I'm using TPP v4.4 VUVUZELA rev 1, Build 201010121551 (MinGW) to convert wiff raw data to mzXML. The command executed in TPP was
c:\Inetpub\tpp-bin\mzWiff -v --mzXML -c1 -g -G --Analyst c:/Inetpub/ wwwroot/ISB/data/my_fullscan.wiff. An excerpt of the output is shown below: <scan num="1" msLevel="1" peaksCount="140" polarity="+" scanType="Q1 Scan" retentionTime="PT0.001S" lowMz="106.7" highMz="1206.8" basePeakMz="115.9" basePeakIntensity="3.24903e+006" totIonCurrent="3.06962e+007" > </scan> I wonder if I could use some sort of advanced option (that I'm not aware of) to extract info (mz, intensity and retention time) for ALL the peaks contained in the wiff file rather than for the base peak only (shown above). If this is not feasible using mzWiff, are there other tools available to do what I needed? Any advice would be greatly appreciated. Bob -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
