a little side tracked but I'm back. I'm not a C++ programmer so I don't think I'll be much help maintaining the VS8 build. I'm using VS8 because in the past this was the easiest way for me to build the TPP on windows and from the perspective of a Java programmer it is difficult for me

[spctools-discuss] Re: building on windows

2009-11-16 Thread Brian Pratt
Bill, Agreed, it's bad when the docs get stale. I'll update that windows readme. As to the IDE, I'm with you but the bulk of the TPP developers are linux folk. Brian On Mon, Nov 16, 2009 at 9:13 AM, Bill Nelson nelson...@gmail.com wrote: Okay, I got a little side tracked but I'm back. I'm

[spctools-discuss] Re: ReadW and Orbitrap Exactive output files

2009-11-16 Thread Andris Jankevics
Hi, I didn't succeed to connect to TPP ftp server, so I uploaded file there: http://bars.rug.nl/download/26c8814e3cb2770d In this example {x;y}, x is not changing, it is always 1. But y is 1 or 2, and depends on polarity. Thanks and best regards, Andris On Mon, Nov 16, 2009 at 6:02 PM,

[spctools-discuss] Re: ReadW and Orbitrap Exactive output files

2009-11-16 Thread Matthew Chambers
That file requires Xcalibur 2.1, which doesn't run on Windows 7 x64...I had to use a Windows VM to view it. It indeed appears they've put scan segment and scan event in the filter line, and have added a new keyword (lock). The lock keyword appears to only be applied if at least one of the

[spctools-discuss] Re: building on windows

2009-11-16 Thread Bill Nelson
Can you tell me how to extract the external libs manually or how to troubleshoot the makefile? Thanks, Bill On Nov 16, 1:34 pm, Brian Pratt brian.pr...@insilicos.com wrote: Bill, Agreed, it's bad when the docs get stale.  I'll update that windows readme. As to the IDE, I'm with you but the

[spctools-discuss] Re: building on windows

2009-11-16 Thread Brian Pratt
Try opening a command window, cd to the extern directory, and run build_boost_vc8.bat Should have happened automatically, I wonder what's up. Brian On Mon, Nov 16, 2009 at 12:27 PM, Bill Nelson nelson...@gmail.com wrote: Can you tell me how to extract the external libs manually or how to