Hi there again

I am using Thermo's Proteome Discover to do some testing with SEQUEST
searches. You can input a RAW file or an mzXML for the search, and
Discoverer handles the rest.

mzXMLs produced with ReAdW 4.0.2 work just fine.
mzXMLs produced with ReAdW 4.3.1 do *not* work.
mzXMLs produced with msconvert do *not* work.

Discoverer says that they are invalid mzXML files and does not load
them. Any thoughts? Anyone else using ReAdW and Discoverer? Is this
more likely to be a problem with ReAdW/msconvert or with Discoverer?

MzXML2Search seems to be able to handle the different mzXMLs just
fine.


Jeff


TPP 4.4 (winxp install)
Thermo Proteome Discoverer 1.2

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