In theory it should work under nmake -- but I won't unleash this on anyone without extensively testing it first. Hopefully someone else has a solution, otherwise you could piece together a .bat file pretty easily by looking at the commands issued in petunia.
-Joe On Wed, Aug 3, 2011 at 11:15 AM, John Bryant <[email protected]>wrote: > In Windows 7 > > On Aug 3, 1:31 pm, Joseph Slagel <[email protected]> > wrote: > > Windows or Unix? A long time ago I played around with a Makefile that > would > > run the process, and had the added benefit of "knowing" when to rerun > > certain parts when files changed (such as edits to parameters). > > > > -Joe > > > > > > > > > > > > > > > > On Wed, Aug 3, 2011 at 7:21 AM, John Bryant <[email protected]> > wrote: > > > Does anyone have a script that automatically runs the entire TPP > > > process from converting .RAW files from the mass spectrometer to > > > identify the proteins using protein prophet? > > > I have used the TPP for a while and I don't like having to wait for > > > each step to finish before I manually initiate the next step of the > > > process. > > > > > -- > > > You received this message because you are subscribed to the Google > Groups > > > "spctools-discuss" group. > > > To post to this group, send email to [email protected] > . > > > To unsubscribe from this group, send email to > > > [email protected]. > > > For more options, visit this group at > > >http://groups.google.com/group/spctools-discuss?hl=en. > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
