Hi everyone,
I am new to tpp and I am using it from the command line under ubuntu
64. I installed tpp version 4.4.1 and I am trying to run
PeptideProphetParser on pep.xml files I obtained from Xtandem as well
as from SpectraST. I am getting the following error massage:
---
Error: file update failed, check file xxxxxx.xml.tmp.p90S6j for
completeness
error: no peptideprophet data written to file xxxxxx.xml
---
The tmp file seems to be complete and all the needed results from
peptideprophet are in there! I checked the permission and everything
should be ok. can anyone help? does anyone encounter similar error?

thanks in advance for your answer(s),
Yassene

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