Those zero's are padded scan numbers but your .out file names are fine too. At this point, I'm not sure if anyone can give you any advice w/o seeing your data. If you want, zip up that directory of out files and send it to me and I'll take a look.
On Tue, Mar 1, 2011 at 2:35 PM, Ruby <[email protected]> wrote: > Hi Jimmy- > > The directory does have the .out files (as that is what I thought I > needed to use for the pepXML conversion). Please correct me if I'm > wrong... > I just looked through several of the data directories that I have > tried and received this error for, and I don't have any files with the > repeating zeros like that, but the do look like this: > > (i selected several) > > RG_81_2.11179.11179.2 > RG_81_2.14447.14447.2 > RG_81_2.271.271.2 > > Thank! > Ruby > > > On Mar 1, 4:08 pm, Jimmy Eng <[email protected]> wrote: >> Ruby, >> >> The problem likely has nothing to do with the -Etrypsin option in the >> Out2XML command. Do you have a bunch of *.out files in the directory >> c:\Inetpub\wwwroot\ISB\data\RG_81_2\ >> >> Are those files named something like RG_81_2.00001.00001.1.out? >> >> - Jimmy -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
