That file requires Xcalibur 2.1, which doesn't run on Windows 7 x64...I
had to use a Windows VM to view it. It indeed appears they've put scan
segment and scan event in the filter line, and have added a new keyword
("lock"). The lock keyword appears to only be applied if at least one of
the configured lock masses was found in the spectrum, in which case some
adjustment has been applied; otherwise, it won't have the lock keyword
and no adjustment is applied. It shouldn't be difficult to add support
for these changes, although I'm curious what you're planning to do with
this data once it's in mzXML format.
-Matt
Andris Jankevics wrote:
> Hi, I didn't succeed to connect to TPP ftp server, so I uploaded file there:
> http://bars.rug.nl/download/26c8814e3cb2770d
>
> In this example {x;y}, x is not changing, it is always 1. But y is 1
> or 2, and depends on polarity.
>
>
> Thanks and best regards,
> Andris
>
> On Mon, Nov 16, 2009 at 6:02 PM, Matthew Chambers
> <[email protected]> wrote:
>
>> If you could upload the data I'll take a crack at it. So if in {x;y} the
>> y refers to the scan event, what does the x refer to? Method segment?
>>
>> If you need a server to upload it to:
>> http://tools.proteomecenter.org/wiki/index.php?title=TPP:Frequently_Asked_Questions#How_do_I_upload_files_to_the_SPC_tools_team.3F
>>
>> Also, SPC tools team, how do I access that server? :P
>>
>> -Matt
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